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The map label for this gene is ybbO [C]

Identifier: 107022805

GI number: 107022805

Start: 1379768

End: 1380733

Strand: Reverse

Name: ybbO [C]

Synonym: Bcen_1253

Alternate gene names: 107022805

Gene position: 1380733-1379768 (Counterclockwise)

Preceding gene: 107022807

Following gene: 107022802

Centisome position: 41.91

GC content: 70.19

Gene sequence:

>966_bases
ATGACGAGCAGGCAGCATCCCCTTCATTCCGGATTCGACGCCGCCTCGACGGCGAGCGACGTCCTGGCCGGCCTCGATCT
GCACGGCAAGACCGCCATCGTCACGGGCGGCCATTCGGGTCTCGGCCTCGAAACCACGCGGGCACTGGCGCAGGCCGGTG
CGCACGTCGTCGTCGGCGCACGGAGCGCCGCGGCCGCGCGCGAAGCGACGCGCGGCATCGCGGGCGTGGAGGTCGCGCCG
CTCGAACTCGCGGACGCCGCGAGCGTGGCCGCATTCGCCGCGCGGTTCGTCGATGCGGGACGCCACGTGCATATCGTCAT
CAACAGCGCGGGCATCATGGCGTGCCCGGAGACTCGCTTGGGCGACGGTCGGGAAGCGCAGTTGGCCGTCAATCACCTCG
GTCACTACGCGCTCGTCAACCGGCTGTGGCCCGTGCTCGCGCATGGCGACGGCGCCCGCGTGGTGGCGGTGTCGTCGCTC
GGGCACCGGCTGTCGCCGATTCGCTGGGACGATATCGATTTCGCGCGCGGTTACGACAAATGGCTCGCGTACGGGCAGTC
GAAAACCGCCAATGCGTTGTTCGCGGTGCAGCTCGACATGCTCGGCGCGCCGTTCGGCGTCCGCGCGTATTCGCTGCATC
CGGGCAAGATCGCGACGCCGCTGCAGCGTCATTTGACGCGCGAGGAAATGATGGCGCAGGGCTGGGTCGACGAACACGGC
GTGCCGATCGATCCGACGTTCAAGACGCCCGCGCAGGGAGCGGCAACGCAGGTATGGGCGGCGACGTCGCCGCGCCTGGC
CGATCTCGGCGGTGTCTATTGCGAGGATTGCGATGTTGCGGCGGTGACCCGCGGCAACGAGGAATCGGGCGTGCGCCCGC
ACGCGATCGATCCGGAGGAGGCGGCGCGGCTGTGGGCGTGGTCCGCGGCAGCGACGGGCGTCGATGCCTTTGCGGCGCGG
GGCTGA

Upstream 100 bases:

>100_bases
ATTGCATTCACAGTCCGGATGCGCGGCCGGAGAATGTGCTCGTGCAGTGACGCGGCCGACGGGCGGCCGCGTGCTTCGCG
TACCGTTCCTGGAGCCTTCG

Downstream 100 bases:

>100_bases
CGCCCAGGCATTTGCCAGGCCGGGCGCCGCGCGGGTATCGGCGGCGGTTCGATACTCGCGCGCGGCAAGCTATCCGCGCG
CTTGCCGCAGCGCGCGCCCC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MTSRQHPLHSGFDAASTASDVLAGLDLHGKTAIVTGGHSGLGLETTRALAQAGAHVVVGARSAAAAREATRGIAGVEVAP
LELADAASVAAFAARFVDAGRHVHIVINSAGIMACPETRLGDGREAQLAVNHLGHYALVNRLWPVLAHGDGARVVAVSSL
GHRLSPIRWDDIDFARGYDKWLAYGQSKTANALFAVQLDMLGAPFGVRAYSLHPGKIATPLQRHLTREEMMAQGWVDEHG
VPIDPTFKTPAQGAATQVWAATSPRLADLGGVYCEDCDVAAVTRGNEESGVRPHAIDPEEAARLWAWSAAATGVDAFAAR
G

Sequences:

>Translated_321_residues
MTSRQHPLHSGFDAASTASDVLAGLDLHGKTAIVTGGHSGLGLETTRALAQAGAHVVVGARSAAAAREATRGIAGVEVAP
LELADAASVAAFAARFVDAGRHVHIVINSAGIMACPETRLGDGREAQLAVNHLGHYALVNRLWPVLAHGDGARVVAVSSL
GHRLSPIRWDDIDFARGYDKWLAYGQSKTANALFAVQLDMLGAPFGVRAYSLHPGKIATPLQRHLTREEMMAQGWVDEHG
VPIDPTFKTPAQGAATQVWAATSPRLADLGGVYCEDCDVAAVTRGNEESGVRPHAIDPEEAARLWAWSAAATGVDAFAAR
G
>Mature_320_residues
TSRQHPLHSGFDAASTASDVLAGLDLHGKTAIVTGGHSGLGLETTRALAQAGAHVVVGARSAAAAREATRGIAGVEVAPL
ELADAASVAAFAARFVDAGRHVHIVINSAGIMACPETRLGDGREAQLAVNHLGHYALVNRLWPVLAHGDGARVVAVSSLG
HRLSPIRWDDIDFARGYDKWLAYGQSKTANALFAVQLDMLGAPFGVRAYSLHPGKIATPLQRHLTREEMMAQGWVDEHGV
PIDPTFKTPAQGAATQVWAATSPRLADLGGVYCEDCDVAAVTRGNEESGVRPHAIDPEEAARLWAWSAAATGVDAFAARG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7706523, Length=322, Percent_Identity=35.4037267080745, Blast_Score=158, Evalue=6e-39,
Organism=Homo sapiens, GI166795268, Length=296, Percent_Identity=35.8108108108108, Blast_Score=156, Evalue=2e-38,
Organism=Homo sapiens, GI186928839, Length=297, Percent_Identity=34.6801346801347, Blast_Score=155, Evalue=5e-38,
Organism=Homo sapiens, GI10190746, Length=312, Percent_Identity=33.0128205128205, Blast_Score=151, Evalue=6e-37,
Organism=Homo sapiens, GI225579078, Length=308, Percent_Identity=34.0909090909091, Blast_Score=138, Evalue=7e-33,
Organism=Homo sapiens, GI193804850, Length=301, Percent_Identity=32.5581395348837, Blast_Score=129, Evalue=3e-30,
Organism=Homo sapiens, GI19923931, Length=250, Percent_Identity=34.8, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI146231950, Length=299, Percent_Identity=33.4448160535117, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI193207620, Length=318, Percent_Identity=30.5031446540881, Blast_Score=125, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17532805, Length=282, Percent_Identity=30.4964539007092, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17532791, Length=285, Percent_Identity=28.7719298245614, Blast_Score=116, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71992402, Length=281, Percent_Identity=29.8932384341637, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17558006, Length=305, Percent_Identity=29.8360655737705, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17535059, Length=282, Percent_Identity=28.7234042553192, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17505416, Length=217, Percent_Identity=29.0322580645161, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI32565532, Length=228, Percent_Identity=28.5087719298246, Blast_Score=84, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6324820, Length=326, Percent_Identity=25.7668711656442, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI22024069, Length=303, Percent_Identity=35.6435643564356, Blast_Score=158, Evalue=4e-39,
Organism=Drosophila melanogaster, GI24586328, Length=296, Percent_Identity=35.1351351351351, Blast_Score=156, Evalue=2e-38,
Organism=Drosophila melanogaster, GI28573296, Length=295, Percent_Identity=35.9322033898305, Blast_Score=153, Evalue=1e-37,
Organism=Drosophila melanogaster, GI19921754, Length=298, Percent_Identity=35.2348993288591, Blast_Score=149, Evalue=3e-36,
Organism=Drosophila melanogaster, GI45554248, Length=261, Percent_Identity=36.7816091954023, Blast_Score=141, Evalue=8e-34,
Organism=Drosophila melanogaster, GI24640117, Length=261, Percent_Identity=36.7816091954023, Blast_Score=141, Evalue=8e-34,
Organism=Drosophila melanogaster, GI20129347, Length=281, Percent_Identity=30.9608540925267, Blast_Score=138, Evalue=4e-33,
Organism=Drosophila melanogaster, GI161076371, Length=259, Percent_Identity=36.2934362934363, Blast_Score=132, Evalue=5e-31,
Organism=Drosophila melanogaster, GI24647946, Length=304, Percent_Identity=29.9342105263158, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI45553409, Length=294, Percent_Identity=30.2721088435374, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24647948, Length=294, Percent_Identity=30.2721088435374, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24656154, Length=320, Percent_Identity=29.375, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI19922628, Length=320, Percent_Identity=29.375, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24647931, Length=286, Percent_Identity=25.5244755244755, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 33615; Mature: 33484

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRQHPLHSGFDAASTASDVLAGLDLHGKTAIVTGGHSGLGLETTRALAQAGAHVVVGA
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEC
RSAAAAREATRGIAGVEVAPLELADAASVAAFAARFVDAGRHVHIVINSAGIMACPETRL
CHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCCCC
GDGREAQLAVNHLGHYALVNRLWPVLAHGDGARVVAVSSLGHRLSPIRWDDIDFARGYDK
CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCCCCCHHHCCHHH
WLAYGQSKTANALFAVQLDMLGAPFGVRAYSLHPGKIATPLQRHLTREEMMAQGWVDEHG
HHHCCCCCCCCEEEEEEEEHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCC
VPIDPTFKTPAQGAATQVWAATSPRLADLGGVYCEDCDVAAVTRGNEESGVRPHAIDPEE
CCCCCCCCCCCCCCCEEEEECCCCCHHHCCCEEECCCCEEEEECCCCCCCCCCCCCCHHH
AARLWAWSAAATGVDAFAARG
HHHHEEHHHHHCCHHHHHCCC
>Mature Secondary Structure 
TSRQHPLHSGFDAASTASDVLAGLDLHGKTAIVTGGHSGLGLETTRALAQAGAHVVVGA
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEC
RSAAAAREATRGIAGVEVAPLELADAASVAAFAARFVDAGRHVHIVINSAGIMACPETRL
CHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCCCC
GDGREAQLAVNHLGHYALVNRLWPVLAHGDGARVVAVSSLGHRLSPIRWDDIDFARGYDK
CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCCCCCHHHCCHHH
WLAYGQSKTANALFAVQLDMLGAPFGVRAYSLHPGKIATPLQRHLTREEMMAQGWVDEHG
HHHCCCCCCCCEEEEEEEEHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCC
VPIDPTFKTPAQGAATQVWAATSPRLADLGGVYCEDCDVAAVTRGNEESGVRPHAIDPEE
CCCCCCCCCCCCCCCEEEEECCCCCHHHCCCEEECCCCEEEEECCCCCCCCCCCCCCHHH
AARLWAWSAAATGVDAFAARG
HHHHEEHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8383668 [H]