| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107022941
Identifier: 107022941
GI number: 107022941
Start: 1528266
End: 1529129
Strand: Reverse
Name: 107022941
Synonym: Bcen_1389
Alternate gene names: NA
Gene position: 1529129-1528266 (Counterclockwise)
Preceding gene: 107022942
Following gene: 107022940
Centisome position: 46.41
GC content: 74.07
Gene sequence:
>864_bases ATGCAACGACGATATCCCGGACGGCATGGCGAGCGTGGCGGCTCGCCCGACTGGCACGAGCGCGACGAACGCGCGTACCG GGGCGCCGGCGAGCGCGGCATCCCGGACGACCCGGCACGGTGGCCGGAAGAAGACTACGAATCGGCTTACCGCCGATTCG CGAGCGAGGACACGGGCCCCGAAGACTGGGGCAGCGAATGGACGGAGCGCGCGGCGCGGCCGGCCGACCAGCGGCGCGGT GCCGGCGACGCGGACTGGTCGGGTGGCGCGCGCGAGCCGGCGCGGGGCGCCGAGCGCGGCTACGGTGACCCGGGCCGCCG CGCGCAGGGCCACGAAGGGCGGTACGGCGGCGAGCGCCCGGAATACCGTGGCCATCACCGGATGGGCTGGTACGGCAGCG AGCGCGACATAGGCGACCCCCGAGGCGACCCGCGCTACGGCGGCAGCGCCCCCGACCTGTCGCGCTTCGGCAGGGACACC GAACGCGACGCGCTGCGCCATCGCCGCGGTCCGAAAGGCTATACGCGCTCGGACGAGCGGATTCGCGAGGACGTCTGCGA GCGGCTCGCGCATGCGCTCGAGATCGACGTGAGCGACGTCACCGTGCAGGTGAAGGCGGGGCGCGTCGAACTGGAGGGCA CGGTGCCGGCGCGCTGGATGAAGCACGACATCGAGGATCTGGCCGACGGTTGCCTGGGCGTGCAGGACGTCGAGAATCGC GTGCGCGTGCGCCGTGACGGCGAACACGATGCCGGCATGGTGCTGCATCCGGATCAGCGGACCGTCACGCCCACCCAGCC GGCCGCGCGCGACCCCGAGCCCGGCACCGTCGTGGGCGGCCGCGAGCGCGAACCGCGCCACTGA
Upstream 100 bases:
>100_bases CCGGCAACGGCGCCGGCACGCGATTTGCATTCACCCGACCGACGCGCGCCGCGACGCGGCATCGGACCGTGCGCGGCGCG GGCGATCAAGGAGAGACACG
Downstream 100 bases:
>100_bases CCGCCCGTGCGTGAAACGGCCCGCCCCCGACCGCGAGCAATGCGTGCATGACGACCGGAATCGACGAAACGCCCATCAAG GATCGTGAGGCGGCAGCCGG
Product: transport-associated
Products: NA
Alternate protein names: Periplasmic Or Secreted Lipoprotein; Osmotic Sensory Protein; Osmotically Inducible Sensory Protein; Osmotically Inducible Protein Y; Pe_pgrs
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MQRRYPGRHGERGGSPDWHERDERAYRGAGERGIPDDPARWPEEDYESAYRRFASEDTGPEDWGSEWTERAARPADQRRG AGDADWSGGAREPARGAERGYGDPGRRAQGHEGRYGGERPEYRGHHRMGWYGSERDIGDPRGDPRYGGSAPDLSRFGRDT ERDALRHRRGPKGYTRSDERIREDVCERLAHALEIDVSDVTVQVKAGRVELEGTVPARWMKHDIEDLADGCLGVQDVENR VRVRRDGEHDAGMVLHPDQRTVTPTQPAARDPEPGTVVGGREREPRH
Sequences:
>Translated_287_residues MQRRYPGRHGERGGSPDWHERDERAYRGAGERGIPDDPARWPEEDYESAYRRFASEDTGPEDWGSEWTERAARPADQRRG AGDADWSGGAREPARGAERGYGDPGRRAQGHEGRYGGERPEYRGHHRMGWYGSERDIGDPRGDPRYGGSAPDLSRFGRDT ERDALRHRRGPKGYTRSDERIREDVCERLAHALEIDVSDVTVQVKAGRVELEGTVPARWMKHDIEDLADGCLGVQDVENR VRVRRDGEHDAGMVLHPDQRTVTPTQPAARDPEPGTVVGGREREPRH >Mature_287_residues MQRRYPGRHGERGGSPDWHERDERAYRGAGERGIPDDPARWPEEDYESAYRRFASEDTGPEDWGSEWTERAARPADQRRG AGDADWSGGAREPARGAERGYGDPGRRAQGHEGRYGGERPEYRGHHRMGWYGSERDIGDPRGDPRYGGSAPDLSRFGRDT ERDALRHRRGPKGYTRSDERIREDVCERLAHALEIDVSDVTVQVKAGRVELEGTVPARWMKHDIEDLADGCLGVQDVENR VRVRRDGEHDAGMVLHPDQRTVTPTQPAARDPEPGTVVGGREREPRH
Specific function: Unknown
COG id: COG2823
COG function: function code R; Predicted periplasmic or secreted lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32458; Mature: 32458
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS50914 BON
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRYPGRHGERGGSPDWHERDERAYRGAGERGIPDDPARWPEEDYESAYRRFASEDTGP CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC EDWGSEWTERAARPADQRRGAGDADWSGGAREPARGAERGYGDPGRRAQGHEGRYGGERP HHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC EYRGHHRMGWYGSERDIGDPRGDPRYGGSAPDLSRFGRDTERDALRHRRGPKGYTRSDER CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCHHH IREDVCERLAHALEIDVSDVTVQVKAGRVELEGTVPARWMKHDIEDLADGCLGVQDVENR HHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHH VRVRRDGEHDAGMVLHPDQRTVTPTQPAARDPEPGTVVGGREREPRH HHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC >Mature Secondary Structure MQRRYPGRHGERGGSPDWHERDERAYRGAGERGIPDDPARWPEEDYESAYRRFASEDTGP CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC EDWGSEWTERAARPADQRRGAGDADWSGGAREPARGAERGYGDPGRRAQGHEGRYGGERP HHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC EYRGHHRMGWYGSERDIGDPRGDPRYGGSAPDLSRFGRDTERDALRHRRGPKGYTRSDER CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCHHH IREDVCERLAHALEIDVSDVTVQVKAGRVELEGTVPARWMKHDIEDLADGCLGVQDVENR HHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHH VRVRRDGEHDAGMVLHPDQRTVTPTQPAARDPEPGTVVGGREREPRH HHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA