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The map label for this gene is 108562551

Identifier: 108562551

GI number: 108562551

Start: 134174

End: 135034

Strand: Direct

Name: 108562551

Synonym: HPAG1_0126

Alternate gene names: NA

Gene position: 134174-135034 (Clockwise)

Preceding gene: 108562550

Following gene: 108562552

Centisome position: 8.4

GC content: 42.16

Gene sequence:

>861_bases
ATGAAGAAATCTGTTATAGTAGGTGCTATCTCTCTAGCAATGACAAGCTTGTTGTCAGCAGAGACCCCTAAGCAAGAAAA
AGCTATTAAGACTAGCCCTACCAAAAAAGGTGAAAGAAATGCTGCTTTTATAGGGATTGATTACCAGTTGGGTATGCTCA
GCACTACCGCTCAAAATTGTTCCCATGGGAATTGTAATGGTAATCAAAGTGGGGCTTACGGCTCTAACACGCCTAACATG
CCTACAGCGTCAAACCCAACAGGAGGGCTTACTCATGGCGCTCTAGGGACTCGTGGGTATAAAGGCTTAAGCAACCAACA
ATACGCTATCAATGGTTTTGGGTTTGTTGTAGGGTATAAGCATTTTTTTAAGAAATCCCCGCAATTTGGAATGCGTTATT
ACGGATTCTTTGATTTTGCAAGCTCTTATTATAAGTATTACACTTATGATGATTATGGCATGAGAGACGCTCGCAAGGGT
TCTCAAAGTTTCATGTTTGGCTATGGGGCTGGCACAGATGTGTTGTTTAACCCGGCTATTTTCAATCGTGAGAACTTGCA
TTTTGGGTTTTTCTTGGGCGTTGCGATCGGTGGCACCTCTTGGGGTCCAACAAACTATTATTTTAAGGACTTAGCTGATG
AGTATAGAGGGAGTTTCCACCCATCAAATTTCCAGGTCTTAGTTAATGGTGGGATCCGCTTAGGCACTAAACACCAAGGT
TTTGAAATTGGCTTGAAAATCCAAACCATTCGCAACAATTACTACACCGCTAGTGCGGATAATGTTCCTGAAGGGACTAC
TTATAGATTCACTTTCCACCGCCCCTATGCCTTTTATTGGCGTTACATTGTAAGCTTTTAA

Upstream 100 bases:

>100_bases
ATTCTCATTCAATCGCTATATTTAATCAAAAAGAAAGCAATTTTATAGTAGAATGTAGCATTTAGAACTCAAGTAGAGAA
AATGTAGAAGGAAGGAATAC

Downstream 100 bases:

>100_bases
GGTGTTTTAGGGCTAATCTTATGGGGGCATAGAAAAGGGCTTTTGCTCTTTATGGCCTTTTATGATTTTCTTGTATCAAA
GGCTTTAAAAAATCAATACG

Product: outer membrane protein HorB

Products: NA

Alternate protein names: Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein/Porin; Outer Membrane Protein HorC; Outer Membrane Protein HopW Protein (; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HorJ; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Function; Outer Membrane Protein HorK; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HorF; Outer Membrane Protein HopE; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein HorI; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopG

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKKSVIVGAISLAMTSLLSAETPKQEKAIKTSPTKKGERNAAFIGIDYQLGMLSTTAQNCSHGNCNGNQSGAYGSNTPNM
PTASNPTGGLTHGALGTRGYKGLSNQQYAINGFGFVVGYKHFFKKSPQFGMRYYGFFDFASSYYKYYTYDDYGMRDARKG
SQSFMFGYGAGTDVLFNPAIFNRENLHFGFFLGVAIGGTSWGPTNYYFKDLADEYRGSFHPSNFQVLVNGGIRLGTKHQG
FEIGLKIQTIRNNYYTASADNVPEGTTYRFTFHRPYAFYWRYIVSF

Sequences:

>Translated_286_residues
MKKSVIVGAISLAMTSLLSAETPKQEKAIKTSPTKKGERNAAFIGIDYQLGMLSTTAQNCSHGNCNGNQSGAYGSNTPNM
PTASNPTGGLTHGALGTRGYKGLSNQQYAINGFGFVVGYKHFFKKSPQFGMRYYGFFDFASSYYKYYTYDDYGMRDARKG
SQSFMFGYGAGTDVLFNPAIFNRENLHFGFFLGVAIGGTSWGPTNYYFKDLADEYRGSFHPSNFQVLVNGGIRLGTKHQG
FEIGLKIQTIRNNYYTASADNVPEGTTYRFTFHRPYAFYWRYIVSF
>Mature_286_residues
MKKSVIVGAISLAMTSLLSAETPKQEKAIKTSPTKKGERNAAFIGIDYQLGMLSTTAQNCSHGNCNGNQSGAYGSNTPNM
PTASNPTGGLTHGALGTRGYKGLSNQQYAINGFGFVVGYKHFFKKSPQFGMRYYGFFDFASSYYKYYTYDDYGMRDARKG
SQSFMFGYGAGTDVLFNPAIFNRENLHFGFFLGVAIGGTSWGPTNYYFKDLADEYRGSFHPSNFQVLVNGGIRLGTKHQG
FEIGLKIQTIRNNYYTASADNVPEGTTYRFTFHRPYAFYWRYIVSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31858; Mature: 31858

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSVIVGAISLAMTSLLSAETPKQEKAIKTSPTKKGERNAAFIGIDYQLGMLSTTAQNC
CCCCEEEHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHCCC
SHGNCNGNQSGAYGSNTPNMPTASNPTGGLTHGALGTRGYKGLSNQQYAINGFGFVVGYK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECEEEEEEHH
HFFKKSPQFGMRYYGFFDFASSYYKYYTYDDYGMRDARKGSQSFMFGYGAGTDVLFNPAI
HHHCCCCCCCCEEEEHHHHHHCCEEEEEECCCCCCHHCCCCCEEEEEECCCCCEEECCEE
FNRENLHFGFFLGVAIGGTSWGPTNYYFKDLADEYRGSFHPSNFQVLVNGGIRLGTKHQG
ECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCEEECCCCCC
FEIGLKIQTIRNNYYTASADNVPEGTTYRFTFHRPYAFYWRYIVSF
EEEEEEEEEEECCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHCC
>Mature Secondary Structure
MKKSVIVGAISLAMTSLLSAETPKQEKAIKTSPTKKGERNAAFIGIDYQLGMLSTTAQNC
CCCCEEEHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHCCC
SHGNCNGNQSGAYGSNTPNMPTASNPTGGLTHGALGTRGYKGLSNQQYAINGFGFVVGYK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECEEEEEEHH
HFFKKSPQFGMRYYGFFDFASSYYKYYTYDDYGMRDARKGSQSFMFGYGAGTDVLFNPAI
HHHCCCCCCCCEEEEHHHHHHCCEEEEEECCCCCCHHCCCCCEEEEEECCCCCEEECCEE
FNRENLHFGFFLGVAIGGTSWGPTNYYFKDLADEYRGSFHPSNFQVLVNGGIRLGTKHQG
ECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCEEECCCCCC
FEIGLKIQTIRNNYYTASADNVPEGTTYRFTFHRPYAFYWRYIVSF
EEEEEEEEEEECCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA