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The map label for this gene is srpA [H]

Identifier: 108562886

GI number: 108562886

Start: 473986

End: 474930

Strand: Reverse

Name: srpA [H]

Synonym: HPAG1_0461

Alternate gene names: 108562886

Gene position: 474930-473986 (Counterclockwise)

Preceding gene: 108562891

Following gene: 108562878

Centisome position: 29.75

GC content: 39.89

Gene sequence:

>945_bases
ATGAAAAGAATTGGTTTGAGCTTGGGTTTGGTTTTGAGTTTGGGTTTTTTAAAAGCCCATGAAGTGAGTGCTGAAGAGAT
TGCGGACATTTTCTACAAGCTCAACGCCAAAGAGCCTAAAATGAAAATCAACCACACTAAGGGGTTTTGCGCTAAAGGCG
TGTTCCTCCCTAATGCGCAAGCAAGAGAGGATTTAGATGTGCCATTACTCAATGAAAAAGAAATCCCTGCATCTGTAAGG
TATTCTTTAGGAGGCGTGGCAATGGACGATAAAAGCAAAGTTAGAGGCATGGCGTTAAAATTAGAAAACCAAAACGCTAG
CTGGACAATGGTGATGCTCAATACAGAAATCAATTTTGCCAAAAACCCTAACGAATTCGCCCAATTTTTTGAAATGAGAC
TTCCTAAAAATGGCAAGGTGGATGAAGCAAGAATCAAAAAGCTTTACGAAGAAGTCCCCTCTTATAGGAATTTTGCCACC
TATATGAAAACGATAGGGATCAGCTCAAGCGTGGCTAACACGCCTTATTATAGCGTGCATGCGTTCAGGTTTAAAGATAA
GAAAGAAAAATTATTGCATGCGAGATGGAAATTTGTGCCTAAAGACGGCATTAAGTATCTTAACCCCCAAGAATTAAAGC
AAAAAGATTCAAATTATCTGCTTTCTTCATTCCAACAACACCTTAAAACTAAGCCCATAGAATACCAAATGTATCTGGTG
TTTGCGAATAAAAATGATGCCACCAACGACACGACCGCGCTTTGGAAGGGCAAACACAAGGAATTATTAATAGGGACCTT
GAAAGTTGAAAAATACGAAGGAATGGGTTGCAATAAAGATGTGTATTTCCCAGCCGATCTCCCTAAAGGCGTAGAAGCCC
CTACTGATCCCTTATTCCAAATCAGGAATGAAGTTTATGGGATCACTTTTAGCAGGAGGCAATAA

Upstream 100 bases:

>100_bases
TAATAATATATTGAAAAAAAGGCTTTTTTAAGGCTCAATAGGGAATTTACTGATACAATAAAAAGCGTTGTTTTATATAA
AAAAATAATAAGGATCAAGA

Downstream 100 bases:

>100_bases
AAAGGCTAAGGCCAATCAAAATATAAGGGGGGAGTGGGATTTTTGCTTAAAGCTTTTAAGCGCACCCACTAAAACACTTC
CTCTCTTATTTGAGGCACAC

Product: catalase like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKRIGLSLGLVLSLGFLKAHEVSAEEIADIFYKLNAKEPKMKINHTKGFCAKGVFLPNAQAREDLDVPLLNEKEIPASVR
YSLGGVAMDDKSKVRGMALKLENQNASWTMVMLNTEINFAKNPNEFAQFFEMRLPKNGKVDEARIKKLYEEVPSYRNFAT
YMKTIGISSSVANTPYYSVHAFRFKDKKEKLLHARWKFVPKDGIKYLNPQELKQKDSNYLLSSFQQHLKTKPIEYQMYLV
FANKNDATNDTTALWKGKHKELLIGTLKVEKYEGMGCNKDVYFPADLPKGVEAPTDPLFQIRNEVYGITFSRRQ

Sequences:

>Translated_314_residues
MKRIGLSLGLVLSLGFLKAHEVSAEEIADIFYKLNAKEPKMKINHTKGFCAKGVFLPNAQAREDLDVPLLNEKEIPASVR
YSLGGVAMDDKSKVRGMALKLENQNASWTMVMLNTEINFAKNPNEFAQFFEMRLPKNGKVDEARIKKLYEEVPSYRNFAT
YMKTIGISSSVANTPYYSVHAFRFKDKKEKLLHARWKFVPKDGIKYLNPQELKQKDSNYLLSSFQQHLKTKPIEYQMYLV
FANKNDATNDTTALWKGKHKELLIGTLKVEKYEGMGCNKDVYFPADLPKGVEAPTDPLFQIRNEVYGITFSRRQ
>Mature_314_residues
MKRIGLSLGLVLSLGFLKAHEVSAEEIADIFYKLNAKEPKMKINHTKGFCAKGVFLPNAQAREDLDVPLLNEKEIPASVR
YSLGGVAMDDKSKVRGMALKLENQNASWTMVMLNTEINFAKNPNEFAQFFEMRLPKNGKVDEARIKKLYEEVPSYRNFAT
YMKTIGISSSVANTPYYSVHAFRFKDKKEKLLHARWKFVPKDGIKYLNPQELKQKDSNYLLSSFQQHLKTKPIEYQMYLV
FANKNDATNDTTALWKGKHKELLIGTLKVEKYEGMGCNKDVYFPADLPKGVEAPTDPLFQIRNEVYGITFSRRQ

Specific function: Unknown

COG id: COG0753

COG function: function code P; Catalase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the catalase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020835
- InterPro:   IPR018028
- InterPro:   IPR011614 [H]

Pfam domain/function: PF00199 Catalase [H]

EC number: NA

Molecular weight: Translated: 35982; Mature: 35982

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIGLSLGLVLSLGFLKAHEVSAEEIADIFYKLNAKEPKMKINHTKGFCAKGVFLPNAQ
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCCEECCEECCCCC
AREDLDVPLLNEKEIPASVRYSLGGVAMDDKSKVRGMALKLENQNASWTMVMLNTEINFA
CCCCCCCCCCCCCCCCCHHHHCCCCEEECCHHHHCEEEEEEECCCCEEEEEEEECCCCCC
KNPNEFAQFFEMRLPKNGKVDEARIKKLYEEVPSYRNFATYMKTIGISSSVANTPYYSVH
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEE
AFRFKDKKEKLLHARWKFVPKDGIKYLNPQELKQKDSNYLLSSFQQHLKTKPIEYQMYLV
EEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEE
FANKNDATNDTTALWKGKHKELLIGTLKVEKYEGMGCNKDVYFPADLPKGVEAPTDPLFQ
EECCCCCCCCCHHHCCCCCCEEEEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCHHHH
IRNEVYGITFSRRQ
HHHHHEEEEEECCC
>Mature Secondary Structure
MKRIGLSLGLVLSLGFLKAHEVSAEEIADIFYKLNAKEPKMKINHTKGFCAKGVFLPNAQ
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCCEECCEECCCCC
AREDLDVPLLNEKEIPASVRYSLGGVAMDDKSKVRGMALKLENQNASWTMVMLNTEINFA
CCCCCCCCCCCCCCCCCHHHHCCCCEEECCHHHHCEEEEEEECCCCEEEEEEEECCCCCC
KNPNEFAQFFEMRLPKNGKVDEARIKKLYEEVPSYRNFATYMKTIGISSSVANTPYYSVH
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEE
AFRFKDKKEKLLHARWKFVPKDGIKYLNPQELKQKDSNYLLSSFQQHLKTKPIEYQMYLV
EEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEE
FANKNDATNDTTALWKGKHKELLIGTLKVEKYEGMGCNKDVYFPADLPKGVEAPTDPLFQ
EECCCCCCCCCHHHCCCCCCEEEEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCHHHH
IRNEVYGITFSRRQ
HHHHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]