| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is phoP [C]
Identifier: 107023014
GI number: 107023014
Start: 1618902
End: 1620707
Strand: Reverse
Name: phoP [C]
Synonym: Bcen_1462
Alternate gene names: 107023014
Gene position: 1620707-1618902 (Counterclockwise)
Preceding gene: 107023015
Following gene: 107023013
Centisome position: 49.19
GC content: 70.76
Gene sequence:
>1806_bases ATGATCCGGATTGGAACACTTCACGTTTTTCTCGACAGACGTGAAATTCGTTCGAACGGCAAGCTGCTGCGCATCGGCAG CCGCGCATTCGAAATTCTCGAGCTGTTGATTCGGGCGAACGGTGCGCTGGTATCGAAAGACGACATCATGCAGCGCGTAT GGCCGCACACCGTGGTGGAGGAAAACAACCTGCAGGTGCACATCGCGTCGCTGCGCAAGGCGCTGGCCGGCGACCGCAAC CTGATCGTGACGGTGCCGGGCCGAGGCTATCGGCTGGTCGCCGGGCAGGACGACGGCGATGCGCCCGTGCGTCCCGCGAC GTGGCGGCCGTCCGCGGCGCCGAGCACGCTGTTCGGCCGCGAACAGACGGTCGCCGACGTGCTGGCCGCGCTGCAGGGCG CGCGCGTCGTGACGCTGGTCGGCGCGGGCGGCATCGGCAAGACGCGCGTCGCGATCGAAGCGGCGGCGCGCGCCGACGCA CGCTTTCCGGAAGGCACCGTATTCGTTTCGCTCGCGACCGTCGCGTGTCCGCGCTTCGTGCCGGACGCGCTGGCCGGCGC GTTCGGCATCACGCAGCCGACCGGGTCGCTGACCCTCGAAGCGGTGCTCGCCAGCGTCGCACGTCGCCGGATGCTGCTCG TGCTCGACAATTGCGAGCACCTGCTCGACGCCGCCGCGCAAATCGCGAGCGCGCTCACCGATGCGGACGACGGGCTGTGC GTGCTCGCGACGAGCCGCGAATCGCTGCGCATCCACGGCGAGCGCGTGTGCCCGGTGCCGCCGCTCGACGTCCCCGACGA AGGTGCCGGTGATCGCGAGGCGATGAATGCCAGCGCGGTGCAGTTGTTCGCGGCGCGGGCCCGCGCGGCCGATCCGCGTT TTCCGCTCGACGCGCGCAGCCTGGCGTTGATGGCGTCGGTCTGCCGTCGGCTCGACGGCCTGCCGCTCGCGATCGAGCTG GCGGCGGCCCGCGCCGCCGTGCTGGGCATCGACGTGCTGGCCGCCCATCTCGACGATCACTTTCGGCTGCTGACCGGCGG TTTTCGCACCGCGTTGCCGCGCCACCAGACGCTGCAGGCGATGTACGACTGGAGCTACCGGTTGCTCGGAGACGCTGAGC GCCTGCTGCTGCGATGGCTCGGCGTGTTTCGCGACGGTTTCTCGATCGAGGCCGTGCGCGAGGTCGTCGGCGCCAACGGG CTGGCCGGCGCCGATCTGCTCGATACGATCGCCGGCCTCGTGTCGAAATCGCTGGTGATCCTCGAAACCGCGCACGGCGT GCCGCGCTACCGGCTGCTGACGACCACGCGGGCCTACGCGCAACAGCAGCTCGACAGTCACGGCGAGGGCGCGGCCGCGG CGCGCGCGCACGCGACCTACTTCCTCGCGTTGTTCCGGCGCGCGGCCCACGATGGCGACGCGCCGGGCAGCGGGCCGGAG GGCGCGACCCGGCTGGATGCGGTCCGGCGCGAGCTCGGCAATCTGCGTGCCGCGCTCGACTGGGCATTTTCGGCGCAGGG CGACGCGGCGCTCGGCATCGCGCTTACGGCCGTCGCGGTGCCGTGCCTGTTCGATCTGTCGCTCGTCGACGAATGTCGCG AGCGCGCGCGCGTCGCGCTCGATGCGATGCGCGACGCGGATGCAACCGGGGTGTCCGACGATGCGCGCGTGCGGGTGCTG GCTGCGTATGCGGCGGCGCTCGCGCATACCGCAGGGTCGACGCAGGTCGTGCACGATGCGTGGTCGGAGGTGCATGCACT CGGATTCGATGCGGCCGAGGCCGAACTGCCGTCGCGCGAGTCGTGA
Upstream 100 bases:
>100_bases TAATTTGAATCATTCGACCATGCAAATACCGTAGCATTGATGCGGAACCGGCACCCGATTTCAGTGGGGCGCCGTTGAAT GTCACCCTCAAGAAATTCTC
Downstream 100 bases:
>100_bases CGCCGGCTTCGTGCGCGTCTCCCGTATTTCAGAACGATTCAGCCCGGATACAGGACGGCGGCGGGCGGCGCGCGTAGATT GCGTGAACGGCGCGTGCCGA
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 601; Mature: 601
Protein sequence:
>601_residues MIRIGTLHVFLDRREIRSNGKLLRIGSRAFEILELLIRANGALVSKDDIMQRVWPHTVVEENNLQVHIASLRKALAGDRN LIVTVPGRGYRLVAGQDDGDAPVRPATWRPSAAPSTLFGREQTVADVLAALQGARVVTLVGAGGIGKTRVAIEAAARADA RFPEGTVFVSLATVACPRFVPDALAGAFGITQPTGSLTLEAVLASVARRRMLLVLDNCEHLLDAAAQIASALTDADDGLC VLATSRESLRIHGERVCPVPPLDVPDEGAGDREAMNASAVQLFAARARAADPRFPLDARSLALMASVCRRLDGLPLAIEL AAARAAVLGIDVLAAHLDDHFRLLTGGFRTALPRHQTLQAMYDWSYRLLGDAERLLLRWLGVFRDGFSIEAVREVVGANG LAGADLLDTIAGLVSKSLVILETAHGVPRYRLLTTTRAYAQQQLDSHGEGAAAARAHATYFLALFRRAAHDGDAPGSGPE GATRLDAVRRELGNLRAALDWAFSAQGDAALGIALTAVAVPCLFDLSLVDECRERARVALDAMRDADATGVSDDARVRVL AAYAAALAHTAGSTQVVHDAWSEVHALGFDAAEAELPSRES
Sequences:
>Translated_601_residues MIRIGTLHVFLDRREIRSNGKLLRIGSRAFEILELLIRANGALVSKDDIMQRVWPHTVVEENNLQVHIASLRKALAGDRN LIVTVPGRGYRLVAGQDDGDAPVRPATWRPSAAPSTLFGREQTVADVLAALQGARVVTLVGAGGIGKTRVAIEAAARADA RFPEGTVFVSLATVACPRFVPDALAGAFGITQPTGSLTLEAVLASVARRRMLLVLDNCEHLLDAAAQIASALTDADDGLC VLATSRESLRIHGERVCPVPPLDVPDEGAGDREAMNASAVQLFAARARAADPRFPLDARSLALMASVCRRLDGLPLAIEL AAARAAVLGIDVLAAHLDDHFRLLTGGFRTALPRHQTLQAMYDWSYRLLGDAERLLLRWLGVFRDGFSIEAVREVVGANG LAGADLLDTIAGLVSKSLVILETAHGVPRYRLLTTTRAYAQQQLDSHGEGAAAARAHATYFLALFRRAAHDGDAPGSGPE GATRLDAVRRELGNLRAALDWAFSAQGDAALGIALTAVAVPCLFDLSLVDECRERARVALDAMRDADATGVSDDARVRVL AAYAAALAHTAGSTQVVHDAWSEVHALGFDAAEAELPSRES >Mature_601_residues MIRIGTLHVFLDRREIRSNGKLLRIGSRAFEILELLIRANGALVSKDDIMQRVWPHTVVEENNLQVHIASLRKALAGDRN LIVTVPGRGYRLVAGQDDGDAPVRPATWRPSAAPSTLFGREQTVADVLAALQGARVVTLVGAGGIGKTRVAIEAAARADA RFPEGTVFVSLATVACPRFVPDALAGAFGITQPTGSLTLEAVLASVARRRMLLVLDNCEHLLDAAAQIASALTDADDGLC VLATSRESLRIHGERVCPVPPLDVPDEGAGDREAMNASAVQLFAARARAADPRFPLDARSLALMASVCRRLDGLPLAIEL AAARAAVLGIDVLAAHLDDHFRLLTGGFRTALPRHQTLQAMYDWSYRLLGDAERLLLRWLGVFRDGFSIEAVREVVGANG LAGADLLDTIAGLVSKSLVILETAHGVPRYRLLTTTRAYAQQQLDSHGEGAAAARAHATYFLALFRRAAHDGDAPGSGPE GATRLDAVRRELGNLRAALDWAFSAQGDAALGIALTAVAVPCLFDLSLVDECRERARVALDAMRDADATGVSDDARVRVL AAYAAALAHTAGSTQVVHDAWSEVHALGFDAAEAELPSRES
Specific function: Member Of The Two-Component Regulatory System Phoq/Phop Involved In The Regulation Of Acid Phosphatase. [C]
COG id: COG3903
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000767 - InterPro: IPR016032 - InterPro: IPR011990 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE [H]
EC number: NA
Molecular weight: Translated: 63947; Mature: 63947
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRIGTLHVFLDRREIRSNGKLLRIGSRAFEILELLIRANGALVSKDDIMQRVWPHTVVE CEEEEEEEEEEEHHHHHCCCCEEEECHHHHHHHHHHHHCCCCEECHHHHHHHHCCCCEEE ENNLQVHIASLRKALAGDRNLIVTVPGRGYRLVAGQDDGDAPVRPATWRPSAAPSTLFGR CCCCEEEHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHCCC EQTVADVLAALQGARVVTLVGAGGIGKTRVAIEAAARADARFPEGTVFVSLATVACPRFV HHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEEHHHHCHHHH PDALAGAFGITQPTGSLTLEAVLASVARRRMLLVLDNCEHLLDAAAQIASALTDADDGLC HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHCCCCCCEE VLATSRESLRIHGERVCPVPPLDVPDEGAGDREAMNASAVQLFAARARAADPRFPLDARS EEEECCCCEEECCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LALMASVCRRLDGLPLAIELAAARAAVLGIDVLAAHLDDHFRLLTGGFRTALPRHQTLQA HHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHH MYDWSYRLLGDAERLLLRWLGVFRDGFSIEAVREVVGANGLAGADLLDTIAGLVSKSLVI HHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEE LETAHGVPRYRLLTTTRAYAQQQLDSHGEGAAAARAHATYFLALFRRAAHDGDAPGSGPE EEECCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GATRLDAVRRELGNLRAALDWAFSAQGDAALGIALTAVAVPCLFDLSLVDECRERARVAL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAMRDADATGVSDDARVRVLAAYAAALAHTAGSTQVVHDAWSEVHALGFDAAEAELPSRE HHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCC S C >Mature Secondary Structure MIRIGTLHVFLDRREIRSNGKLLRIGSRAFEILELLIRANGALVSKDDIMQRVWPHTVVE CEEEEEEEEEEEHHHHHCCCCEEEECHHHHHHHHHHHHCCCCEECHHHHHHHHCCCCEEE ENNLQVHIASLRKALAGDRNLIVTVPGRGYRLVAGQDDGDAPVRPATWRPSAAPSTLFGR CCCCEEEHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHCCC EQTVADVLAALQGARVVTLVGAGGIGKTRVAIEAAARADARFPEGTVFVSLATVACPRFV HHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEEHHHHCHHHH PDALAGAFGITQPTGSLTLEAVLASVARRRMLLVLDNCEHLLDAAAQIASALTDADDGLC HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHCCCCCCEE VLATSRESLRIHGERVCPVPPLDVPDEGAGDREAMNASAVQLFAARARAADPRFPLDARS EEEECCCCEEECCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LALMASVCRRLDGLPLAIELAAARAAVLGIDVLAAHLDDHFRLLTGGFRTALPRHQTLQA HHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHH MYDWSYRLLGDAERLLLRWLGVFRDGFSIEAVREVVGANGLAGADLLDTIAGLVSKSLVI HHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEE LETAHGVPRYRLLTTTRAYAQQQLDSHGEGAAAARAHATYFLALFRRAAHDGDAPGSGPE EEECCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GATRLDAVRRELGNLRAALDWAFSAQGDAALGIALTAVAVPCLFDLSLVDECRERARVAL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAMRDADATGVSDDARVRVLAAYAAALAHTAGSTQVVHDAWSEVHALGFDAAEAELPSRE HHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]