| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is acsA [H]
Identifier: 108562827
GI number: 108562827
Start: 410346
End: 412334
Strand: Reverse
Name: acsA [H]
Synonym: HPAG1_0402
Alternate gene names: 108562827
Gene position: 412334-410346 (Counterclockwise)
Preceding gene: 108562830
Following gene: 108562814
Centisome position: 25.83
GC content: 41.63
Gene sequence:
>1989_bases ATGCAATTAGACGATGATTTGGAATTCGCTAAAAAAATCTTTAACCCTAACAGAGCGTTTGCCAAGCAAGCCAGGATTAA AAACATGTGCGAATATAAAGATTTAGTGCATGAAGCCAATGAAGATTATGAACATTTTTGGGGCGAGTTAGCCAAGCAAA AACTCACATGGTTTAAACCTTTTGATAAGGTTTTAAACAGCGATAACGCCCCTTTTTTCAAATGGTTTGAAAACGGCAAG ATCAATGTTTCTTACAATTGCATAGACAGGCATTTAAAAGACAAAAAAAATAAAGTGGCGATCATTTTTGAAGGGGAAAT GGGGGATTATAATGTCATCACTTACAGAAAACTCCACTCTGAAGTCAATAAAACAGCCAACCTTTTAAAAAACGAATTCA ATGTCAAAAAAGGCGATAGAGTCATTATCTATATGCCTATGATTGTAGAAAGCGTTTATATGATGCTCGCATGCGCTAGG ATTGGAGCGATCCATAGCATCGTTTTTGCTGGGTTTAGCCCTGAAGCCTTAAGGGATAGGATCAACGACGCTCAAGCTAA ATTAGTTATCACAGCGGACGGGACTTTTAGAAAAGGCAAACCTTATATGCTCAAGCCAGCCCTTGACAAGGCTCTAGAAA ATAACGCCTGCCCTAGCGTGGAAAAAGCGCTCATTGTGATACGAAACGCCAAAGAGATTGACTATGTGAGAGGGCGCGAT TTTGTCTATAATGAAATGGTCAATTACCAATCCGATAAATGCGAGCCTGAAATGATGGACTCTGAAGATCCTTTATTCTT GCTCTATACAAGCGGATCAACCGGAAAGCCTAAAGGCGTTCAACACAGCAATGCAGGGTATTTGCTATGGGCGCAAATGA CGATGGAGTGGGTTTTTGATATTAGAGATAACGATAATTTTTGGTGCACCGCTGATATTGGCTGGATCACAGGGCACACT TATGTGGTTTATGGGCCCTTAGCTTGTGGGGCGACAACTTTGATACTAGAAGGCACGATGTCTTATCCGGATTATGGAAG ATGGTGGAGAATGATAGAAGAATACCGCGTGGATAAATTCTACACTTCCCCCACTGCTATAAGAATGCTGCATGCCAAAG GCGAAAACGAACCCTTAAAGTATAATTTAGAGTCACTCAAAGTTTTAGGAACGGTAGGAGAGCCCATTAACCCTACGGCA TGGAAATGGTTTTATGAAAAAATCGGCAACTCAAAATGCAGTATCGTGGATACTTGGTGGCAGACAGAAACAGGTGGGCA TATCATCAGCCCTTTACCGGGAGCTACGCCTATAAGGGCCAGCTGTGCAACTTTGCCTTTGCCTGGAATCCATGCAGAAG TTTTAAACGAAGACGGCACCAAAACAAAGCCCGGAGAGCAAGGGTTTTTATGCATCACTAAGCCATGGCCTTCTATGGTA AGAAACATTTGGGGCGATGAAAAACGATACATTGATAGCTATTTTTCTCAGATCAAGTTGAATGGGGAATATGTCTACCT CTCTGGAGATGGCGCTATCGTGGATGAAAACGGATACATCACTATTATTGGGCGCACAGATGATATTGTGAATGTGAGTG GGCATAGGATTGGCACGGCTGAAGTGGAGAGCGCTATTTCTAAACATGAAATGGTGGTTGAATGCGCGGTAGTGGGTATC CCTGATACGATTAAAGGAGAGGGCTTGTTTGCGTTTGTGGTGCTGTGTGATGGGGCTAAATGCAATCTTGGCGAGAGTTT AGAATTATTAAAAGAAATGAATCATATCTTATCCGTTGAAATTGGAAAGATCGCTAAATTAGACAATGTCATGTATGTGC CGGGTTTACCTAAAACCAGAAGCGGGAAAATCATGAGAAGGCTTTTAAAATCCATCGCCAAAAAAGAGCCCATCACTCAA GATTTAAGCACGCTAGAAGATGTGAATGTGGTTAAAGAAATAATGAGTATCGTTCAAATGGAAGAGTGA
Upstream 100 bases:
>100_bases CAATCCCCACAGAAAGAGAAAAGTATCCCTCCCTTTAAAAGAGTGTGAGTTTGGATACAATAATAAAAAATGCGCTTAAA ACCATGAAAAAGGAGATGCG
Downstream 100 bases:
>100_bases AATCTCAAAAATGCTTTTTGGCGTTTTTTAGCCAAATAACAAGAGCCAATTTCAATCAAGCGGTAATTTCTCATAAAGTG TAGGAAACGCTACCGCTTCG
Product: acetyl-CoA synthetase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme [H]
Number of amino acids: Translated: 662; Mature: 662
Protein sequence:
>662_residues MQLDDDLEFAKKIFNPNRAFAKQARIKNMCEYKDLVHEANEDYEHFWGELAKQKLTWFKPFDKVLNSDNAPFFKWFENGK INVSYNCIDRHLKDKKNKVAIIFEGEMGDYNVITYRKLHSEVNKTANLLKNEFNVKKGDRVIIYMPMIVESVYMMLACAR IGAIHSIVFAGFSPEALRDRINDAQAKLVITADGTFRKGKPYMLKPALDKALENNACPSVEKALIVIRNAKEIDYVRGRD FVYNEMVNYQSDKCEPEMMDSEDPLFLLYTSGSTGKPKGVQHSNAGYLLWAQMTMEWVFDIRDNDNFWCTADIGWITGHT YVVYGPLACGATTLILEGTMSYPDYGRWWRMIEEYRVDKFYTSPTAIRMLHAKGENEPLKYNLESLKVLGTVGEPINPTA WKWFYEKIGNSKCSIVDTWWQTETGGHIISPLPGATPIRASCATLPLPGIHAEVLNEDGTKTKPGEQGFLCITKPWPSMV RNIWGDEKRYIDSYFSQIKLNGEYVYLSGDGAIVDENGYITIIGRTDDIVNVSGHRIGTAEVESAISKHEMVVECAVVGI PDTIKGEGLFAFVVLCDGAKCNLGESLELLKEMNHILSVEIGKIAKLDNVMYVPGLPKTRSGKIMRRLLKSIAKKEPITQ DLSTLEDVNVVKEIMSIVQMEE
Sequences:
>Translated_662_residues MQLDDDLEFAKKIFNPNRAFAKQARIKNMCEYKDLVHEANEDYEHFWGELAKQKLTWFKPFDKVLNSDNAPFFKWFENGK INVSYNCIDRHLKDKKNKVAIIFEGEMGDYNVITYRKLHSEVNKTANLLKNEFNVKKGDRVIIYMPMIVESVYMMLACAR IGAIHSIVFAGFSPEALRDRINDAQAKLVITADGTFRKGKPYMLKPALDKALENNACPSVEKALIVIRNAKEIDYVRGRD FVYNEMVNYQSDKCEPEMMDSEDPLFLLYTSGSTGKPKGVQHSNAGYLLWAQMTMEWVFDIRDNDNFWCTADIGWITGHT YVVYGPLACGATTLILEGTMSYPDYGRWWRMIEEYRVDKFYTSPTAIRMLHAKGENEPLKYNLESLKVLGTVGEPINPTA WKWFYEKIGNSKCSIVDTWWQTETGGHIISPLPGATPIRASCATLPLPGIHAEVLNEDGTKTKPGEQGFLCITKPWPSMV RNIWGDEKRYIDSYFSQIKLNGEYVYLSGDGAIVDENGYITIIGRTDDIVNVSGHRIGTAEVESAISKHEMVVECAVVGI PDTIKGEGLFAFVVLCDGAKCNLGESLELLKEMNHILSVEIGKIAKLDNVMYVPGLPKTRSGKIMRRLLKSIAKKEPITQ DLSTLEDVNVVKEIMSIVQMEE >Mature_662_residues MQLDDDLEFAKKIFNPNRAFAKQARIKNMCEYKDLVHEANEDYEHFWGELAKQKLTWFKPFDKVLNSDNAPFFKWFENGK INVSYNCIDRHLKDKKNKVAIIFEGEMGDYNVITYRKLHSEVNKTANLLKNEFNVKKGDRVIIYMPMIVESVYMMLACAR IGAIHSIVFAGFSPEALRDRINDAQAKLVITADGTFRKGKPYMLKPALDKALENNACPSVEKALIVIRNAKEIDYVRGRD FVYNEMVNYQSDKCEPEMMDSEDPLFLLYTSGSTGKPKGVQHSNAGYLLWAQMTMEWVFDIRDNDNFWCTADIGWITGHT YVVYGPLACGATTLILEGTMSYPDYGRWWRMIEEYRVDKFYTSPTAIRMLHAKGENEPLKYNLESLKVLGTVGEPINPTA WKWFYEKIGNSKCSIVDTWWQTETGGHIISPLPGATPIRASCATLPLPGIHAEVLNEDGTKTKPGEQGFLCITKPWPSMV RNIWGDEKRYIDSYFSQIKLNGEYVYLSGDGAIVDENGYITIIGRTDDIVNVSGHRIGTAEVESAISKHEMVVECAVVGI PDTIKGEGLFAFVVLCDGAKCNLGESLELLKEMNHILSVEIGKIAKLDNVMYVPGLPKTRSGKIMRRLLKSIAKKEPITQ DLSTLEDVNVVKEIMSIVQMEE
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI253970489, Length=691, Percent_Identity=43.5600578871201, Blast_Score=560, Evalue=1e-159, Organism=Homo sapiens, GI8923896, Length=678, Percent_Identity=44.1002949852507, Blast_Score=559, Evalue=1e-159, Organism=Homo sapiens, GI28416953, Length=635, Percent_Identity=44.8818897637795, Blast_Score=544, Evalue=1e-154, Organism=Homo sapiens, GI13375727, Length=650, Percent_Identity=34.6153846153846, Blast_Score=373, Evalue=1e-103, Organism=Homo sapiens, GI38505220, Length=523, Percent_Identity=27.151051625239, Blast_Score=182, Evalue=1e-45, Organism=Homo sapiens, GI122937307, Length=527, Percent_Identity=27.134724857685, Blast_Score=178, Evalue=2e-44, Organism=Homo sapiens, GI42544132, Length=520, Percent_Identity=27.6923076923077, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI31982927, Length=643, Percent_Identity=25.194401244168, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI58082049, Length=523, Percent_Identity=27.5334608030593, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI115511026, Length=535, Percent_Identity=25.7943925233645, Blast_Score=156, Evalue=6e-38, Organism=Homo sapiens, GI157311624, Length=523, Percent_Identity=26.7686424474187, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI157311622, Length=523, Percent_Identity=26.7686424474187, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI195947378, Length=459, Percent_Identity=23.7472766884532, Blast_Score=111, Evalue=3e-24, Organism=Homo sapiens, GI42544134, Length=313, Percent_Identity=25.8785942492013, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI156151445, Length=547, Percent_Identity=24.6800731261426, Blast_Score=87, Evalue=5e-17, Organism=Homo sapiens, GI187761345, Length=424, Percent_Identity=23.8207547169811, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI187761343, Length=424, Percent_Identity=23.8207547169811, Blast_Score=77, Evalue=4e-14, Organism=Escherichia coli, GI1790505, Length=633, Percent_Identity=46.9194312796209, Blast_Score=599, Evalue=1e-172, Organism=Escherichia coli, GI1786529, Length=641, Percent_Identity=36.6614664586583, Blast_Score=407, Evalue=1e-115, Organism=Escherichia coli, GI1788107, Length=544, Percent_Identity=24.0808823529412, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI221142682, Length=539, Percent_Identity=24.1187384044527, Blast_Score=103, Evalue=5e-23, Organism=Escherichia coli, GI145693145, Length=551, Percent_Identity=23.049001814882, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1786810, Length=532, Percent_Identity=21.4285714285714, Blast_Score=77, Evalue=5e-15, Organism=Caenorhabditis elegans, GI71983001, Length=667, Percent_Identity=43.328335832084, Blast_Score=514, Evalue=1e-146, Organism=Caenorhabditis elegans, GI71982997, Length=676, Percent_Identity=43.1952662721894, Blast_Score=514, Evalue=1e-146, Organism=Caenorhabditis elegans, GI17569507, Length=658, Percent_Identity=23.4042553191489, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17531443, Length=490, Percent_Identity=25.9183673469388, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17557194, Length=562, Percent_Identity=24.7330960854093, Blast_Score=93, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17559526, Length=567, Percent_Identity=23.2804232804233, Blast_Score=92, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17558820, Length=531, Percent_Identity=21.4689265536723, Blast_Score=82, Evalue=9e-16, Organism=Caenorhabditis elegans, GI71985884, Length=414, Percent_Identity=22.2222222222222, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17560140, Length=520, Percent_Identity=21.1538461538462, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17538037, Length=134, Percent_Identity=30.5970149253731, Blast_Score=71, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323182, Length=648, Percent_Identity=44.7530864197531, Blast_Score=545, Evalue=1e-156, Organism=Saccharomyces cerevisiae, GI6319264, Length=664, Percent_Identity=44.7289156626506, Blast_Score=543, Evalue=1e-155, Organism=Saccharomyces cerevisiae, GI6319699, Length=537, Percent_Identity=21.7877094972067, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24667955, Length=669, Percent_Identity=46.6367713004484, Blast_Score=586, Evalue=1e-167, Organism=Drosophila melanogaster, GI62472339, Length=557, Percent_Identity=50.2692998204668, Blast_Score=543, Evalue=1e-154, Organism=Drosophila melanogaster, GI24667959, Length=525, Percent_Identity=49.9047619047619, Blast_Score=511, Evalue=1e-145, Organism=Drosophila melanogaster, GI21355225, Length=643, Percent_Identity=32.1928460342146, Blast_Score=328, Evalue=9e-90, Organism=Drosophila melanogaster, GI18859661, Length=532, Percent_Identity=25.187969924812, Blast_Score=106, Evalue=5e-23, Organism=Drosophila melanogaster, GI24648260, Length=376, Percent_Identity=23.1382978723404, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24656500, Length=373, Percent_Identity=22.7882037533512, Blast_Score=71, Evalue=3e-12, Organism=Drosophila melanogaster, GI21358303, Length=486, Percent_Identity=20.9876543209877, Blast_Score=70, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.1 [H]
Molecular weight: Translated: 75030; Mature: 75030
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLDDDLEFAKKIFNPNRAFAKQARIKNMCEYKDLVHEANEDYEHFWGELAKQKLTWFKP CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCH FDKVLNSDNAPFFKWFENGKINVSYNCIDRHLKDKKNKVAIIFEGEMGDYNVITYRKLHS HHHHHCCCCCCEEEEECCCEEEEEHHHHHHHHHCCCCEEEEEEECCCCCCEEEEHHHHHH EVNKTANLLKNEFNVKKGDRVIIYMPMIVESVYMMLACARIGAIHSIVFAGFSPEALRDR HHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH INDAQAKLVITADGTFRKGKPYMLKPALDKALENNACPSVEKALIVIRNAKEIDYVRGRD CCCCCEEEEEEECCCCCCCCCEEECHHHHHHHCCCCCCCHHEEEEEEECCCCCCCCCCCC FVYNEMVNYQSDKCEPEMMDSEDPLFLLYTSGSTGKPKGVQHSNAGYLLWAQMTMEWVFD HHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEE IRDNDNFWCTADIGWITGHTYVVYGPLACGATTLILEGTMSYPDYGRWWRMIEEYRVDKF EECCCCEEEEEECCEEECCEEEEEECHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHE YTSPTAIRMLHAKGENEPLKYNLESLKVLGTVGEPINPTAWKWFYEKIGNSKCSIVDTWW ECCCHHEEEEECCCCCCCEEECHHHEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECC QTETGGHIISPLPGATPIRASCATLPLPGIHAEVLNEDGTKTKPGEQGFLCITKPWPSMV CCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCHHHH RNIWGDEKRYIDSYFSQIKLNGEYVYLSGDGAIVDENGYITIIGRTDDIVNVSGHRIGTA HHHCCCHHHHHHHHHHHEEECCEEEEEECCCEEEECCCEEEEEECCCCEEECCCCCCCHH EVESAISKHEMVVECAVVGIPDTIKGEGLFAFVVLCDGAKCNLGESLELLKEMNHILSVE HHHHHHHHHHEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHEEE IGKIAKLDNVMYVPGLPKTRSGKIMRRLLKSIAKKEPITQDLSTLEDVNVVKEIMSIVQM HHHHEECCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC EE CC >Mature Secondary Structure MQLDDDLEFAKKIFNPNRAFAKQARIKNMCEYKDLVHEANEDYEHFWGELAKQKLTWFKP CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCH FDKVLNSDNAPFFKWFENGKINVSYNCIDRHLKDKKNKVAIIFEGEMGDYNVITYRKLHS HHHHHCCCCCCEEEEECCCEEEEEHHHHHHHHHCCCCEEEEEEECCCCCCEEEEHHHHHH EVNKTANLLKNEFNVKKGDRVIIYMPMIVESVYMMLACARIGAIHSIVFAGFSPEALRDR HHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH INDAQAKLVITADGTFRKGKPYMLKPALDKALENNACPSVEKALIVIRNAKEIDYVRGRD CCCCCEEEEEEECCCCCCCCCEEECHHHHHHHCCCCCCCHHEEEEEEECCCCCCCCCCCC FVYNEMVNYQSDKCEPEMMDSEDPLFLLYTSGSTGKPKGVQHSNAGYLLWAQMTMEWVFD HHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEE IRDNDNFWCTADIGWITGHTYVVYGPLACGATTLILEGTMSYPDYGRWWRMIEEYRVDKF EECCCCEEEEEECCEEECCEEEEEECHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHE YTSPTAIRMLHAKGENEPLKYNLESLKVLGTVGEPINPTAWKWFYEKIGNSKCSIVDTWW ECCCHHEEEEECCCCCCCEEECHHHEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECC QTETGGHIISPLPGATPIRASCATLPLPGIHAEVLNEDGTKTKPGEQGFLCITKPWPSMV CCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCHHHH RNIWGDEKRYIDSYFSQIKLNGEYVYLSGDGAIVDENGYITIIGRTDDIVNVSGHRIGTA HHHCCCHHHHHHHHHHHEEECCEEEEEECCCEEEECCCEEEEEECCCCEEECCCCCCCHH EVESAISKHEMVVECAVVGIPDTIKGEGLFAFVVLCDGAKCNLGESLELLKEMNHILSVE HHHHHHHHHHEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHEEE IGKIAKLDNVMYVPGLPKTRSGKIMRRLLKSIAKKEPITQDLSTLEDVNVVKEIMSIVQM HHHHEECCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC EE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA