| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is yeaS [C]
Identifier: 107023000
GI number: 107023000
Start: 1605051
End: 1605701
Strand: Reverse
Name: yeaS [C]
Synonym: Bcen_1448
Alternate gene names: 107023000
Gene position: 1605701-1605051 (Counterclockwise)
Preceding gene: 107023002
Following gene: 107022997
Centisome position: 48.74
GC content: 68.97
Gene sequence:
>651_bases ATGACACTCCATTACCCGCTGCTGTTTGCCTATCTGGCCGCGATCGTGCTGCTCATCGCGACGCCCGGCCCGGTCGTCAT GCTCGTCACGGGCACGGTTGCGCGGCGCGGGTTCCGTCAAGGCGTGCTGACCGCGGTGGGCGCGAATGCGGCGAGCCTCG TGCTGATCGCGGGCGCGATGCTGATGGTGTTCGGCGTCGTGATGGTCAGCGCTCGGCTGCTCGCCGGGCTGCACGTCGCG GGTTGCCTGTTCATCGCGGTGCTCGCGATCCGGACGCTGGTCGGCGAATGGCGCGCCGGTCGCGGGCGCAGTGGCGACGG CACGGCGGCGGGCGAACCGGCGTCACGGCCGCGCGGGTTGCCCGGCGTCGTGCGCGGCTTCCTCGTCGGCATCGCGAATC CGAAGGATGTGCTGTTCTTCGTCGCGTTCTTTCCGCAGTTCGTCGGCATCACGCCCGATTCGCGCGTGAGCCTCGCGATC CTCGCTGCGTTGTGGATCGCGGTCGATTTCACGATCATGACCGGCTACATGGCCGCGATCAACCATCCGGCGATTCATCG GAAGCAGCGGTGGATCTCGGCGTCGTCGGCGCTTGCGCTGCTCGCGATTGCGCTCGCCGGGCTCGGCGGCACGATCGCGA GCGTCGCGTAG
Upstream 100 bases:
>100_bases GCGCGTGATACTGCTCGTCACCGCGCTTTTTGTCACATCGTGGCCCCCATGATGCCACCGTGACGGGCACGCCTGCCGAC TCATCGAACAACTTTTTGTC
Downstream 100 bases:
>100_bases CGGGTCGGCGATTGGCGTTACGCTTCGTTGGCGCCCGCTAATCGTTGCGCAGGAACACGACGTAGCCGCGGAACCACGGA TTCGACGCGAGATACGGCGG
Product: lysine exporter protein LysE/YggA
Products: NA
Alternate protein names: Lysine Exporter Protein; Amino Acid Transporter LysE; Amino-Acid Efflux Transmembrane Protein; Amino Acid Efflux Protein; Threonine Efflux Protein; LysE-Family Transporter; Lysine Exporter Family Protein; Transporter LysE Family; LysE Type Translocator Family Protein; Leucine Efflux Protein; Amino-Acid Efflux Protein; RhtB Family Transporter; Transporter LysE Family Protein; Homoserine/Homoserine Lactone/Threonine Efflux Protein; LysE Family Transporter; Transmembrane Efflux Transporter Protein
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MTLHYPLLFAYLAAIVLLIATPGPVVMLVTGTVARRGFRQGVLTAVGANAASLVLIAGAMLMVFGVVMVSARLLAGLHVA GCLFIAVLAIRTLVGEWRAGRGRSGDGTAAGEPASRPRGLPGVVRGFLVGIANPKDVLFFVAFFPQFVGITPDSRVSLAI LAALWIAVDFTIMTGYMAAINHPAIHRKQRWISASSALALLAIALAGLGGTIASVA
Sequences:
>Translated_216_residues MTLHYPLLFAYLAAIVLLIATPGPVVMLVTGTVARRGFRQGVLTAVGANAASLVLIAGAMLMVFGVVMVSARLLAGLHVA GCLFIAVLAIRTLVGEWRAGRGRSGDGTAAGEPASRPRGLPGVVRGFLVGIANPKDVLFFVAFFPQFVGITPDSRVSLAI LAALWIAVDFTIMTGYMAAINHPAIHRKQRWISASSALALLAIALAGLGGTIASVA >Mature_215_residues TLHYPLLFAYLAAIVLLIATPGPVVMLVTGTVARRGFRQGVLTAVGANAASLVLIAGAMLMVFGVVMVSARLLAGLHVAG CLFIAVLAIRTLVGEWRAGRGRSGDGTAAGEPASRPRGLPGVVRGFLVGIANPKDVLFFVAFFPQFVGITPDSRVSLAIL AALWIAVDFTIMTGYMAAINHPAIHRKQRWISASSALALLAIALAGLGGTIASVA
Specific function: Unknown
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22342; Mature: 22211
Theoretical pI: Translated: 11.97; Mature: 11.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLHYPLLFAYLAAIVLLIATPGPVVMLVTGTVARRGFRQGVLTAVGANAASLVLIAGAM CCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LMVFGVVMVSARLLAGLHVAGCLFIAVLAIRTLVGEWRAGRGRSGDGTAAGEPASRPRGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PGVVRGFLVGIANPKDVLFFVAFFPQFVGITPDSRVSLAILAALWIAVDFTIMTGYMAAI HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NHPAIHRKQRWISASSALALLAIALAGLGGTIASVA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC >Mature Secondary Structure TLHYPLLFAYLAAIVLLIATPGPVVMLVTGTVARRGFRQGVLTAVGANAASLVLIAGAM CCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LMVFGVVMVSARLLAGLHVAGCLFIAVLAIRTLVGEWRAGRGRSGDGTAAGEPASRPRGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PGVVRGFLVGIANPKDVLFFVAFFPQFVGITPDSRVSLAILAALWIAVDFTIMTGYMAAI HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NHPAIHRKQRWISASSALALLAIALAGLGGTIASVA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA