| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107022906
Identifier: 107022906
GI number: 107022906
Start: 1495131
End: 1495442
Strand: Reverse
Name: 107022906
Synonym: Bcen_1354
Alternate gene names: NA
Gene position: 1495442-1495131 (Counterclockwise)
Preceding gene: 107022907
Following gene: 107022905
Centisome position: 45.39
GC content: 67.95
Gene sequence:
>312_bases ATGAGTATCCGCGTGAAACCCGGCATGCTGCGCGACATCGCCGAGACGCTCGGCCGTCATTTCGAGGCGCGCGCGATGCC GTTCCACGTCGAGGAGCAGCCGGCCGGCGCATTGCATATCGGCTTTCGCGTCGACGGCCATCCGGCGTCGCTGACCGTGA CGTTCGACGCCGACGCCTTCGCCGCGCTCGAACGGGCCGACCTCAGCCGGCAACGCGGCACGCTCACGCGCGTCGCGGCC GAATTCGACACGATGATGGCGCGCCGCGCACCGACCGCGTATGCGGGCGATTTCCATTTCAACCGGCTTTGA
Upstream 100 bases:
>100_bases CCGGACATGCGCCGCCCGAACGCGACCCGCCGTCGCGCGAGCCGCCCGTGCGGGCGTGGCGGGCGGGCGCGACGCCGCTC ATGCGAATGGAGGATCTGCG
Downstream 100 bases:
>100_bases GCCGCGCCGCACTGGCCGGCCGCAGCCGCCGATTCAGGGAGGACTCGATGAACACGATCCAGACGATACGCGTGGGCGCC TGTGCGTTCGCCGCGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MSIRVKPGMLRDIAETLGRHFEARAMPFHVEEQPAGALHIGFRVDGHPASLTVTFDADAFAALERADLSRQRGTLTRVAA EFDTMMARRAPTAYAGDFHFNRL
Sequences:
>Translated_103_residues MSIRVKPGMLRDIAETLGRHFEARAMPFHVEEQPAGALHIGFRVDGHPASLTVTFDADAFAALERADLSRQRGTLTRVAA EFDTMMARRAPTAYAGDFHFNRL >Mature_102_residues SIRVKPGMLRDIAETLGRHFEARAMPFHVEEQPAGALHIGFRVDGHPASLTVTFDADAFAALERADLSRQRGTLTRVAAE FDTMMARRAPTAYAGDFHFNRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11456; Mature: 11325
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRVKPGMLRDIAETLGRHFEARAMPFHVEEQPAGALHIGFRVDGHPASLTVTFDADAF CEEECCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEEEECCCCCEEEEEECCHHH AALERADLSRQRGTLTRVAAEFDTMMARRAPTAYAGDFHFNRL HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEECCEEECCC >Mature Secondary Structure SIRVKPGMLRDIAETLGRHFEARAMPFHVEEQPAGALHIGFRVDGHPASLTVTFDADAF EEECCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEEEECCCCCEEEEEECCHHH AALERADLSRQRGTLTRVAAEFDTMMARRAPTAYAGDFHFNRL HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEECCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA