| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107023309
Identifier: 107023309
GI number: 107023309
Start: 1952577
End: 1953572
Strand: Reverse
Name: 107023309
Synonym: Bcen_1760
Alternate gene names: NA
Gene position: 1953572-1952577 (Counterclockwise)
Preceding gene: 107023310
Following gene: 107023308
Centisome position: 59.3
GC content: 54.82
Gene sequence:
>996_bases GTGCTATTGGTCGGGTGTGTCAGAATTGAATCCGTGAGAAAATGGATTCCGTCGAGCCTAGGGCGGCCACCCGAAAACCG GACACCTTCACCGGCTGGCTCGGCGCTCTTCGTGAAGGGCGCATATGAAGGATGCGCGATGAATCTGAATTTTTGCTGCG GGGTGCCTGATCCGGTGCGACAGGCATGCGTCGGCGTGTGTAGCGCAGATACTCCCTATCGAGAGTTGAGTGTTGAGGCT GCGAAACGGCTCGTCACAGATCCTCGGATGGAGGCGTTTTATGGGTCCGAGTCGCTTGGATGGGCTCGTGGGCCGAATGC CGATATCGCGTGGCGGCTTTGGTTCGATGCGGCGCTGGATGCTGCAAACGTTGATGAAGATGCGTCGCGCGAAGCCATCA AACGACAACGGGCGAATGTGTCGGAGCTTGTGCGAGTGCTCGATGAGGCCCGCGACCTACTCAACGAAATCGAGCGGGAA GAAACGTGCGCACCTATTTCACTACCAATAGAGTTTACCGACGTTCTGCATCTCCTTGATGCAACCGCGCAGCATCCGGG AATTGTGGGCGAGTACGACCGATCGCGATATGAGGTCAATGCGCGTCCACGCCTTGGTGAAATATTTCGCTTTAATGGTA GCTCTGCCTGCTTTATTCCGTCTGTTGCTCAACTTATAACCGGCCTGTCAGCAAGCGCATTTGGTTTGCAGGTGCAACTA GATGATCGCGCGACAATCCCTTGGCGGGGACAGTTTGCCGCTGATCAATTTACATCGCAGAAGAGCAACAAGTATCGAGC GTACGTTCGCAGCGTTGATCGGGCTATGTGGGAGCTGCGATTCGAATACACTGACGAAGATCAAGCGGAATGTTGGCGGC TTCCCGACTCGCTCCTTGCTATCCAGTGCAAAGTAGCTTTGGGTGAGGGCGACTTAGAAGGGTTTGTTGAGCGCATGCGG AAGCATCGATTGAGTTTCGAGAGTGACGAGTTATAG
Upstream 100 bases:
>100_bases CGATTGATTTTATTATGGACGAAAATACGGATTGATATCAATTTGTTGGCTGATAATTCGCGTGGGTAGTTTGTGAGAGG CGGCTTGGGATATTGTTTGA
Downstream 100 bases:
>100_bases GTCGGAAGATTTTTAAGTCGAAACGGCAAAAAACAATCCGTGTTTTCGCCCGATGTACTCCCTTAAATTGCAGGCTGTCG ATGCCAATGGTGGCACAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MLLVGCVRIESVRKWIPSSLGRPPENRTPSPAGSALFVKGAYEGCAMNLNFCCGVPDPVRQACVGVCSADTPYRELSVEA AKRLVTDPRMEAFYGSESLGWARGPNADIAWRLWFDAALDAANVDEDASREAIKRQRANVSELVRVLDEARDLLNEIERE ETCAPISLPIEFTDVLHLLDATAQHPGIVGEYDRSRYEVNARPRLGEIFRFNGSSACFIPSVAQLITGLSASAFGLQVQL DDRATIPWRGQFAADQFTSQKSNKYRAYVRSVDRAMWELRFEYTDEDQAECWRLPDSLLAIQCKVALGEGDLEGFVERMR KHRLSFESDEL
Sequences:
>Translated_331_residues MLLVGCVRIESVRKWIPSSLGRPPENRTPSPAGSALFVKGAYEGCAMNLNFCCGVPDPVRQACVGVCSADTPYRELSVEA AKRLVTDPRMEAFYGSESLGWARGPNADIAWRLWFDAALDAANVDEDASREAIKRQRANVSELVRVLDEARDLLNEIERE ETCAPISLPIEFTDVLHLLDATAQHPGIVGEYDRSRYEVNARPRLGEIFRFNGSSACFIPSVAQLITGLSASAFGLQVQL DDRATIPWRGQFAADQFTSQKSNKYRAYVRSVDRAMWELRFEYTDEDQAECWRLPDSLLAIQCKVALGEGDLEGFVERMR KHRLSFESDEL >Mature_331_residues MLLVGCVRIESVRKWIPSSLGRPPENRTPSPAGSALFVKGAYEGCAMNLNFCCGVPDPVRQACVGVCSADTPYRELSVEA AKRLVTDPRMEAFYGSESLGWARGPNADIAWRLWFDAALDAANVDEDASREAIKRQRANVSELVRVLDEARDLLNEIERE ETCAPISLPIEFTDVLHLLDATAQHPGIVGEYDRSRYEVNARPRLGEIFRFNGSSACFIPSVAQLITGLSASAFGLQVQL DDRATIPWRGQFAADQFTSQKSNKYRAYVRSVDRAMWELRFEYTDEDQAECWRLPDSLLAIQCKVALGEGDLEGFVERMR KHRLSFESDEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37062; Mature: 37062
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00014 ER_TARGET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLVGCVRIESVRKWIPSSLGRPPENRTPSPAGSALFVKGAYEGCAMNLNFCCGVPDPVR CEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEECCEEEECCCHHHH QACVGVCSADTPYRELSVEAAKRLVTDPRMEAFYGSESLGWARGPNADIAWRLWFDAALD HHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEHHHCC AANVDEDASREAIKRQRANVSELVRVLDEARDLLNEIEREETCAPISLPIEFTDVLHLLD CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHH ATAQHPGIVGEYDRSRYEVNARPRLGEIFRFNGSSACFIPSVAQLITGLSASAFGLQVQL HHHCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEE DDRATIPWRGQFAADQFTSQKSNKYRAYVRSVDRAMWELRFEYTDEDQAECWRLPDSLLA CCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHCCCCHHEE IQCKVALGEGDLEGFVERMRKHRLSFESDEL EEEEEEECCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLLVGCVRIESVRKWIPSSLGRPPENRTPSPAGSALFVKGAYEGCAMNLNFCCGVPDPVR CEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEECCEEEECCCHHHH QACVGVCSADTPYRELSVEAAKRLVTDPRMEAFYGSESLGWARGPNADIAWRLWFDAALD HHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEHHHCC AANVDEDASREAIKRQRANVSELVRVLDEARDLLNEIEREETCAPISLPIEFTDVLHLLD CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHH ATAQHPGIVGEYDRSRYEVNARPRLGEIFRFNGSSACFIPSVAQLITGLSASAFGLQVQL HHHCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEE DDRATIPWRGQFAADQFTSQKSNKYRAYVRSVDRAMWELRFEYTDEDQAECWRLPDSLLA CCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHCCCCHHEE IQCKVALGEGDLEGFVERMRKHRLSFESDEL EEEEEEECCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA