| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107022988
Identifier: 107022988
GI number: 107022988
Start: 1592050
End: 1592964
Strand: Reverse
Name: 107022988
Synonym: Bcen_1436
Alternate gene names: NA
Gene position: 1592964-1592050 (Counterclockwise)
Preceding gene: 107022989
Following gene: 107022985
Centisome position: 48.35
GC content: 67.54
Gene sequence:
>915_bases ATGGAGACATCCGGACCTTCACGCGGCACGCGGCATGCGCGCCGCGTCTGGCACGCGCTCGTCGCGACCCTGTGCGTGGG CTGGAGCGCGCTGTCGTTCGGCGCAGAGGGCGCGAACGGCGCGGCCGCGCTGCTCGAGCGCTACCGCAGCCTCGGCGCGC AATTGAAGGACAACGCGTTTCACCGGCCCGTGGTCCTCGAATCGTCGGAGGCATCGTCGTCGCTGAAGGGCGACATCTAT GCGGTCGTCGATTATCCGTTCGCGGTCGTGAACGGCCAGCTCAACGATCCCGCGCAAGGCCCCGCGAACTGGTGCGCGGT GCTGATCCTGCACCTGAACACGAAGTACTGTCACGCGTCGAGCGGCGGCAACGGCCCGGTGCTCGACGTGAACCTCGGCC GCAAGATCGAGCAGAAGCTGTCGGACACCTATCGCGTGCAGTTCCGCTATCGCGTGGCGGCCGCGACGCCCGACTATTTC CAGGTGGACCTGACCGCCGACAGCGGCCCGATGGGTACGAAGGATTACCGGATCGCGCTGGAGGCCGTGCCGGTCGGCGC GTCGCGCACGTTCCTGCATCTCACGTATTCGTATGGCTTCGGCACGGTCGGCCGGATGGCGATGAAGACCTACCTCGCGA CGGTCGGCAGCGACAAGGTCGGGTTCACGAACGTCGGCGCGGCCGCGCAGCCGCAGTACGTCGGCGGCGTGCGCGGGCTG CTGGAGCGCAACACGATGCGCTACTACCTCGCGATCGACACGTATCTCGCGACGCTCGACAAGCCGGTCGACCAGCGCCT CGCGCGCTGGTTCGACGCGACCGAGCAGTATCCGCAGCAACTGCACGAAGTGGAGCGCGGCGCGTATCTGCAGATGAAAG CGCAGGAGGTGCAGCGGCAGCAGACGGCGCGATAG
Upstream 100 bases:
>100_bases GCGGCCGATGACGATCATGCTGCATGCGACGTCACGCCCGCAGCGGCAGGCGTATTCTGTGACACATGCGCGCGACCATC GTGCGCCACGGAGTAAACAC
Downstream 100 bases:
>100_bases GCGGCGCCTGCCGCCTGTCGCCCGGCGTCGATCAGTTCGACGCGCCGCCGACCGTGCGAATGCTGTGCCATTGCCCCTGT TCGACGCGGAACAGCGTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; NAD/FAD-Utilizing
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues METSGPSRGTRHARRVWHALVATLCVGWSALSFGAEGANGAAALLERYRSLGAQLKDNAFHRPVVLESSEASSSLKGDIY AVVDYPFAVVNGQLNDPAQGPANWCAVLILHLNTKYCHASSGGNGPVLDVNLGRKIEQKLSDTYRVQFRYRVAAATPDYF QVDLTADSGPMGTKDYRIALEAVPVGASRTFLHLTYSYGFGTVGRMAMKTYLATVGSDKVGFTNVGAAAQPQYVGGVRGL LERNTMRYYLAIDTYLATLDKPVDQRLARWFDATEQYPQQLHEVERGAYLQMKAQEVQRQQTAR
Sequences:
>Translated_304_residues METSGPSRGTRHARRVWHALVATLCVGWSALSFGAEGANGAAALLERYRSLGAQLKDNAFHRPVVLESSEASSSLKGDIY AVVDYPFAVVNGQLNDPAQGPANWCAVLILHLNTKYCHASSGGNGPVLDVNLGRKIEQKLSDTYRVQFRYRVAAATPDYF QVDLTADSGPMGTKDYRIALEAVPVGASRTFLHLTYSYGFGTVGRMAMKTYLATVGSDKVGFTNVGAAAQPQYVGGVRGL LERNTMRYYLAIDTYLATLDKPVDQRLARWFDATEQYPQQLHEVERGAYLQMKAQEVQRQQTAR >Mature_304_residues METSGPSRGTRHARRVWHALVATLCVGWSALSFGAEGANGAAALLERYRSLGAQLKDNAFHRPVVLESSEASSSLKGDIY AVVDYPFAVVNGQLNDPAQGPANWCAVLILHLNTKYCHASSGGNGPVLDVNLGRKIEQKLSDTYRVQFRYRVAAATPDYF QVDLTADSGPMGTKDYRIALEAVPVGASRTFLHLTYSYGFGTVGRMAMKTYLATVGSDKVGFTNVGAAAQPQYVGGVRGL LERNTMRYYLAIDTYLATLDKPVDQRLARWFDATEQYPQQLHEVERGAYLQMKAQEVQRQQTAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33393; Mature: 33393
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METSGPSRGTRHARRVWHALVATLCVGWSALSFGAEGANGAAALLERYRSLGAQLKDNAF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHCCCCC HRPVVLESSEASSSLKGDIYAVVDYPFAVVNGQLNDPAQGPANWCAVLILHLNTKYCHAS CCCEEEECCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCHHHHHEEEEEEECCCEEECC SGGNGPVLDVNLGRKIEQKLSDTYRVQFRYRVAAATPDYFQVDLTADSGPMGTKDYRIAL CCCCCCEEEECCCHHHHHHHCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEE EAVPVGASRTFLHLTYSYGFGTVGRMAMKTYLATVGSDKVGFTNVGAAAQPQYVGGVRGL EEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH LERNTMRYYLAIDTYLATLDKPVDQRLARWFDATEQYPQQLHEVERGAYLQMKAQEVQRQ HHCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHH QTAR HCCC >Mature Secondary Structure METSGPSRGTRHARRVWHALVATLCVGWSALSFGAEGANGAAALLERYRSLGAQLKDNAF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHCCCCC HRPVVLESSEASSSLKGDIYAVVDYPFAVVNGQLNDPAQGPANWCAVLILHLNTKYCHAS CCCEEEECCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCHHHHHEEEEEEECCCEEECC SGGNGPVLDVNLGRKIEQKLSDTYRVQFRYRVAAATPDYFQVDLTADSGPMGTKDYRIAL CCCCCCEEEECCCHHHHHHHCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEE EAVPVGASRTFLHLTYSYGFGTVGRMAMKTYLATVGSDKVGFTNVGAAAQPQYVGGVRGL EEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH LERNTMRYYLAIDTYLATLDKPVDQRLARWFDATEQYPQQLHEVERGAYLQMKAQEVQRQ HHCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHH QTAR HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA