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The map label for this gene is yecS [C]

Identifier: 107022625

GI number: 107022625

Start: 1173953

End: 1174675

Strand: Reverse

Name: yecS [C]

Synonym: Bcen_1072

Alternate gene names: 107022625

Gene position: 1174675-1173953 (Counterclockwise)

Preceding gene: 107022626

Following gene: 107022618

Centisome position: 35.65

GC content: 67.5

Gene sequence:

>723_bases
TTGCGCTTTCGCGCACGCATTCGATTCGCACTCCATGTCGACAACGTCCCTGCTCGTCCAATCGCTGCCGGTGCTCGCCC
AGGGCGCCGTCCTGACCGTCAAGTTCGCCGTGCTGTCGATGGTGTTCGGCCTGCTTGGCGCCGTCGTGCTCGCGATGATG
GGCATCCGGCAGAGCGAAGCGCTCGACGGCTGCGCATCTGGGTCAACGCGCTCGCGTGGCTGGCACGCGCGTACGTGAGC
CTGATGCGCGGCACGCCGCTGCTCGTGCAGATCTTCGTCATCTATTACGGGCTGCCGAGCCTCGGCATCTCGCTCGATCC
GACGCCGGCCGGCGTCATCGCGCTGTCCGCGAACGTCGCGGCCTACATGTCGGAAAGCATGCGCGGCGCGATCAACGGGA
TCGCGCGCGGCCAGTGGCTCGCCGCGTACAGCCTCGGGCTGTCGTGGGGGCAGACGCTGCGCTACGTGATCGGCCCGCAG
GCGCTGCGCATCGCGGTGCCGAGCCTGTCGAACAGCCTGATCAGCCTGATCAAGGACACGTCGCTCGTGTCCGTGATCAC
CGTGACCGAACTGCTGCGCAGCGCGCAGGAAGTGATCGCGGCGACCTATCAGCCGCTGCCGCTCTATCTCGCCGCCGCGG
CCGTGTACTGGGTCCTGTGCCAGATCCTCGAATGGGGGCAGCGCTGGTACGAAAAGCGCCTGTCGCTGCCGTCGCGGCAC
TGA

Upstream 100 bases:

>100_bases
CCGATCAAGTAAGCACGCCTGCATTTCCCGCCTGACGGCGGGCCGGAAAGGGCGGCATCCGCAACGATGCCGCCCTTTGT
TTTATCGGCCCGGTTTATGA

Downstream 100 bases:

>100_bases
GCCGCGCCGTTGCGCCGGGCCGCGGTCCCGGCGCCCGCCTTCCCGCCTGTTCCGTCTATTCGCCCGAATAACGCACACCG
AGCACGGCGCGCGCCGCATC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MRFRARIRFALHVDNVPARPIAAGARPGRRPDRQVRRAVDGVRPAWRRRARDDGHPAERSARRLRIWVNALAWLARAYVS
LMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQ
ALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEVIAATYQPLPLYLAAAAVYWVLCQILEWGQRWYEKRLSLPSRH

Sequences:

>Translated_240_residues
MRFRARIRFALHVDNVPARPIAAGARPGRRPDRQVRRAVDGVRPAWRRRARDDGHPAERSARRLRIWVNALAWLARAYVS
LMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQ
ALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEVIAATYQPLPLYLAAAAVYWVLCQILEWGQRWYEKRLSLPSRH
>Mature_240_residues
MRFRARIRFALHVDNVPARPIAAGARPGRRPDRQVRRAVDGVRPAWRRRARDDGHPAERSARRLRIWVNALAWLARAYVS
LMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQ
ALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEVIAATYQPLPLYLAAAAVYWVLCQILEWGQRWYEKRLSLPSRH

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=168, Percent_Identity=50.5952380952381, Blast_Score=174, Evalue=5e-45,
Organism=Escherichia coli, GI1787030, Length=165, Percent_Identity=40, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1787086, Length=174, Percent_Identity=36.7816091954023, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787087, Length=173, Percent_Identity=33.5260115606936, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1788645, Length=169, Percent_Identity=36.6863905325444, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI87082239, Length=171, Percent_Identity=33.9181286549708, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1788646, Length=175, Percent_Identity=28.5714285714286, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1786873, Length=158, Percent_Identity=34.1772151898734, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1786874, Length=182, Percent_Identity=28.021978021978, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI48994930, Length=171, Percent_Identity=30.9941520467836, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 26776; Mature: 26776

Theoretical pI: Translated: 11.84; Mature: 11.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFRARIRFALHVDNVPARPIAAGARPGRRPDRQVRRAVDGVRPAWRRRARDDGHPAERS
CCCHHEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHH
ARRLRIWVNALAWLARAYVSLMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHH
AYMSESMRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDT
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHEEECCHHHHHHHHHHHHH
SLVSVITVTELLRSAQEVIAATYQPLPLYLAAAAVYWVLCQILEWGQRWYEKRLSLPSRH
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRFRARIRFALHVDNVPARPIAAGARPGRRPDRQVRRAVDGVRPAWRRRARDDGHPAERS
CCCHHEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHH
ARRLRIWVNALAWLARAYVSLMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHH
AYMSESMRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDT
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHEEECCHHHHHHHHHHHHH
SLVSVITVTELLRSAQEVIAATYQPLPLYLAAAAVYWVLCQILEWGQRWYEKRLSLPSRH
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]