| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107023256
Identifier: 107023256
GI number: 107023256
Start: 1891787
End: 1891972
Strand: Reverse
Name: 107023256
Synonym: Bcen_1706
Alternate gene names: NA
Gene position: 1891972-1891787 (Counterclockwise)
Preceding gene: 107023257
Following gene: 107023255
Centisome position: 57.43
GC content: 72.58
Gene sequence:
>186_bases ATGGCGTCGAGAGCGTTGCGTATCGGAAAGCTGGGCGTCGCGCTGGCGCTCGTCGCGAGTCTCGCGGGCTGCGGCCTCGC GGCCGCGCCGTGCCGGGTGGCGTCGGCCGGACTCAAGATCGTGCCGCTCGTCGGCCATGTCGCCGCGGCGCCGACCGATG CGTGCGCGGATGTGATCGATCCCTGA
Upstream 100 bases:
>100_bases GGCAACCGGCGCGACCGTCGACGAAGCCCGCGAACGCGCGAAGCGCGCGGCCGCGGCCGTCCGGCCCGTGTCGGCGCGCT GACGGAACGAGGAGAGGACG
Downstream 100 bases:
>100_bases TTCCGGCAAGCCGCCGAGCCTCCCTATAAACAATAACCGCGCGCCCCGCGAGGGCGCGCTTTCCACCCGTCTCGTGAGAG GACCTGCATGATTCGCCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MASRALRIGKLGVALALVASLAGCGLAAAPCRVASAGLKIVPLVGHVAAAPTDACADVIDP
Sequences:
>Translated_61_residues MASRALRIGKLGVALALVASLAGCGLAAAPCRVASAGLKIVPLVGHVAAAPTDACADVIDP >Mature_60_residues ASRALRIGKLGVALALVASLAGCGLAAAPCRVASAGLKIVPLVGHVAAAPTDACADVIDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5835; Mature: 5704
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRALRIGKLGVALALVASLAGCGLAAAPCRVASAGLKIVPLVGHVAAAPTDACADVID CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEHHHHHHHCCCCCHHHHCCC P C >Mature Secondary Structure ASRALRIGKLGVALALVASLAGCGLAAAPCRVASAGLKIVPLVGHVAAAPTDACADVID CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEHHHHHHHCCCCCHHHHCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA