| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108562684
Identifier: 108562684
GI number: 108562684
Start: 263804
End: 264475
Strand: Direct
Name: 108562684
Synonym: HPAG1_0259
Alternate gene names: NA
Gene position: 263804-264475 (Clockwise)
Preceding gene: 108562683
Following gene: 108562685
Centisome position: 16.53
GC content: 39.88
Gene sequence:
>672_bases ATGCGTAAAGTCTTGTTAATGGGCTTGATTTTACAAGCGCTTTTTAGCGAAGAAGCCGCGCAAGAATTGTTGCAATGCTC TGCGATTTTTGAATCTAAAAAAGCCGAATTGAAAGACGATTTGCGCCGATTGAGCGAAAAAGAGCAGTCTTTAAGGATCT TGCAAACCGAAAACGCCCGCCTTTTAGATGAAAAAACCGATCTGTTGAACCAAAAAGAAAAAGAAGTGGAAGAAAAACTG AAAAATTTAGCCGCTAAAGAAGAAGCCTTTAAAACCTTACAAACGGAAGAAAAAAAGCGCCTTAAAAATTTGATAGAAGA AAACGAAGGCATTTTAAGAGAAATCAAGCAGGCTAAAGACAGCAAGATTGGCGAAACTTACTCTAAAATGAAAGATTCTA AATCGGCTCTGATTTTAGAGAATTTACCCACTCAAAACGCCTTAGAAATTTTAATGGCGCTAAAACCCCAAGAATTAGGT AAAATTCTAGCCAAAATGGATCCTAAAAAAGCGGCGGCTTTGACAGAGTTGTGGCAAAAACCCCCAAAAGAAAATAAAGA AAACCAAAAAACCACAGAGCCTACACCAGCGTCCGTGCCCCCCATAGCGCCCACACCACCCAAAGAGCCGATGATAAAAG ATCCTAACACCAAAGAGCCTTTAGGGGTATGA
Upstream 100 bases:
>100_bases GAAAAGGAAAAGCAAAAAGAAAAGGAAATTTTGGAAAAAAAAGAGCAGGCTCTTTTGGACGAAAACGCCATGATTTTACA CTGGCAAAAAGGGGGCTTGC
Downstream 100 bases:
>100_bases TGTTCATTGTAGCGGTTTTGATGCTGGCGTTTTTAATTTTTGTCCATGAATTAGGGCATTTCACGATCGCTAGGATTTGT GGGGTGAAAGTAGAAGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: PDP Protein; MgtE Intracellular N Domain; ATPase AAA Family Protein; MTA/SAH Nucleosidase; Mgte Intracellular Region
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MRKVLLMGLILQALFSEEAAQELLQCSAIFESKKAELKDDLRRLSEKEQSLRILQTENARLLDEKTDLLNQKEKEVEEKL KNLAAKEEAFKTLQTEEKKRLKNLIEENEGILREIKQAKDSKIGETYSKMKDSKSALILENLPTQNALEILMALKPQELG KILAKMDPKKAAALTELWQKPPKENKENQKTTEPTPASVPPIAPTPPKEPMIKDPNTKEPLGV
Sequences:
>Translated_223_residues MRKVLLMGLILQALFSEEAAQELLQCSAIFESKKAELKDDLRRLSEKEQSLRILQTENARLLDEKTDLLNQKEKEVEEKL KNLAAKEEAFKTLQTEEKKRLKNLIEENEGILREIKQAKDSKIGETYSKMKDSKSALILENLPTQNALEILMALKPQELG KILAKMDPKKAAALTELWQKPPKENKENQKTTEPTPASVPPIAPTPPKEPMIKDPNTKEPLGV >Mature_223_residues MRKVLLMGLILQALFSEEAAQELLQCSAIFESKKAELKDDLRRLSEKEQSLRILQTENARLLDEKTDLLNQKEKEVEEKL KNLAAKEEAFKTLQTEEKKRLKNLIEENEGILREIKQAKDSKIGETYSKMKDSKSALILENLPTQNALEILMALKPQELG KILAKMDPKKAAALTELWQKPPKENKENQKTTEPTPASVPPIAPTPPKEPMIKDPNTKEPLGV
Specific function: Unknown
COG id: COG3334
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25290; Mature: 25290
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVLLMGLILQALFSEEAAQELLQCSAIFESKKAELKDDLRRLSEKEQSLRILQTENAR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LLDEKTDLLNQKEKEVEEKLKNLAAKEEAFKTLQTEEKKRLKNLIEENEGILREIKQAKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH SKIGETYSKMKDSKSALILENLPTQNALEILMALKPQELGKILAKMDPKKAAALTELWQK HHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHC PPKENKENQKTTEPTPASVPPIAPTPPKEPMIKDPNTKEPLGV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRKVLLMGLILQALFSEEAAQELLQCSAIFESKKAELKDDLRRLSEKEQSLRILQTENAR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LLDEKTDLLNQKEKEVEEKLKNLAAKEEAFKTLQTEEKKRLKNLIEENEGILREIKQAKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH SKIGETYSKMKDSKSALILENLPTQNALEILMALKPQELGKILAKMDPKKAAALTELWQK HHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHC PPKENKENQKTTEPTPASVPPIAPTPPKEPMIKDPNTKEPLGV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA