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The map label for this gene is 108562505

Identifier: 108562505

GI number: 108562505

Start: 80008

End: 81711

Strand: Direct

Name: 108562505

Synonym: HPAG1_0080

Alternate gene names: NA

Gene position: 80008-81711 (Clockwise)

Preceding gene: 108562504

Following gene: 108562506

Centisome position: 5.01

GC content: 43.02

Gene sequence:

>1704_bases
ATGAAAAAGTCATTCAAAAAATTAGGCTTTTTCTCTTTAGCGACTAGTAGCGTGCTTTTAGGGAGCATGAACGCTACCGA
TTTACAAACCTACGCAGCATTGCAAAAACCATCGCATGTTTTTGGTAATTATGCTGAAAAGGATAAGGATAGTAAATTAA
CAAGCGATTCACTAACGCAACAACAAGCCCAAACTCAAGCCCAAAACACCGCTTCAAGCGACAGCAAAGAAGCGACAACG
CTTGAGAACACCGCTGCTACTGACAGCCAAACCGCCACAACTGATGAAACTTATACAAAAAGCACTGACGCTACCGTAGC
TGATGCGGCTAAACAAGTAGAAACCGATAACACAGCCGTTCAAAACGATGAAAAAACTTTAAAAACAGATGTAGCTAAAG
TTCAAGCTGATGCTAGCACTAAAGATTTTGATGAAACTACTTTTACAAAAGATCAAGCAGCAGAGCAAACCGCTGAAACA
AATTTACAAAATGCTGAAGAACAGCTCACTAACGATCAAAACGCTTTAAACACAGCACTAAAAGATCAGACACCATCAAC
CCCATCAACCCCACCAGCAACAAGTGGTGGTGCTAGCGGGAGCACCGTGGCAAGCCAGCTAACCAAAGACACCACTATGG
TTAATAATCTTAAGAGCGTGAGCGTGAGCGCGATGAACACCACTTTAAGTGGGGTAACGCAACTCTCTCAACAAACCGCA
ACGATTGGCAACCTTTTGAATAGTAGCACCGATTTAAGCAGTGTGATTCCCAACGCTCAAGGGCTAAGTAGTGCGTTTAG
CGCATTAGAAAGCGCTCAAAACACTTTAAAAGGCTATTTAAATTCTTCTAGTGCGACGATTGGGCAATTGACAAACGGCT
CTAATGCGGTTGTGGGCGCGTTAGATAAAGCTATCAATCAAGTGGATATGGCTCTAGCCGATCTTAGTGCAACTGATACG
CAAAAAACGCAAGCCGTTGCGCTTGCAGCTGCTAGTGATAGCGCAACGACAACGACAGATGCCATCAATTTCTTAAACGC
GCTAAAAAACAATCTAATGGCTCAAAAAGATGCCTTTATGAGCGTGCATAAAAACATTCAAACCGCTGTCGCTCAAGCCC
AAGCAACCTACACGCCAAGCGTGATCAACACCAATAATTACGGGCAAATGTATGGGGTAGATGCGATGGCAGGGTATAAG
TGGTTCTTTGGCAAAACCAAACGCTTTGGCTTTAGATCTTATGGATACTACAGCTATAACCATGCGAATTTAAGCTTTGT
AGGGAGCCAGCTTGGAATCATGGAGGGCGCGTCTCAAGTGAATAACTTCACTTATGGCGTGGGCTTTGATGCACTCTATA
ACTTCTATGAAAGTAAAGAGGGCTACAACACAGCAGGGTTGTTCGTGGGCTTTGGGTTAGGAGGGGATTCGTTTATCGTT
CAAGGAGAGAGCTACTTAAAATCTCAAATGCAAATCTGCAACAACACCGCAGGCTGTTCAGCGAGCATGAACACGAGCTA
TTTCCAAATGCCTGTGGAATTTGGTTTTAGGAGCAATTTTTCTAAACACAGCGGGATTGAAGTGGGCCTTAAATTGCCTT
TATTCACCAACCAATTCTATAAAGAAAGGGGCGTAGATGGATCAGTAGATGTGTTCTATAAAAGGAACTTCTCTATCTAT
TTTAACTACATGATCAACTTCTAA

Upstream 100 bases:

>100_bases
GCAACAAAATAGCTCCAGCCCAAGAAACGCAAAGCGCTTCCAAACCGGACACTAAAATCAATCCAAGTGCAAGTTGGATG
AAAAAATAAGGGAGAAAGTC

Downstream 100 bases:

>100_bases
GCCTTTTTCTTCTTTATCAATAGAGGGTTTTCTCTCTGTTGGTTTCTTTTTTCTTTTTTTGCGATATTTGTTTTGTTGGG
GGTTAGGTTTTTGTTTAAGA

Product: outer membrane protein HorA

Products: NA

Alternate protein names: Outer Membrane Protein HorA; Outer Membrane Protein HopQ; Outer Membrane Protein HopE; Outer Membrane Protein HopZ; Outer Membrane Protein(Omp4) HopW Protein SabB; Outer Membrane Protein/Porin; Outer Membrane Protein HorJ; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Protein Adhesin; Outer Membrane Protein Omp; Outer Membrane Function; Outer Membrane Protein HorK; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HopF; Outer Membrane Protein HopG

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MKKSFKKLGFFSLATSSVLLGSMNATDLQTYAALQKPSHVFGNYAEKDKDSKLTSDSLTQQQAQTQAQNTASSDSKEATT
LENTAATDSQTATTDETYTKSTDATVADAAKQVETDNTAVQNDEKTLKTDVAKVQADASTKDFDETTFTKDQAAEQTAET
NLQNAEEQLTNDQNALNTALKDQTPSTPSTPPATSGGASGSTVASQLTKDTTMVNNLKSVSVSAMNTTLSGVTQLSQQTA
TIGNLLNSSTDLSSVIPNAQGLSSAFSALESAQNTLKGYLNSSSATIGQLTNGSNAVVGALDKAINQVDMALADLSATDT
QKTQAVALAAASDSATTTTDAINFLNALKNNLMAQKDAFMSVHKNIQTAVAQAQATYTPSVINTNNYGQMYGVDAMAGYK
WFFGKTKRFGFRSYGYYSYNHANLSFVGSQLGIMEGASQVNNFTYGVGFDALYNFYESKEGYNTAGLFVGFGLGGDSFIV
QGESYLKSQMQICNNTAGCSASMNTSYFQMPVEFGFRSNFSKHSGIEVGLKLPLFTNQFYKERGVDGSVDVFYKRNFSIY
FNYMINF

Sequences:

>Translated_567_residues
MKKSFKKLGFFSLATSSVLLGSMNATDLQTYAALQKPSHVFGNYAEKDKDSKLTSDSLTQQQAQTQAQNTASSDSKEATT
LENTAATDSQTATTDETYTKSTDATVADAAKQVETDNTAVQNDEKTLKTDVAKVQADASTKDFDETTFTKDQAAEQTAET
NLQNAEEQLTNDQNALNTALKDQTPSTPSTPPATSGGASGSTVASQLTKDTTMVNNLKSVSVSAMNTTLSGVTQLSQQTA
TIGNLLNSSTDLSSVIPNAQGLSSAFSALESAQNTLKGYLNSSSATIGQLTNGSNAVVGALDKAINQVDMALADLSATDT
QKTQAVALAAASDSATTTTDAINFLNALKNNLMAQKDAFMSVHKNIQTAVAQAQATYTPSVINTNNYGQMYGVDAMAGYK
WFFGKTKRFGFRSYGYYSYNHANLSFVGSQLGIMEGASQVNNFTYGVGFDALYNFYESKEGYNTAGLFVGFGLGGDSFIV
QGESYLKSQMQICNNTAGCSASMNTSYFQMPVEFGFRSNFSKHSGIEVGLKLPLFTNQFYKERGVDGSVDVFYKRNFSIY
FNYMINF
>Mature_567_residues
MKKSFKKLGFFSLATSSVLLGSMNATDLQTYAALQKPSHVFGNYAEKDKDSKLTSDSLTQQQAQTQAQNTASSDSKEATT
LENTAATDSQTATTDETYTKSTDATVADAAKQVETDNTAVQNDEKTLKTDVAKVQADASTKDFDETTFTKDQAAEQTAET
NLQNAEEQLTNDQNALNTALKDQTPSTPSTPPATSGGASGSTVASQLTKDTTMVNNLKSVSVSAMNTTLSGVTQLSQQTA
TIGNLLNSSTDLSSVIPNAQGLSSAFSALESAQNTLKGYLNSSSATIGQLTNGSNAVVGALDKAINQVDMALADLSATDT
QKTQAVALAAASDSATTTTDAINFLNALKNNLMAQKDAFMSVHKNIQTAVAQAQATYTPSVINTNNYGQMYGVDAMAGYK
WFFGKTKRFGFRSYGYYSYNHANLSFVGSQLGIMEGASQVNNFTYGVGFDALYNFYESKEGYNTAGLFVGFGLGGDSFIV
QGESYLKSQMQICNNTAGCSASMNTSYFQMPVEFGFRSNFSKHSGIEVGLKLPLFTNQFYKERGVDGSVDVFYKRNFSIY
FNYMINF

Specific function: Unknown

COG id: COG5651

COG function: function code N; PPE-repeat proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60748; Mature: 60748

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSFKKLGFFSLATSSVLLGSMNATDLQTYAALQKPSHVFGNYAEKDKDSKLTSDSLTQ
CCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCHHHHCCHHHCCCCCCCCHHHHHH
QQAQTQAQNTASSDSKEATTLENTAATDSQTATTDETYTKSTDATVADAAKQVETDNTAV
HHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
QNDEKTLKTDVAKVQADASTKDFDETTFTKDQAAEQTAETNLQNAEEQLTNDQNALNTAL
CCCHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KDQTPSTPSTPPATSGGASGSTVASQLTKDTTMVNNLKSVSVSAMNTTLSGVTQLSQQTA
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIGNLLNSSTDLSSVIPNAQGLSSAFSALESAQNTLKGYLNSSSATIGQLTNGSNAVVGA
HHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH
LDKAINQVDMALADLSATDTQKTQAVALAAASDSATTTTDAINFLNALKNNLMAQKDAFM
HHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SVHKNIQTAVAQAQATYTPSVINTNNYGQMYGVDAMAGYKWFFGKTKRFGFRSYGYYSYN
HHHHHHHHHHHHHHHCCCCCEECCCCCCCEECCHHHHCCHHHCCCCCCCCCEECCEEEEC
HANLSFVGSQLGIMEGASQVNNFTYGVGFDALYNFYESKEGYNTAGLFVGFGLGGDSFIV
CCCCEEHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEE
QGESYLKSQMQICNNTAGCSASMNTSYFQMPVEFGFRSNFSKHSGIEVGLKLPLFTNQFY
ECHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCCCEEEEECCHHHHHHH
KERGVDGSVDVFYKRNFSIYFNYMINF
HHHCCCCCEEEEEECCEEEEEEEEEEC
>Mature Secondary Structure
MKKSFKKLGFFSLATSSVLLGSMNATDLQTYAALQKPSHVFGNYAEKDKDSKLTSDSLTQ
CCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCHHHHCCHHHCCCCCCCCHHHHHH
QQAQTQAQNTASSDSKEATTLENTAATDSQTATTDETYTKSTDATVADAAKQVETDNTAV
HHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
QNDEKTLKTDVAKVQADASTKDFDETTFTKDQAAEQTAETNLQNAEEQLTNDQNALNTAL
CCCHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KDQTPSTPSTPPATSGGASGSTVASQLTKDTTMVNNLKSVSVSAMNTTLSGVTQLSQQTA
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIGNLLNSSTDLSSVIPNAQGLSSAFSALESAQNTLKGYLNSSSATIGQLTNGSNAVVGA
HHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH
LDKAINQVDMALADLSATDTQKTQAVALAAASDSATTTTDAINFLNALKNNLMAQKDAFM
HHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SVHKNIQTAVAQAQATYTPSVINTNNYGQMYGVDAMAGYKWFFGKTKRFGFRSYGYYSYN
HHHHHHHHHHHHHHHCCCCCEECCCCCCCEECCHHHHCCHHHCCCCCCCCCEECCEEEEC
HANLSFVGSQLGIMEGASQVNNFTYGVGFDALYNFYESKEGYNTAGLFVGFGLGGDSFIV
CCCCEEHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEE
QGESYLKSQMQICNNTAGCSASMNTSYFQMPVEFGFRSNFSKHSGIEVGLKLPLFTNQFY
ECHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCCCEEEEECCHHHHHHH
KERGVDGSVDVFYKRNFSIYFNYMINF
HHHCCCCCEEEEEECCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA