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The map label for this gene is 108562893

Identifier: 108562893

GI number: 108562893

Start: 484283

End: 485119

Strand: Reverse

Name: 108562893

Synonym: HPAG1_0468

Alternate gene names: NA

Gene position: 485119-484283 (Counterclockwise)

Preceding gene: 108562896

Following gene: 108562892

Centisome position: 30.39

GC content: 35.36

Gene sequence:

>837_bases
ATGGAACGTTCGCTTATTTTTAAAAAAGTTAGAGTTTATTCTAAAATGCTAGTGGCTTTAGGGCTTTCAAGCGTGTTAAT
CGGTTGTGCGATGAATCCAAGCGCTGAAACAAAAAAACCAAATGACGCCAAAAATCAAGTTCAAACTCATGAAAGAATAC
AAACAAGCTCTGAACATGTTACGCCGCTAGATTTTAATTATCCGATACATATTGTTCAAGCCCCACAAAACCATCATGTT
GTAGGTATTTTAATGCCACGCATTCAAGTGAGCGATAATCTAAAGCCCTATATTGATAAGTTTCAAGACGCTTTAGCCAA
TCAAATCCAAACTATTTTTGAAAAAAGAGGCTATCAAGTGTTGCGTTTTCAAGATGAAAAAGCTTTGAGTACGCAAGATA
AGAGAAAGATTTTTTCCGTTTTGGATTTGAAAGGGTGGGTAGGGATCTTAGAAGATTTGAAAATGAATGTAAAAGATCCC
AATAATCCTAATTTAGACACGCTAGTGGATCAAAGCTCAGGCTCTGTGTGGTTTAATTTTTATGAGCCAGAAAGCAATCG
TGTAGTCCATGATTTTGCTGTGGAAGTAGGGACTTTTCAGGCAATGACCTACACTTACAAACACAGTAATTCTGGAGGGT
TTGATTCTTCAAACAGCATTATCCATGAAAATTTAGAAAAGAATAAAGAAGATGCGATACATAAGATCTTAAACAGAATG
TATGCGGTTGTCATGAAAAAAGCTGTAACAGAACTTACAAAAGAAAATATTGCCAAATACCGAGACACTATTGATAGAAT
GAAAGGCTTTAAAAGTTCTATGCCTCAAAAAAAGTAG

Upstream 100 bases:

>100_bases
AAATTTAGAAAAAAAGAAAATTGTAGCGCAAATTGATTTACTTAAAAATAGCATGAATAGGGTAGAACAGAAGTCTATTT
TAATTTTATAGGAGTTTTTT

Downstream 100 bases:

>100_bases
TTCTTAAACGAACCATTTAAAAATTAGCCTTAAAATCAGTCTTTTTAAAGGCTATTTTAAGTATAATGCAAAGTTTATTT
CAATAATTAAGGATACACAA

Product: neuraminyllactose-binding hemagglutinin

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MERSLIFKKVRVYSKMLVALGLSSVLIGCAMNPSAETKKPNDAKNQVQTHERIQTSSEHVTPLDFNYPIHIVQAPQNHHV
VGILMPRIQVSDNLKPYIDKFQDALANQIQTIFEKRGYQVLRFQDEKALSTQDKRKIFSVLDLKGWVGILEDLKMNVKDP
NNPNLDTLVDQSSGSVWFNFYEPESNRVVHDFAVEVGTFQAMTYTYKHSNSGGFDSSNSIIHENLEKNKEDAIHKILNRM
YAVVMKKAVTELTKENIAKYRDTIDRMKGFKSSMPQKK

Sequences:

>Translated_278_residues
MERSLIFKKVRVYSKMLVALGLSSVLIGCAMNPSAETKKPNDAKNQVQTHERIQTSSEHVTPLDFNYPIHIVQAPQNHHV
VGILMPRIQVSDNLKPYIDKFQDALANQIQTIFEKRGYQVLRFQDEKALSTQDKRKIFSVLDLKGWVGILEDLKMNVKDP
NNPNLDTLVDQSSGSVWFNFYEPESNRVVHDFAVEVGTFQAMTYTYKHSNSGGFDSSNSIIHENLEKNKEDAIHKILNRM
YAVVMKKAVTELTKENIAKYRDTIDRMKGFKSSMPQKK
>Mature_278_residues
MERSLIFKKVRVYSKMLVALGLSSVLIGCAMNPSAETKKPNDAKNQVQTHERIQTSSEHVTPLDFNYPIHIVQAPQNHHV
VGILMPRIQVSDNLKPYIDKFQDALANQIQTIFEKRGYQVLRFQDEKALSTQDKRKIFSVLDLKGWVGILEDLKMNVKDP
NNPNLDTLVDQSSGSVWFNFYEPESNRVVHDFAVEVGTFQAMTYTYKHSNSGGFDSSNSIIHENLEKNKEDAIHKILNRM
YAVVMKKAVTELTKENIAKYRDTIDRMKGFKSSMPQKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31851; Mature: 31851

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERSLIFKKVRVYSKMLVALGLSSVLIGCAMNPSAETKKPNDAKNQVQTHERIQTSSEHV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
TPLDFNYPIHIVQAPQNHHVVGILMPRIQVSDNLKPYIDKFQDALANQIQTIFEKRGYQV
CEECCCCCEEEEECCCCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEE
LRFQDEKALSTQDKRKIFSVLDLKGWVGILEDLKMNVKDPNNPNLDTLVDQSSGSVWFNF
EEECCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEECCCCCEEEEE
YEPESNRVVHDFAVEVGTFQAMTYTYKHSNSGGFDSSNSIIHENLEKNKEDAIHKILNRM
ECCCCCCCHHHHHHHHHCEEEEEEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHH
YAVVMKKAVTELTKENIAKYRDTIDRMKGFKSSMPQKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MERSLIFKKVRVYSKMLVALGLSSVLIGCAMNPSAETKKPNDAKNQVQTHERIQTSSEHV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
TPLDFNYPIHIVQAPQNHHVVGILMPRIQVSDNLKPYIDKFQDALANQIQTIFEKRGYQV
CEECCCCCEEEEECCCCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEE
LRFQDEKALSTQDKRKIFSVLDLKGWVGILEDLKMNVKDPNNPNLDTLVDQSSGSVWFNF
EEECCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEECCCCCEEEEE
YEPESNRVVHDFAVEVGTFQAMTYTYKHSNSGGFDSSNSIIHENLEKNKEDAIHKILNRM
ECCCCCCCHHHHHHHHHCEEEEEEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHH
YAVVMKKAVTELTKENIAKYRDTIDRMKGFKSSMPQKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA