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The map label for this gene is 108562850

Identifier: 108562850

GI number: 108562850

Start: 433164

End: 434000

Strand: Reverse

Name: 108562850

Synonym: HPAG1_0425

Alternate gene names: NA

Gene position: 434000-433164 (Counterclockwise)

Preceding gene: 108562851

Following gene: 108562848

Centisome position: 27.19

GC content: 37.87

Gene sequence:

>837_bases
GTGCATTCAAAAACCCTTTTACTAGACATTGATTGCGTGATCCCTAATATTGTTAGGCGTTTGCTCTCTAATAAAACGCT
CCCTAAAAGATTCGCCGTTTACAGCTTGCAAGAAGTGGGCGTTATTTTTCTCACCACTCAAATTTTATCCATCATGCGCA
AAACCCGTTGCTCTAAAACGCTTTTTTTTATCACTAGGGGCAGAGAGAGTTTCCGCTACCAGCTGTGCGATCATTACAAA
CAAAAACGCCACCAATTTGATGAAGATTTTAGATCCCTTTTAAAAGCTCTCAAAATCGCTTTAGTGGAAAAATACCCCCT
AAAAAAAGGGGCTAAAATCCAGGGCGAACATTGTTTTGAATATGAAGCCGATGATATTATCTCTTTTTACAAAAAGAAAG
ACCCCAACAATTATGTGATAGCCAGCATGGATAAGGATATTTTGTATTCCAATAGAGGTTCTCATTTCAATCTCAAAACC
AACGCTTTTTTTAATGTGAGTCAAAAAGAGGCTCATTTTTTTGCTTATTACCAGTGCATTGTGGGGGATAAGGGGGATAA
TATTAAGGGGGTTAAAGGGATTGGCGGCTTCAACTATAAAGATTTTTTGAACGAAGACGCTAAAGAGCATGAATTGTGGG
AGCAGATCATTCAAGCGTTCAAAATTAAAGAAGATTTGAGCGACAGCGAAGCTAAAGAAAAGGCTCTTTTAAACATGCGT
TTAGTCAATATGCACCAGATGACCCACCATGGCGTGATCAAACTATGGGAACCTGAGTTCAAAAAAACTTTTTTCCCTAA
AAAACCCCAAAGACCTGATTTTAAAAGAAGTTTTTAA

Upstream 100 bases:

>100_bases
TATTATTTGCTATATATTTGCTATAATAGTTTAACTTTTAAAAAAGTGAAATTCAATTTAAGGATTAACCATTAGACAAG
CGTTTAACAAGGCAAGGTTT

Downstream 100 bases:

>100_bases
AACATTTTTAAAACAAAAACTTCCCAAAAAAGACAAAAGAACTATTCCCAAGACTTTTTCTCGTGGCTTTAGAATTGTAA
GCATACACATACCCCCCACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MHSKTLLLDIDCVIPNIVRRLLSNKTLPKRFAVYSLQEVGVIFLTTQILSIMRKTRCSKTLFFITRGRESFRYQLCDHYK
QKRHQFDEDFRSLLKALKIALVEKYPLKKGAKIQGEHCFEYEADDIISFYKKKDPNNYVIASMDKDILYSNRGSHFNLKT
NAFFNVSQKEAHFFAYYQCIVGDKGDNIKGVKGIGGFNYKDFLNEDAKEHELWEQIIQAFKIKEDLSDSEAKEKALLNMR
LVNMHQMTHHGVIKLWEPEFKKTFFPKKPQRPDFKRSF

Sequences:

>Translated_278_residues
MHSKTLLLDIDCVIPNIVRRLLSNKTLPKRFAVYSLQEVGVIFLTTQILSIMRKTRCSKTLFFITRGRESFRYQLCDHYK
QKRHQFDEDFRSLLKALKIALVEKYPLKKGAKIQGEHCFEYEADDIISFYKKKDPNNYVIASMDKDILYSNRGSHFNLKT
NAFFNVSQKEAHFFAYYQCIVGDKGDNIKGVKGIGGFNYKDFLNEDAKEHELWEQIIQAFKIKEDLSDSEAKEKALLNMR
LVNMHQMTHHGVIKLWEPEFKKTFFPKKPQRPDFKRSF
>Mature_278_residues
MHSKTLLLDIDCVIPNIVRRLLSNKTLPKRFAVYSLQEVGVIFLTTQILSIMRKTRCSKTLFFITRGRESFRYQLCDHYK
QKRHQFDEDFRSLLKALKIALVEKYPLKKGAKIQGEHCFEYEADDIISFYKKKDPNNYVIASMDKDILYSNRGSHFNLKT
NAFFNVSQKEAHFFAYYQCIVGDKGDNIKGVKGIGGFNYKDFLNEDAKEHELWEQIIQAFKIKEDLSDSEAKEKALLNMR
LVNMHQMTHHGVIKLWEPEFKKTFFPKKPQRPDFKRSF

Specific function: Unknown

COG id: COG0258

COG function: function code L; 5'-3' exonuclease (including N-terminal domain of PolI)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32799; Mature: 32799

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSKTLLLDIDCVIPNIVRRLLSNKTLPKRFAVYSLQEVGVIFLTTQILSIMRKTRCSKT
CCCCEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCE
LFFITRGRESFRYQLCDHYKQKRHQFDEDFRSLLKALKIALVEKYPLKKGAKIQGEHCFE
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
YEADDIISFYKKKDPNNYVIASMDKDILYSNRGSHFNLKTNAFFNVSQKEAHFFAYYQCI
CCHHHHHHHHHCCCCCCEEEEECCCHHHCCCCCCEEEEECCEEEECCHHHHHHEEEEEEE
VGDKGDNIKGVKGIGGFNYKDFLNEDAKEHELWEQIIQAFKIKEDLSDSEAKEKALLNMR
ECCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LVNMHQMTHHGVIKLWEPEFKKTFFPKKPQRPDFKRSF
HHHHHHHHHCCEEEEECCHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHSKTLLLDIDCVIPNIVRRLLSNKTLPKRFAVYSLQEVGVIFLTTQILSIMRKTRCSKT
CCCCEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCE
LFFITRGRESFRYQLCDHYKQKRHQFDEDFRSLLKALKIALVEKYPLKKGAKIQGEHCFE
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
YEADDIISFYKKKDPNNYVIASMDKDILYSNRGSHFNLKTNAFFNVSQKEAHFFAYYQCI
CCHHHHHHHHHCCCCCCEEEEECCCHHHCCCCCCEEEEECCEEEECCHHHHHHEEEEEEE
VGDKGDNIKGVKGIGGFNYKDFLNEDAKEHELWEQIIQAFKIKEDLSDSEAKEKALLNMR
ECCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LVNMHQMTHHGVIKLWEPEFKKTFFPKKPQRPDFKRSF
HHHHHHHHHCCEEEEECCHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA