| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107022969
Identifier: 107022969
GI number: 107022969
Start: 1568570
End: 1569103
Strand: Reverse
Name: 107022969
Synonym: Bcen_1417
Alternate gene names: NA
Gene position: 1569103-1568570 (Counterclockwise)
Preceding gene: 107022970
Following gene: 107022968
Centisome position: 47.63
GC content: 57.12
Gene sequence:
>534_bases ATGGATACCTGGGCGAGCGCCGGCGGGGAAACGACCGTCGATGCCGTATTGGCGCAAGTCCGAAACTGGTTGTCCGGCGC CACCGGCATCACGATTTCGGGCGGCGAACCGTTCGATCAGCCTGACGCGCTGATTCACCTTCTGCAGGGTCTGCGGAAAT TATCGGCTTGCGACATTCTCGTCTACAGCGGCCACCCGATCGAGTCGCTGGCCGATACCCTGACACGCGCCGACGGTCTG ATCGACGTACTGATCTCCGATGCATTTGACATCGATGCGCCACAGACACGCCCGTTGCGTGGTAGTGACAATCAGCGGTT ACATTGCCTGACCGCACTCGGCCGTGCCGGTTTTTCGCATTATGAATCCATGTCGAAGAAGCCGGGTAAAGCACTCGACG TGATGTTCGATGAAGACGGTAGTGTCTGGTTTGCGGGGATACCGGACCGTGACGATTTTCAACGCTTGAGAGACCTATTG ATCGATCAGGGCCATCAAGTCCGGATCAGCGCCGACAAGGCGAAAAACAAATAA
Upstream 100 bases:
>100_bases TATTTCGCGCCTTCATTTTCCCGTTACGACACTCGGACCGGGGCAGCGGATCGGAATCTGGTTTCAGGGTTGCTCGATTC GATGCCCCGGGTGTATTTCG
Downstream 100 bases:
>100_bases GACAGGAAATGTCAGCCATGATGCGTTTTTGTCCGAATTGCCAGACCGAGCGGTCGGTCGACGAGTGGTTTTGTGCCGGT ACGATCGGCTCCGCTTCCTG
Product: organic radical activating enzyme family protein
Products: NA
Alternate protein names: Organic Radical Activating Family Protein; Radical SAM Domain Protein; Radical SAM Domain-Containing Protein
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MDTWASAGGETTVDAVLAQVRNWLSGATGITISGGEPFDQPDALIHLLQGLRKLSACDILVYSGHPIESLADTLTRADGL IDVLISDAFDIDAPQTRPLRGSDNQRLHCLTALGRAGFSHYESMSKKPGKALDVMFDEDGSVWFAGIPDRDDFQRLRDLL IDQGHQVRISADKAKNK
Sequences:
>Translated_177_residues MDTWASAGGETTVDAVLAQVRNWLSGATGITISGGEPFDQPDALIHLLQGLRKLSACDILVYSGHPIESLADTLTRADGL IDVLISDAFDIDAPQTRPLRGSDNQRLHCLTALGRAGFSHYESMSKKPGKALDVMFDEDGSVWFAGIPDRDDFQRLRDLL IDQGHQVRISADKAKNK >Mature_177_residues MDTWASAGGETTVDAVLAQVRNWLSGATGITISGGEPFDQPDALIHLLQGLRKLSACDILVYSGHPIESLADTLTRADGL IDVLISDAFDIDAPQTRPLRGSDNQRLHCLTALGRAGFSHYESMSKKPGKALDVMFDEDGSVWFAGIPDRDDFQRLRDLL IDQGHQVRISADKAKNK
Specific function: Unknown
COG id: COG0602
COG function: function code O; Organic radical activating enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19261; Mature: 19261
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTWASAGGETTVDAVLAQVRNWLSGATGITISGGEPFDQPDALIHLLQGLRKLSACDIL CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCEEE VYSGHPIESLADTLTRADGLIDVLISDAFDIDAPQTRPLRGSDNQRLHCLTALGRAGFSH EECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH YESMSKKPGKALDVMFDEDGSVWFAGIPDRDDFQRLRDLLIDQGHQVRISADKAKNK HHHHHCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCC >Mature Secondary Structure MDTWASAGGETTVDAVLAQVRNWLSGATGITISGGEPFDQPDALIHLLQGLRKLSACDIL CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCEEE VYSGHPIESLADTLTRADGLIDVLISDAFDIDAPQTRPLRGSDNQRLHCLTALGRAGFSH EECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH YESMSKKPGKALDVMFDEDGSVWFAGIPDRDDFQRLRDLLIDQGHQVRISADKAKNK HHHHHCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA