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The map label for this gene is oruR [H]

Identifier: 107023107

GI number: 107023107

Start: 1729955

End: 1731115

Strand: Reverse

Name: oruR [H]

Synonym: Bcen_1556

Alternate gene names: 107023107

Gene position: 1731115-1729955 (Counterclockwise)

Preceding gene: 107023108

Following gene: 107023106

Centisome position: 52.54

GC content: 68.3

Gene sequence:

>1161_bases
ATGAGGACGACGCGCCGCGCGGCCGCGGCTGCGCGGCTCGGTGCGCCGACGACCCCGAAGGTGGCGCGCGGGCCGCTCAA
GTACAATGCGCTCGGTTCGATCGACGGGGACGCGATGACCGGCTCAGATTCACTATCCGCCCGGCCCGGGCGTGCGCTGC
CTTCGCCGAGCGCGACGGTGCCGATCTCGCTCGTCAACGGCTTTCTCGCGAGCGCGGGCGTGCAGCGCGACGTGGTCGAG
CGCTACCTGCGCGGCGCCGGCATTCCGATCGAGCTGCTCGGCGAGCCGCATGCGCGCGTGACGGAGGAGCAGTTCTCGAC
GCTGTACCGCACGCTCGCGATCGACCTCGACGACGAGATGCCCGGCATCTTCTCGCGCCCGCTGCGCGGCGGCACGCTGA
AGTACCTGTGCCTGAGCCTGCTCGATGCGCGCAACCTCGAAACGGCGCTGCACCGTTTCGGGCAATTCTTCCATATCCTG
CTCGACGACTTCTTCGTCGAATCGAAGCGCGACGATCTCGTCGCGCAGGTGCTGCTGCGCCCGAACGACGCCATTGGGCC
GATCGGCGCGCTCGGCCAGGAGCTGATGCTCAAGCTCGTGCACGGCGTGTGCTCCTGGCTGATCGGCCAGAAGATCCCGC
TGCTGCAGATCGAGTTCGCGTGCCCGCGGCCGCGCCATGCGGTCGATCACCTGTACTTCTTCACCGGCGCCGTGCAGTTC
GACTGCGCCCGCACGCTGATGCGCTTCAGCGCCGATTACCTCGACGCGCCGATCCGGCAGAGCAAGCGCAACCTGAGCAA
GTTTCTCGCGCGTGCGCCCGGCGACTGGATCTTCGAATCGTTCAGCGAACAGCTCGTGTGCCACCGCGTGCGGCAGTACC
TGTCGGCCGCGCTGCCGGATCTGCCCGTGATCGACCAGGCGGCCGAGCACCTGCATTGTTCGGTGCGCACGCTGAGCCGT
CACCTGGCCGCCGAAGGGACGACGTTCCAGGTGCTGAAGGACGAGCTGCGGCGCGATATCGCGATCCAGCGGCTGACCGA
TACGCCGGACACGATCGCGGCGATCGGCGCCGATATCGGCTTCGACGATCCGAGCGCGTTTCATCGCGCGTTCCGGCACT
GGACGGGGAGTACGCCAGGGACGTACCGGCGTCGGGCGTGA

Upstream 100 bases:

>100_bases
TGGCCGCGTACAAGGTGCCGAAGCTTGTGCGCTTCGTCGACCGGCTGCCGAAGTCGACGGTCGGCAAGATCCTGCGCCGG
GAACTCAGCCGCACCGACTG

Downstream 100 bases:

>100_bases
CGCGGGCGCGGGGCGGTAAGTCGCAGCTTTCCGGATCGAATCCCATAAGCGGCTCCTTTTGCGGTTTTCACGGTTGATTT
TTCGGCGGACACTCCCATAA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MRTTRRAAAAARLGAPTTPKVARGPLKYNALGSIDGDAMTGSDSLSARPGRALPSPSATVPISLVNGFLASAGVQRDVVE
RYLRGAGIPIELLGEPHARVTEEQFSTLYRTLAIDLDDEMPGIFSRPLRGGTLKYLCLSLLDARNLETALHRFGQFFHIL
LDDFFVESKRDDLVAQVLLRPNDAIGPIGALGQELMLKLVHGVCSWLIGQKIPLLQIEFACPRPRHAVDHLYFFTGAVQF
DCARTLMRFSADYLDAPIRQSKRNLSKFLARAPGDWIFESFSEQLVCHRVRQYLSAALPDLPVIDQAAEHLHCSVRTLSR
HLAAEGTTFQVLKDELRRDIAIQRLTDTPDTIAAIGADIGFDDPSAFHRAFRHWTGSTPGTYRRRA

Sequences:

>Translated_386_residues
MRTTRRAAAAARLGAPTTPKVARGPLKYNALGSIDGDAMTGSDSLSARPGRALPSPSATVPISLVNGFLASAGVQRDVVE
RYLRGAGIPIELLGEPHARVTEEQFSTLYRTLAIDLDDEMPGIFSRPLRGGTLKYLCLSLLDARNLETALHRFGQFFHIL
LDDFFVESKRDDLVAQVLLRPNDAIGPIGALGQELMLKLVHGVCSWLIGQKIPLLQIEFACPRPRHAVDHLYFFTGAVQF
DCARTLMRFSADYLDAPIRQSKRNLSKFLARAPGDWIFESFSEQLVCHRVRQYLSAALPDLPVIDQAAEHLHCSVRTLSR
HLAAEGTTFQVLKDELRRDIAIQRLTDTPDTIAAIGADIGFDDPSAFHRAFRHWTGSTPGTYRRRA
>Mature_386_residues
MRTTRRAAAAARLGAPTTPKVARGPLKYNALGSIDGDAMTGSDSLSARPGRALPSPSATVPISLVNGFLASAGVQRDVVE
RYLRGAGIPIELLGEPHARVTEEQFSTLYRTLAIDLDDEMPGIFSRPLRGGTLKYLCLSLLDARNLETALHRFGQFFHIL
LDDFFVESKRDDLVAQVLLRPNDAIGPIGALGQELMLKLVHGVCSWLIGQKIPLLQIEFACPRPRHAVDHLYFFTGAVQF
DCARTLMRFSADYLDAPIRQSKRNLSKFLARAPGDWIFESFSEQLVCHRVRQYLSAALPDLPVIDQAAEHLHCSVRTLSR
HLAAEGTTFQVLKDELRRDIAIQRLTDTPDTIAAIGADIGFDDPSAFHRAFRHWTGSTPGTYRRRA

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 42724; Mature: 42724

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTTRRAAAAARLGAPTTPKVARGPLKYNALGSIDGDAMTGSDSLSARPGRALPSPSATV
CCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PISLVNGFLASAGVQRDVVERYLRGAGIPIELLGEPHARVTEEQFSTLYRTLAIDLDDEM
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
PGIFSRPLRGGTLKYLCLSLLDARNLETALHRFGQFFHILLDDFFVESKRDDLVAQVLLR
CCHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
PNDAIGPIGALGQELMLKLVHGVCSWLIGQKIPLLQIEFACPRPRHAVDHLYFFTGAVQF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
DCARTLMRFSADYLDAPIRQSKRNLSKFLARAPGDWIFESFSEQLVCHRVRQYLSAALPD
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
LPVIDQAAEHLHCSVRTLSRHLAAEGTTFQVLKDELRRDIAIQRLTDTPDTIAAIGADIG
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
FDDPSAFHRAFRHWTGSTPGTYRRRA
CCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRTTRRAAAAARLGAPTTPKVARGPLKYNALGSIDGDAMTGSDSLSARPGRALPSPSATV
CCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PISLVNGFLASAGVQRDVVERYLRGAGIPIELLGEPHARVTEEQFSTLYRTLAIDLDDEM
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
PGIFSRPLRGGTLKYLCLSLLDARNLETALHRFGQFFHILLDDFFVESKRDDLVAQVLLR
CCHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
PNDAIGPIGALGQELMLKLVHGVCSWLIGQKIPLLQIEFACPRPRHAVDHLYFFTGAVQF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
DCARTLMRFSADYLDAPIRQSKRNLSKFLARAPGDWIFESFSEQLVCHRVRQYLSAALPD
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
LPVIDQAAEHLHCSVRTLSRHLAAEGTTFQVLKDELRRDIAIQRLTDTPDTIAAIGADIG
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
FDDPSAFHRAFRHWTGSTPGTYRRRA
CCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]