| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107023036
Identifier: 107023036
GI number: 107023036
Start: 1648644
End: 1649597
Strand: Reverse
Name: 107023036
Synonym: Bcen_1484
Alternate gene names: NA
Gene position: 1649597-1648644 (Counterclockwise)
Preceding gene: 107023037
Following gene: 107023035
Centisome position: 50.07
GC content: 67.71
Gene sequence:
>954_bases ATGAGTTCATTCAACCTGCGCAACCTGCTGCGCATCACCGCCGCGGCGTCGGCCGTGCTCGCCGCGCTGCTGGCCGGCAC GCCGGCGCTCGCCGACGAAACCCACCTCGACGACATCGCGTCGCCGGCCGCCGCGGCGCGGTCGCCGGCCATTGCGGTCG GCCCGCAGTACGACACGACGCACGTGTGCGTCGCCCCCGAAGACTTCGACCGCTTCACCGACAGCTTCGTCGCGACCTTC GGCGGCAAGAAGTCGAAGCAGGGTGTGTTCCAGGTCACGCCGACGCCGAGCCAGACGATGTCGCAACTGGTGCTGACGCC GGTCGGTACGATCTCGGTGTTCGGCTTCAAGACGCCGATTCCGTATCCGTTCTGCGAGGAACGCACCGGCTATCTCGTGA CCGACATGGACGTCGCGGTGAAGTCGGCGCGTGCGCATGGCGCGGACATCGTCGTGTCGACGTTTCCCGACCCGATCGGG CGCGACGCGATCGTTCGCTGGCCGGGCGGCGTGAACATGCAGCTGTACTGGCACACGCAGGCGCCGAATTACGACGCGCT GCAGACCGTGCCGGAGAATCGCGTGTACGTGTCGCCGGAAAGCGCGAGCAAGCTCGCACGCAACTTCGCCGCGTTCTCGC ACGGCAAGATCGTGTCGGACGTGCGCCATGCGCCGGGCATCGAGATCGGCCGGCCGAACGACACGTACCGCCGCATTCGC ATCGAATCGGGCTTCGGCAAGATGACCGTGCTCGCGACCGACGGTCACCTGCCGTACCCGTTCGGGCGTGAAATGACCGG CTACGAAGTGGCCGATCTCGCCGCGACGCTGAAGCAGGCCGAAGCCGCGGGCGTGACGGTGCTGGTACCGCCGTTCAAGT CGGACGGCCGCGACGCGGCGCTCGTGCAGTTCCCGGGCGGCTACGTCGCCGAAATCCACGCGCGGTCGAAATGA
Upstream 100 bases:
>100_bases GCCTGTCGTCCGGGCCGCCCGGATGAGTCGCCTGCATCCCGCTGAATCAGAATCCGCGCGCGGCGCCAGGCCGCGCGCGT CAACATCACGGAGAAAACCA
Downstream 100 bases:
>100_bases CGGTGCGCCGGCCGATGAAGCGATCGTGGCGCGGCGCGCTGCCGTGCGTCGTGCTGGCGGGCGGCGCCGCGTTGCATGCG GGTTCGGCCGTCGGCGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSSFNLRNLLRITAAASAVLAALLAGTPALADETHLDDIASPAAAARSPAIAVGPQYDTTHVCVAPEDFDRFTDSFVATF GGKKSKQGVFQVTPTPSQTMSQLVLTPVGTISVFGFKTPIPYPFCEERTGYLVTDMDVAVKSARAHGADIVVSTFPDPIG RDAIVRWPGGVNMQLYWHTQAPNYDALQTVPENRVYVSPESASKLARNFAAFSHGKIVSDVRHAPGIEIGRPNDTYRRIR IESGFGKMTVLATDGHLPYPFGREMTGYEVADLAATLKQAEAAGVTVLVPPFKSDGRDAALVQFPGGYVAEIHARSK
Sequences:
>Translated_317_residues MSSFNLRNLLRITAAASAVLAALLAGTPALADETHLDDIASPAAAARSPAIAVGPQYDTTHVCVAPEDFDRFTDSFVATF GGKKSKQGVFQVTPTPSQTMSQLVLTPVGTISVFGFKTPIPYPFCEERTGYLVTDMDVAVKSARAHGADIVVSTFPDPIG RDAIVRWPGGVNMQLYWHTQAPNYDALQTVPENRVYVSPESASKLARNFAAFSHGKIVSDVRHAPGIEIGRPNDTYRRIR IESGFGKMTVLATDGHLPYPFGREMTGYEVADLAATLKQAEAAGVTVLVPPFKSDGRDAALVQFPGGYVAEIHARSK >Mature_316_residues SSFNLRNLLRITAAASAVLAALLAGTPALADETHLDDIASPAAAARSPAIAVGPQYDTTHVCVAPEDFDRFTDSFVATFG GKKSKQGVFQVTPTPSQTMSQLVLTPVGTISVFGFKTPIPYPFCEERTGYLVTDMDVAVKSARAHGADIVVSTFPDPIGR DAIVRWPGGVNMQLYWHTQAPNYDALQTVPENRVYVSPESASKLARNFAAFSHGKIVSDVRHAPGIEIGRPNDTYRRIRI ESGFGKMTVLATDGHLPYPFGREMTGYEVADLAATLKQAEAAGVTVLVPPFKSDGRDAALVQFPGGYVAEIHARSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34010; Mature: 33879
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFNLRNLLRITAAASAVLAALLAGTPALADETHLDDIASPAAAARSPAIAVGPQYDTT CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHCCCEEEECCCCCCE HVCVAPEDFDRFTDSFVATFGGKKSKQGVFQVTPTPSQTMSQLVLTPVGTISVFGFKTPI EEEECCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEEECCCC PYPFCEERTGYLVTDMDVAVKSARAHGADIVVSTFPDPIGRDAIVRWPGGVNMQLYWHTQ CCCCCCCCCCEEEEEHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCCCEEEEEEEEC APNYDALQTVPENRVYVSPESASKLARNFAAFSHGKIVSDVRHAPGIEIGRPNDTYRRIR CCCCHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEE IESGFGKMTVLATDGHLPYPFGREMTGYEVADLAATLKQAEAAGVTVLVPPFKSDGRDAA EECCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEE LVQFPGGYVAEIHARSK EEECCCCEEEEEEECCC >Mature Secondary Structure SSFNLRNLLRITAAASAVLAALLAGTPALADETHLDDIASPAAAARSPAIAVGPQYDTT CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHCCCEEEECCCCCCE HVCVAPEDFDRFTDSFVATFGGKKSKQGVFQVTPTPSQTMSQLVLTPVGTISVFGFKTPI EEEECCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEEECCCC PYPFCEERTGYLVTDMDVAVKSARAHGADIVVSTFPDPIGRDAIVRWPGGVNMQLYWHTQ CCCCCCCCCCEEEEEHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCCCEEEEEEEEC APNYDALQTVPENRVYVSPESASKLARNFAAFSHGKIVSDVRHAPGIEIGRPNDTYRRIR CCCCHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEE IESGFGKMTVLATDGHLPYPFGREMTGYEVADLAATLKQAEAAGVTVLVPPFKSDGRDAA EECCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEE LVQFPGGYVAEIHARSK EEECCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA