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The map label for this gene is 108562542

Identifier: 108562542

GI number: 108562542

Start: 124209

End: 125135

Strand: Direct

Name: 108562542

Synonym: HPAG1_0117

Alternate gene names: NA

Gene position: 124209-125135 (Clockwise)

Preceding gene: 108562541

Following gene: 108562546

Centisome position: 7.78

GC content: 39.81

Gene sequence:

>927_bases
ATGGCTAAAGAAAATCTGCCTGTCGTTTTTGGGCCTGTTTTATCCAGGCGTTTTGGGAGGTCTTTGGGCGTGGATCTATC
GCCCTCTAAAAAACAATGCAATTACAATTGCATTTATTGCGAGTTGGGTAAAGCCAAGCCCATTGAGTGCATGGAAGAAG
TGATCAAAGTAGAAACCTTGATTAGCGCCATTCAAAACGCCCTAAACAACCTCACCACCCCCATTGATGTTTTAACCATT
ACCGCTAATGGCGAACCCACGCTATACCCTCATTTATTAGGGCTTATCCAAAGCGTCAAGCCTTTTTTAAAGGGCGTTAA
AACTTTGATTTTAAGCAACGGCTCGCTATTTTATGAGCCAAAAGTCCAGCAAGCCTTAAAGGAATTTGACATCGTTAAAT
TTTCTTTAGACGCTATTGATTTGAAAGCCTTTGAAAGAGTGGATAAGCCCTATTCTAAAGACATTAACAAGATTTTAGAG
GGGATTTTGCGCTTTTCTCAAATCTATCAAGGGCAATTGGTGGCTGAAGTGCTGTTGATTAAGGGCGTGAATGATAACGC
GAACAACTTAAAGCTCATCGCTGCATTTTTAAAACAAATCAATATAGCCAGAGTGGATTTAAGCACCATAGACAGACCCT
CAAGCTTTAAAGCCCCTAAATTGAGCGAAGATGAATTATTAAAATGCTCTTTATTTTTTGAAGGGCTTTGCGTGAGTTTG
CCTAAACGATCCATTACTCAAGCCAAAAAATTGGTTTCTTGCGGTATAGACGAATTGCTCGCTTTAATTTCCAGGCGCCC
TTTAAGCGCAGAAGAAGCCCCTCTAATACTGGATCCTAACGCTTTTAGGCATTTAGAAACTTTATTAAACCATAAGCAAA
TTACGATTAAAAAAGTCGGCTCTTTGGAGTTTTATTGCGCGTTTTAA

Upstream 100 bases:

>100_bases
TGCGAAAAATGCCATTATTTGATGAGTGAAAGAATCTATCGTAAAAAAAAGGTGCATGAATGCATCCAATGCAAAGAGCG
CGTGTTTTTAGAGGAAGAGA

Downstream 100 bases:

>100_bases
TCCTCCATTTGTTAGTTTTACCTTATTTTAGGGATAGTTTAAGCTTTTAAATAAGGATCTCTTTTATTACCAAATAACGC
TACCATAAAAAATGTTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MAKENLPVVFGPVLSRRFGRSLGVDLSPSKKQCNYNCIYCELGKAKPIECMEEVIKVETLISAIQNALNNLTTPIDVLTI
TANGEPTLYPHLLGLIQSVKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKFSLDAIDLKAFERVDKPYSKDINKILE
GILRFSQIYQGQLVAEVLLIKGVNDNANNLKLIAAFLKQINIARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSL
PKRSITQAKKLVSCGIDELLALISRRPLSAEEAPLILDPNAFRHLETLLNHKQITIKKVGSLEFYCAF

Sequences:

>Translated_308_residues
MAKENLPVVFGPVLSRRFGRSLGVDLSPSKKQCNYNCIYCELGKAKPIECMEEVIKVETLISAIQNALNNLTTPIDVLTI
TANGEPTLYPHLLGLIQSVKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKFSLDAIDLKAFERVDKPYSKDINKILE
GILRFSQIYQGQLVAEVLLIKGVNDNANNLKLIAAFLKQINIARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSL
PKRSITQAKKLVSCGIDELLALISRRPLSAEEAPLILDPNAFRHLETLLNHKQITIKKVGSLEFYCAF
>Mature_307_residues
AKENLPVVFGPVLSRRFGRSLGVDLSPSKKQCNYNCIYCELGKAKPIECMEEVIKVETLISAIQNALNNLTTPIDVLTIT
ANGEPTLYPHLLGLIQSVKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKFSLDAIDLKAFERVDKPYSKDINKILEG
ILRFSQIYQGQLVAEVLLIKGVNDNANNLKLIAAFLKQINIARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSLP
KRSITQAKKLVSCGIDELLALISRRPLSAEEAPLILDPNAFRHLETLLNHKQITIKKVGSLEFYCAF

Specific function: Unknown

COG id: COG0731

COG function: function code C; Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0026 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 34321; Mature: 34190

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKENLPVVFGPVLSRRFGRSLGVDLSPSKKQCNYNCIYCELGKAKPIECMEEVIKVETL
CCCCCCCEEEHHHHHHHHCHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
ISAIQNALNNLTTPIDVLTITANGEPTLYPHLLGLIQSVKPFLKGVKTLILSNGSLFYEP
HHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
KVQQALKEFDIVKFSLDAIDLKAFERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLI
HHHHHHHHHHHHEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGVNDNANNLKLIAAFLKQINIARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSL
CCCCCCCCHHHHHHHHHHHCCHHEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
PKRSITQAKKLVSCGIDELLALISRRPLSAEEAPLILDPNAFRHLETLLNHKQITIKKVG
CHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHCCCEEEEEEEC
SLEFYCAF
CEEEEEEC
>Mature Secondary Structure 
AKENLPVVFGPVLSRRFGRSLGVDLSPSKKQCNYNCIYCELGKAKPIECMEEVIKVETL
CCCCCCEEEHHHHHHHHCHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
ISAIQNALNNLTTPIDVLTITANGEPTLYPHLLGLIQSVKPFLKGVKTLILSNGSLFYEP
HHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
KVQQALKEFDIVKFSLDAIDLKAFERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLI
HHHHHHHHHHHHEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGVNDNANNLKLIAAFLKQINIARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSL
CCCCCCCCHHHHHHHHHHHCCHHEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
PKRSITQAKKLVSCGIDELLALISRRPLSAEEAPLILDPNAFRHLETLLNHKQITIKKVG
CHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHCCCEEEEEEEC
SLEFYCAF
CEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]