Click here to switch to the map view.

The map label for this gene is yejE [H]

Identifier: 108562679

GI number: 108562679

Start: 257812

End: 258834

Strand: Reverse

Name: yejE [H]

Synonym: HPAG1_0254

Alternate gene names: 108562679

Gene position: 258834-257812 (Counterclockwise)

Preceding gene: 108562687

Following gene: 108562678

Centisome position: 16.21

GC content: 42.72

Gene sequence:

>1023_bases
TTGAGCGTGAGCAGTTTGTTTAAAATGCGTATTCTTAGCTTTAAAAAGAATAAGCGGGCGGTGTTTTCACTCTATCTTTT
TATCGCTTTATTAGCGCTTTCTCTTTTAGCCCCCTTATGGGTGAATGATCGCCCTTTATTCATCTATAAAGACAATAAAG
CGTATTTCCCTATGTTTAAAAACTATGCGGAAGTGGAGTTTGGAGGCGATTTTTTCACCCCTACGGACTATAACGATCCT
TATGTGCAAAACACGCTTTTAAAAGACGCTTTCATCATCCATGCGCTCATTCCTTATAGCTATGATACGATCATTATGGA
TTTAGACTCGCCTGCCCCCACCCCCCCAAGCTTCAAACACCTTTTAGGCACAGACGATCAAGCCAGAGATGTGTTAGCCA
GGCTGGTTTATGGCTATCGTGTTTCGTTAGTGTTTGGGATTTTACTCACCCTTTTTAGCGTTCTTATTGGCGTGAGTTTG
GGAGCGTTTCAGGGGTATTATGGAGGGTTAGTGGATTTATTGGGGCAAAGGTTGAGCGAAATTTGGAGCGCGATCCCCAT
GCTTTTTTTACTCATTGTGATTTCTAGCGCGTTCAATTCTAATTTTTGGATCATCTTGTTTTTAGTCTTGCTCTTTAGTT
GGATGGGGCTTTCTCAAGTCGTGCGCACGGAGTTTTTAAAAGCAAGGAATATGGACTACACCAAAGCCGCTAGAGCGCTT
GGGGTGAATGATTTAAAAATCATTTTCTACCATGTTTTACCCAATGCTTTAGTAGCGACGATCACTTATGTGCCGTTTTT
AATGGCGGCCAGTATTTCTACTTTAGTGTCTTTGGATTTTTTGGGTTTTGGCATGCCTATAGGGAGCGCGAGTTTGGGCG
AATTAGTCAATCAAGGCAAGGATAACCTCACCACGCCCCATTTAGCCATCGTTGCGTTTGTAGCCATTAGCTTGTTGCTT
TCTGTTTTGGTGTTCATTGGCGAAGGGGTGCGCGATGCTTTCAACGCTAACATGCTCAAATAA

Upstream 100 bases:

>100_bases
CACCATTATTATCCTCTTTCTTTATGGATCAAACCCATTTTCTTGCTAGTATTACCCATAATTAATTATAATCTTAGGAA
TCGTTTTTCATCAAGGGAGT

Downstream 100 bases:

>100_bases
GGGGGTTACATGCTAGAAATCAAAAACTTGAACTGCGTTTTAAACGCACATTTTTCGCTCCAAAACATCAATATTTCGTT
AAATCCTAGCGAAAGGGTGG

Product: oligopeptide permease integral membrane protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MSVSSLFKMRILSFKKNKRAVFSLYLFIALLALSLLAPLWVNDRPLFIYKDNKAYFPMFKNYAEVEFGGDFFTPTDYNDP
YVQNTLLKDAFIIHALIPYSYDTIIMDLDSPAPTPPSFKHLLGTDDQARDVLARLVYGYRVSLVFGILLTLFSVLIGVSL
GAFQGYYGGLVDLLGQRLSEIWSAIPMLFLLIVISSAFNSNFWIILFLVLLFSWMGLSQVVRTEFLKARNMDYTKAARAL
GVNDLKIIFYHVLPNALVATITYVPFLMAASISTLVSLDFLGFGMPIGSASLGELVNQGKDNLTTPHLAIVAFVAISLLL
SVLVFIGEGVRDAFNANMLK

Sequences:

>Translated_340_residues
MSVSSLFKMRILSFKKNKRAVFSLYLFIALLALSLLAPLWVNDRPLFIYKDNKAYFPMFKNYAEVEFGGDFFTPTDYNDP
YVQNTLLKDAFIIHALIPYSYDTIIMDLDSPAPTPPSFKHLLGTDDQARDVLARLVYGYRVSLVFGILLTLFSVLIGVSL
GAFQGYYGGLVDLLGQRLSEIWSAIPMLFLLIVISSAFNSNFWIILFLVLLFSWMGLSQVVRTEFLKARNMDYTKAARAL
GVNDLKIIFYHVLPNALVATITYVPFLMAASISTLVSLDFLGFGMPIGSASLGELVNQGKDNLTTPHLAIVAFVAISLLL
SVLVFIGEGVRDAFNANMLK
>Mature_339_residues
SVSSLFKMRILSFKKNKRAVFSLYLFIALLALSLLAPLWVNDRPLFIYKDNKAYFPMFKNYAEVEFGGDFFTPTDYNDPY
VQNTLLKDAFIIHALIPYSYDTIIMDLDSPAPTPPSFKHLLGTDDQARDVLARLVYGYRVSLVFGILLTLFSVLIGVSLG
AFQGYYGGLVDLLGQRLSEIWSAIPMLFLLIVISSAFNSNFWIILFLVLLFSWMGLSQVVRTEFLKARNMDYTKAARALG
VNDLKIIFYHVLPNALVATITYVPFLMAASISTLVSLDFLGFGMPIGSASLGELVNQGKDNLTTPHLAIVAFVAISLLLS
VLVFIGEGVRDAFNANMLK

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4239

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788505, Length=335, Percent_Identity=50.4477611940299, Blast_Score=358, Evalue=1e-100,
Organism=Escherichia coli, GI1787054, Length=226, Percent_Identity=29.2035398230088, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1787498, Length=304, Percent_Identity=28.9473684210526, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1787760, Length=220, Percent_Identity=27.7272727272727, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1789964, Length=231, Percent_Identity=35.0649350649351, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1789889, Length=246, Percent_Identity=24.390243902439, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787549, Length=235, Percent_Identity=26.8085106382979, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37915; Mature: 37784

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSSLFKMRILSFKKNKRAVFSLYLFIALLALSLLAPLWVNDRPLFIYKDNKAYFPMFK
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEECHHHC
NYAEVEFGGDFFTPTDYNDPYVQNTLLKDAFIIHALIPYSYDTIIMDLDSPAPTPPSFKH
CCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHH
LLGTDDQARDVLARLVYGYRVSLVFGILLTLFSVLIGVSLGAFQGYYGGLVDLLGQRLSE
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWSAIPMLFLLIVISSAFNSNFWIILFLVLLFSWMGLSQVVRTEFLKARNMDYTKAARAL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
GVNDLKIIFYHVLPNALVATITYVPFLMAASISTLVSLDFLGFGMPIGSASLGELVNQGK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
DNLTTPHLAIVAFVAISLLLSVLVFIGEGVRDAFNANMLK
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC
>Mature Secondary Structure 
SVSSLFKMRILSFKKNKRAVFSLYLFIALLALSLLAPLWVNDRPLFIYKDNKAYFPMFK
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEECHHHC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CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]