Definition Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Accession NC_008060
Length 3,294,563

Click here to switch to the map view.

The map label for this gene is 107023460

Identifier: 107023460

GI number: 107023460

Start: 2110692

End: 2111213

Strand: Reverse

Name: 107023460

Synonym: Bcen_1911

Alternate gene names: NA

Gene position: 2111213-2110692 (Counterclockwise)

Preceding gene: 107023461

Following gene: 107023459

Centisome position: 64.08

GC content: 62.64

Gene sequence:

>522_bases
GTGCATGTGCCGGCGCGGCGGGTTGAACCGTTCGCCGCCCGGCACACAAGAAAAACGCCCCGGTCGCCCGGGGCGTTTGT
CGTTGCAGGCTTGCCATTCAGACGTGAACGATTTCCCATTCGGCGATTTCGTCCGGCACTTCGAGCGTGGCCGTGTCCAG
TTCGGACGGTTGCGCGCAGTCGCCGCGGGAGATGCGGTCGGCCGCGACTTCCGGGCACGAGAACGCGCCGAGCGAGGCGT
TGCCGAACGTCGCTTCCCAGCCGCCGTTTGCCGGCAGGATGTAGAACGACCCGAGCGCTGAACCAAAGCGAAATCCCTTC
ATTTCCGTTCTCCCTTTCTGATCACGAGCGATTCTGTTGTGCCGCCTGCCGGCTCGGCCGGCTGTGGCCCGACTGGCTGC
TTGCGCCGGGTTCCGTGTCGAACGTCGTGGCGAAGCGTCAGTGCATGGAACAAAGTCTACGTCCGCGCCCCGCTCGGATG
GTGCAGGTAGAACGTCTTCTCGAAACAAAAATTCTTTTTTAA

Upstream 100 bases:

>100_bases
CGAACGTCGAGCTGACGAGCCAGGCCATGCGCCCGAGCGCGACGCTGAACGGCATCGTCGACGCGCTCGCCTGACGCCGG
CCGCGCCAGCGCGCGAGCCC

Downstream 100 bases:

>100_bases
AAACAATAATTTATTTGCGTCGTTTTGTATTGCGGAAAGTTTTTCGGCATCGCGAAACGGCGAATTTGTGCCGTGCACCA
CGAATTTTTATAACGCAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MHVPARRVEPFAARHTRKTPRSPGAFVVAGLPFRRERFPIRRFRPALRAWPCPVRTVARSRRGRCGRPRLPGTRTRRARR
CRTSLPSRRLPAGCRTTRALNQSEIPSFPFSLSDHERFCCAACRLGRLWPDWLLAPGSVSNVVAKRQCMEQSLRPRPARM
VQVERLLETKILF

Sequences:

>Translated_173_residues
MHVPARRVEPFAARHTRKTPRSPGAFVVAGLPFRRERFPIRRFRPALRAWPCPVRTVARSRRGRCGRPRLPGTRTRRARR
CRTSLPSRRLPAGCRTTRALNQSEIPSFPFSLSDHERFCCAACRLGRLWPDWLLAPGSVSNVVAKRQCMEQSLRPRPARM
VQVERLLETKILF
>Mature_173_residues
MHVPARRVEPFAARHTRKTPRSPGAFVVAGLPFRRERFPIRRFRPALRAWPCPVRTVARSRRGRCGRPRLPGTRTRRARR
CRTSLPSRRLPAGCRTTRALNQSEIPSFPFSLSDHERFCCAACRLGRLWPDWLLAPGSVSNVVAKRQCMEQSLRPRPARM
VQVERLLETKILF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20004; Mature: 20004

Theoretical pI: Translated: 12.53; Mature: 12.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVPARRVEPFAARHTRKTPRSPGAFVVAGLPFRRERFPIRRFRPALRAWPCPVRTVARS
CCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCHHHCCCHHHHHHHHHCCCCCHHHHHHH
RRGRCGRPRLPGTRTRRARRCRTSLPSRRLPAGCRTTRALNQSEIPSFPFSLSDHERFCC
HCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHCCCCCCCCCCCHHHHHH
AACRLGRLWPDWLLAPGSVSNVVAKRQCMEQSLRPRPARMVQVERLLETKILF
HHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHVPARRVEPFAARHTRKTPRSPGAFVVAGLPFRRERFPIRRFRPALRAWPCPVRTVARS
CCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCHHHCCCHHHHHHHHHCCCCCHHHHHHH
RRGRCGRPRLPGTRTRRARRCRTSLPSRRLPAGCRTTRALNQSEIPSFPFSLSDHERFCC
HCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHCCCCCCCCCCCHHHHHH
AACRLGRLWPDWLLAPGSVSNVVAKRQCMEQSLRPRPARMVQVERLLETKILF
HHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA