Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108562684

Identifier: 108562684

GI number: 108562684

Start: 263804

End: 264475

Strand: Direct

Name: 108562684

Synonym: HPAG1_0259

Alternate gene names: NA

Gene position: 263804-264475 (Clockwise)

Preceding gene: 108562683

Following gene: 108562685

Centisome position: 16.53

GC content: 39.88

Gene sequence:

>672_bases
ATGCGTAAAGTCTTGTTAATGGGCTTGATTTTACAAGCGCTTTTTAGCGAAGAAGCCGCGCAAGAATTGTTGCAATGCTC
TGCGATTTTTGAATCTAAAAAAGCCGAATTGAAAGACGATTTGCGCCGATTGAGCGAAAAAGAGCAGTCTTTAAGGATCT
TGCAAACCGAAAACGCCCGCCTTTTAGATGAAAAAACCGATCTGTTGAACCAAAAAGAAAAAGAAGTGGAAGAAAAACTG
AAAAATTTAGCCGCTAAAGAAGAAGCCTTTAAAACCTTACAAACGGAAGAAAAAAAGCGCCTTAAAAATTTGATAGAAGA
AAACGAAGGCATTTTAAGAGAAATCAAGCAGGCTAAAGACAGCAAGATTGGCGAAACTTACTCTAAAATGAAAGATTCTA
AATCGGCTCTGATTTTAGAGAATTTACCCACTCAAAACGCCTTAGAAATTTTAATGGCGCTAAAACCCCAAGAATTAGGT
AAAATTCTAGCCAAAATGGATCCTAAAAAAGCGGCGGCTTTGACAGAGTTGTGGCAAAAACCCCCAAAAGAAAATAAAGA
AAACCAAAAAACCACAGAGCCTACACCAGCGTCCGTGCCCCCCATAGCGCCCACACCACCCAAAGAGCCGATGATAAAAG
ATCCTAACACCAAAGAGCCTTTAGGGGTATGA

Upstream 100 bases:

>100_bases
GAAAAGGAAAAGCAAAAAGAAAAGGAAATTTTGGAAAAAAAAGAGCAGGCTCTTTTGGACGAAAACGCCATGATTTTACA
CTGGCAAAAAGGGGGCTTGC

Downstream 100 bases:

>100_bases
TGTTCATTGTAGCGGTTTTGATGCTGGCGTTTTTAATTTTTGTCCATGAATTAGGGCATTTCACGATCGCTAGGATTTGT
GGGGTGAAAGTAGAAGTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: PDP Protein; MgtE Intracellular N Domain; ATPase AAA Family Protein; MTA/SAH Nucleosidase; Mgte Intracellular Region

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MRKVLLMGLILQALFSEEAAQELLQCSAIFESKKAELKDDLRRLSEKEQSLRILQTENARLLDEKTDLLNQKEKEVEEKL
KNLAAKEEAFKTLQTEEKKRLKNLIEENEGILREIKQAKDSKIGETYSKMKDSKSALILENLPTQNALEILMALKPQELG
KILAKMDPKKAAALTELWQKPPKENKENQKTTEPTPASVPPIAPTPPKEPMIKDPNTKEPLGV

Sequences:

>Translated_223_residues
MRKVLLMGLILQALFSEEAAQELLQCSAIFESKKAELKDDLRRLSEKEQSLRILQTENARLLDEKTDLLNQKEKEVEEKL
KNLAAKEEAFKTLQTEEKKRLKNLIEENEGILREIKQAKDSKIGETYSKMKDSKSALILENLPTQNALEILMALKPQELG
KILAKMDPKKAAALTELWQKPPKENKENQKTTEPTPASVPPIAPTPPKEPMIKDPNTKEPLGV
>Mature_223_residues
MRKVLLMGLILQALFSEEAAQELLQCSAIFESKKAELKDDLRRLSEKEQSLRILQTENARLLDEKTDLLNQKEKEVEEKL
KNLAAKEEAFKTLQTEEKKRLKNLIEENEGILREIKQAKDSKIGETYSKMKDSKSALILENLPTQNALEILMALKPQELG
KILAKMDPKKAAALTELWQKPPKENKENQKTTEPTPASVPPIAPTPPKEPMIKDPNTKEPLGV

Specific function: Unknown

COG id: COG3334

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25290; Mature: 25290

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVLLMGLILQALFSEEAAQELLQCSAIFESKKAELKDDLRRLSEKEQSLRILQTENAR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LLDEKTDLLNQKEKEVEEKLKNLAAKEEAFKTLQTEEKKRLKNLIEENEGILREIKQAKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
SKIGETYSKMKDSKSALILENLPTQNALEILMALKPQELGKILAKMDPKKAAALTELWQK
HHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHC
PPKENKENQKTTEPTPASVPPIAPTPPKEPMIKDPNTKEPLGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKVLLMGLILQALFSEEAAQELLQCSAIFESKKAELKDDLRRLSEKEQSLRILQTENAR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LLDEKTDLLNQKEKEVEEKLKNLAAKEEAFKTLQTEEKKRLKNLIEENEGILREIKQAKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
SKIGETYSKMKDSKSALILENLPTQNALEILMALKPQELGKILAKMDPKKAAALTELWQK
HHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHC
PPKENKENQKTTEPTPASVPPIAPTPPKEPMIKDPNTKEPLGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA