Definition Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Accession NC_008060
Length 3,294,563

Click here to switch to the map view.

The map label for this gene is fabG [H]

Identifier: 107023081

GI number: 107023081

Start: 1702474

End: 1703178

Strand: Reverse

Name: fabG [H]

Synonym: Bcen_1530

Alternate gene names: 107023081

Gene position: 1703178-1702474 (Counterclockwise)

Preceding gene: 107023082

Following gene: 107023080

Centisome position: 51.7

GC content: 70.64

Gene sequence:

>705_bases
GTGGCGCAACGGGAGCAGCCGGGTCTGGATTCACGTCATGCCGTCGTCACCGGTGCGTCGTCGGGAATCGGCCGCGCGAT
CGTCGAGCGCCTGCTCGCCAACGGCTGGCGCGTCACCGGACTGTGCCGGTCGCACGTCGAAACGGCGCACGATTCATTGA
AGATCGTGCCGGTCGACGTGACCGACTTTGCGGCGCTCGCGCCCGTATGCGACGCGCTCGGCGTGGTCGACGCGCTCGTG
CATGCGGCCGGCTTCATGCGCACCGCGCCGCTCGGCCAACTGTCGCACGACGACGGCGCGGCAATGTGGCGCCTGCATGT
CGAATCCGCGACCTTTCTCGCCGATCGGCTGGTGCCGCGGATGCCTCCCGGCGGCCGCATCGTGCTGCTGGGCAGCCGCA
CCGCGAACGGCGCGGCCACGCGCAGCCAGTATGCGGCGACCAAATGCGCGCTGGTCGGGCTCGCACGATCGTGGGCCGCG
GAACTCGCGCCGCACGGCATCACGGTCAATGTCGTCGCGCCCGGTGCGACGGACACGCCGTTCCTGCGCGATCCGGCGCG
TGCGGCCACGCCGCCCAGGCTGCCGCCGATCGGGCGATTCATCACGCCCGATGAAGTCGCCGCGCTGACCGCTTTTCTGC
TGAGCGCGAATGCGGGTGCGATCACCGGGCAGCAGATCGTCATGTGCGGCGGGGCGTCGCTTTAG

Upstream 100 bases:

>100_bases
CGTTTCATGCGCAGGCGAGGGTCACCGTTCAGGCGGTCAGCACGAAAGCAACGGCCGCATCCGGCGGGCCGCTGCAAGTT
CAAACGTAACGGGAGACATC

Downstream 100 bases:

>100_bases
CGCGGCGTGCCAGGTGCGGACTTTGAGTCGCCGTGTCGCGCATAGAGTCGACGGTTCAAATATGAAGATAAATCGCGAAT
ATTCGAGGCTGTGAAATGTG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MAQREQPGLDSRHAVVTGASSGIGRAIVERLLANGWRVTGLCRSHVETAHDSLKIVPVDVTDFAALAPVCDALGVVDALV
HAAGFMRTAPLGQLSHDDGAAMWRLHVESATFLADRLVPRMPPGGRIVLLGSRTANGAATRSQYAATKCALVGLARSWAA
ELAPHGITVNVVAPGATDTPFLRDPARAATPPRLPPIGRFITPDEVAALTAFLLSANAGAITGQQIVMCGGASL

Sequences:

>Translated_234_residues
MAQREQPGLDSRHAVVTGASSGIGRAIVERLLANGWRVTGLCRSHVETAHDSLKIVPVDVTDFAALAPVCDALGVVDALV
HAAGFMRTAPLGQLSHDDGAAMWRLHVESATFLADRLVPRMPPGGRIVLLGSRTANGAATRSQYAATKCALVGLARSWAA
ELAPHGITVNVVAPGATDTPFLRDPARAATPPRLPPIGRFITPDEVAALTAFLLSANAGAITGQQIVMCGGASL
>Mature_233_residues
AQREQPGLDSRHAVVTGASSGIGRAIVERLLANGWRVTGLCRSHVETAHDSLKIVPVDVTDFAALAPVCDALGVVDALVH
AAGFMRTAPLGQLSHDDGAAMWRLHVESATFLADRLVPRMPPGGRIVLLGSRTANGAATRSQYAATKCALVGLARSWAAE
LAPHGITVNVVAPGATDTPFLRDPARAATPPRLPPIGRFITPDEVAALTAFLLSANAGAITGQQIVMCGGASL

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI66933014, Length=189, Percent_Identity=29.1005291005291, Blast_Score=88, Evalue=8e-18,
Organism=Homo sapiens, GI7705925, Length=239, Percent_Identity=32.2175732217573, Blast_Score=84, Evalue=8e-17,
Organism=Homo sapiens, GI40254992, Length=236, Percent_Identity=31.7796610169492, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI15277342, Length=260, Percent_Identity=28.8461538461538, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI32483357, Length=252, Percent_Identity=30.5555555555556, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=29.7959183673469, Blast_Score=69, Evalue=2e-12,
Organism=Escherichia coli, GI1787335, Length=243, Percent_Identity=36.2139917695473, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1786812, Length=242, Percent_Identity=34.297520661157, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=31.7460317460317, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1788459, Length=241, Percent_Identity=31.5352697095436, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI2367365, Length=230, Percent_Identity=33.0434782608696, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=27.8225806451613, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789378, Length=249, Percent_Identity=28.9156626506024, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI87082160, Length=243, Percent_Identity=26.7489711934156, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1790717, Length=244, Percent_Identity=26.2295081967213, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17555706, Length=246, Percent_Identity=30.0813008130081, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=30.1158301158301, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17561402, Length=257, Percent_Identity=26.0700389105058, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI25147288, Length=249, Percent_Identity=25.7028112449799, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI115534694, Length=241, Percent_Identity=29.4605809128631, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17560676, Length=245, Percent_Identity=28.9795918367347, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17565030, Length=271, Percent_Identity=29.520295202952, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17560332, Length=257, Percent_Identity=29.9610894941634, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=257, Percent_Identity=28.4046692607004, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=263, Percent_Identity=27.7566539923954, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17562990, Length=259, Percent_Identity=28.1853281853282, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24643142, Length=234, Percent_Identity=30.3418803418803, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI21355319, Length=243, Percent_Identity=31.2757201646091, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24639444, Length=245, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI23397609, Length=245, Percent_Identity=30.6122448979592, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 24231; Mature: 24100

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQREQPGLDSRHAVVTGASSGIGRAIVERLLANGWRVTGLCRSHVETAHDSLKIVPVDV
CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCEEEEEECH
TDFAALAPVCDALGVVDALVHAAGFMRTAPLGQLSHDDGAAMWRLHVESATFLADRLVPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHHHCCC
MPPGGRIVLLGSRTANGAATRSQYAATKCALVGLARSWAAELAPHGITVNVVAPGATDTP
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
FLRDPARAATPPRLPPIGRFITPDEVAALTAFLLSANAGAITGQQIVMCGGASL
CCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure 
AQREQPGLDSRHAVVTGASSGIGRAIVERLLANGWRVTGLCRSHVETAHDSLKIVPVDV
CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCEEEEEECH
TDFAALAPVCDALGVVDALVHAAGFMRTAPLGQLSHDDGAAMWRLHVESATFLADRLVPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHHHCCC
MPPGGRIVLLGSRTANGAATRSQYAATKCALVGLARSWAAELAPHGITVNVVAPGATDTP
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
FLRDPARAATPPRLPPIGRFITPDEVAALTAFLLSANAGAITGQQIVMCGGASL
CCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]