| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
Click here to switch to the map view.
The map label for this gene is fabG [H]
Identifier: 107023081
GI number: 107023081
Start: 1702474
End: 1703178
Strand: Reverse
Name: fabG [H]
Synonym: Bcen_1530
Alternate gene names: 107023081
Gene position: 1703178-1702474 (Counterclockwise)
Preceding gene: 107023082
Following gene: 107023080
Centisome position: 51.7
GC content: 70.64
Gene sequence:
>705_bases GTGGCGCAACGGGAGCAGCCGGGTCTGGATTCACGTCATGCCGTCGTCACCGGTGCGTCGTCGGGAATCGGCCGCGCGAT CGTCGAGCGCCTGCTCGCCAACGGCTGGCGCGTCACCGGACTGTGCCGGTCGCACGTCGAAACGGCGCACGATTCATTGA AGATCGTGCCGGTCGACGTGACCGACTTTGCGGCGCTCGCGCCCGTATGCGACGCGCTCGGCGTGGTCGACGCGCTCGTG CATGCGGCCGGCTTCATGCGCACCGCGCCGCTCGGCCAACTGTCGCACGACGACGGCGCGGCAATGTGGCGCCTGCATGT CGAATCCGCGACCTTTCTCGCCGATCGGCTGGTGCCGCGGATGCCTCCCGGCGGCCGCATCGTGCTGCTGGGCAGCCGCA CCGCGAACGGCGCGGCCACGCGCAGCCAGTATGCGGCGACCAAATGCGCGCTGGTCGGGCTCGCACGATCGTGGGCCGCG GAACTCGCGCCGCACGGCATCACGGTCAATGTCGTCGCGCCCGGTGCGACGGACACGCCGTTCCTGCGCGATCCGGCGCG TGCGGCCACGCCGCCCAGGCTGCCGCCGATCGGGCGATTCATCACGCCCGATGAAGTCGCCGCGCTGACCGCTTTTCTGC TGAGCGCGAATGCGGGTGCGATCACCGGGCAGCAGATCGTCATGTGCGGCGGGGCGTCGCTTTAG
Upstream 100 bases:
>100_bases CGTTTCATGCGCAGGCGAGGGTCACCGTTCAGGCGGTCAGCACGAAAGCAACGGCCGCATCCGGCGGGCCGCTGCAAGTT CAAACGTAACGGGAGACATC
Downstream 100 bases:
>100_bases CGCGGCGTGCCAGGTGCGGACTTTGAGTCGCCGTGTCGCGCATAGAGTCGACGGTTCAAATATGAAGATAAATCGCGAAT ATTCGAGGCTGTGAAATGTG
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MAQREQPGLDSRHAVVTGASSGIGRAIVERLLANGWRVTGLCRSHVETAHDSLKIVPVDVTDFAALAPVCDALGVVDALV HAAGFMRTAPLGQLSHDDGAAMWRLHVESATFLADRLVPRMPPGGRIVLLGSRTANGAATRSQYAATKCALVGLARSWAA ELAPHGITVNVVAPGATDTPFLRDPARAATPPRLPPIGRFITPDEVAALTAFLLSANAGAITGQQIVMCGGASL
Sequences:
>Translated_234_residues MAQREQPGLDSRHAVVTGASSGIGRAIVERLLANGWRVTGLCRSHVETAHDSLKIVPVDVTDFAALAPVCDALGVVDALV HAAGFMRTAPLGQLSHDDGAAMWRLHVESATFLADRLVPRMPPGGRIVLLGSRTANGAATRSQYAATKCALVGLARSWAA ELAPHGITVNVVAPGATDTPFLRDPARAATPPRLPPIGRFITPDEVAALTAFLLSANAGAITGQQIVMCGGASL >Mature_233_residues AQREQPGLDSRHAVVTGASSGIGRAIVERLLANGWRVTGLCRSHVETAHDSLKIVPVDVTDFAALAPVCDALGVVDALVH AAGFMRTAPLGQLSHDDGAAMWRLHVESATFLADRLVPRMPPGGRIVLLGSRTANGAATRSQYAATKCALVGLARSWAAE LAPHGITVNVVAPGATDTPFLRDPARAATPPRLPPIGRFITPDEVAALTAFLLSANAGAITGQQIVMCGGASL
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI66933014, Length=189, Percent_Identity=29.1005291005291, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI7705925, Length=239, Percent_Identity=32.2175732217573, Blast_Score=84, Evalue=8e-17, Organism=Homo sapiens, GI40254992, Length=236, Percent_Identity=31.7796610169492, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI15277342, Length=260, Percent_Identity=28.8461538461538, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI32483357, Length=252, Percent_Identity=30.5555555555556, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=29.7959183673469, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1787335, Length=243, Percent_Identity=36.2139917695473, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1786812, Length=242, Percent_Identity=34.297520661157, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=31.7460317460317, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788459, Length=241, Percent_Identity=31.5352697095436, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI2367365, Length=230, Percent_Identity=33.0434782608696, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=27.8225806451613, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1789378, Length=249, Percent_Identity=28.9156626506024, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI87082160, Length=243, Percent_Identity=26.7489711934156, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1790717, Length=244, Percent_Identity=26.2295081967213, Blast_Score=61, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17555706, Length=246, Percent_Identity=30.0813008130081, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=30.1158301158301, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17561402, Length=257, Percent_Identity=26.0700389105058, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI25147288, Length=249, Percent_Identity=25.7028112449799, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI115534694, Length=241, Percent_Identity=29.4605809128631, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17560676, Length=245, Percent_Identity=28.9795918367347, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17565030, Length=271, Percent_Identity=29.520295202952, Blast_Score=68, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17560332, Length=257, Percent_Identity=29.9610894941634, Blast_Score=68, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17538486, Length=257, Percent_Identity=28.4046692607004, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17562904, Length=263, Percent_Identity=27.7566539923954, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17562990, Length=259, Percent_Identity=28.1853281853282, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI24643142, Length=234, Percent_Identity=30.3418803418803, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI21355319, Length=243, Percent_Identity=31.2757201646091, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI24639444, Length=245, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI23397609, Length=245, Percent_Identity=30.6122448979592, Blast_Score=64, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 24231; Mature: 24100
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQREQPGLDSRHAVVTGASSGIGRAIVERLLANGWRVTGLCRSHVETAHDSLKIVPVDV CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCEEEEEECH TDFAALAPVCDALGVVDALVHAAGFMRTAPLGQLSHDDGAAMWRLHVESATFLADRLVPR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHHHCCC MPPGGRIVLLGSRTANGAATRSQYAATKCALVGLARSWAAELAPHGITVNVVAPGATDTP CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC FLRDPARAATPPRLPPIGRFITPDEVAALTAFLLSANAGAITGQQIVMCGGASL CCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC >Mature Secondary Structure AQREQPGLDSRHAVVTGASSGIGRAIVERLLANGWRVTGLCRSHVETAHDSLKIVPVDV CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCEEEEEECH TDFAALAPVCDALGVVDALVHAAGFMRTAPLGQLSHDDGAAMWRLHVESATFLADRLVPR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHHHCCC MPPGGRIVLLGSRTANGAATRSQYAATKCALVGLARSWAAELAPHGITVNVVAPGATDTP CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC FLRDPARAATPPRLPPIGRFITPDEVAALTAFLLSANAGAITGQQIVMCGGASL CCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]