| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107022530
Identifier: 107022530
GI number: 107022530
Start: 1066681
End: 1066998
Strand: Reverse
Name: 107022530
Synonym: Bcen_0975
Alternate gene names: NA
Gene position: 1066998-1066681 (Counterclockwise)
Preceding gene: 107022534
Following gene: 107022528
Centisome position: 32.39
GC content: 63.52
Gene sequence:
>318_bases ATGGCGCATACGCATACGGAGCAATTCGCCAGCTTCGCTGACTTCTACCCGTATTACCTGAACGAGCACCAGAACCTGAC GTCGCGGCGACTGCACTTCATCGGCTCGCTCGGCGTGATCGGCTGCGTCGCGATGGCGGTCGCGACCGGCCACTGGCTGT GGCTGCCGGCGGCGGTCGTCTGCGGCTACGGGTTCGCGTGGGTCGGACACTTCTTCTTCGAGAAGAACCGCCCGGCCACG TTCCGGCACCCGATCTACAGCCTGATGGGCGACTGGGTGATGTTCAAGGACATCTGCACCGGCAAGATCCCGCTGTAG
Upstream 100 bases:
>100_bases AAAAGGAAAGCACGGGCCGGCGCGGCGGCCCGCCACCGCTTGCGGACACGGGCCGCCGGCCGCACAATGGCCCCATGAAC AGCGGCCCGAGGAGACGGCC
Downstream 100 bases:
>100_bases CCGCCGGCCCCGCCTTCAGGCAGGCCGCGGCGGCTGCGCGTGCGCGTCGGCGACGCCCGGCGCCGGTGCGGCGCTGCCGG CCGGCTGCCCGCCCGCGAGC
Product: membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MAHTHTEQFASFADFYPYYLNEHQNLTSRRLHFIGSLGVIGCVAMAVATGHWLWLPAAVVCGYGFAWVGHFFFEKNRPAT FRHPIYSLMGDWVMFKDICTGKIPL
Sequences:
>Translated_105_residues MAHTHTEQFASFADFYPYYLNEHQNLTSRRLHFIGSLGVIGCVAMAVATGHWLWLPAAVVCGYGFAWVGHFFFEKNRPAT FRHPIYSLMGDWVMFKDICTGKIPL >Mature_104_residues AHTHTEQFASFADFYPYYLNEHQNLTSRRLHFIGSLGVIGCVAMAVATGHWLWLPAAVVCGYGFAWVGHFFFEKNRPATF RHPIYSLMGDWVMFKDICTGKIPL
Specific function: Unknown
COG id: COG4323
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12015; Mature: 11884
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHTHTEQFASFADFYPYYLNEHQNLTSRRLHFIGSLGVIGCVAMAVATGHWLWLPAAVV CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH CGYGFAWVGHFFFEKNRPATFRHPIYSLMGDWVMFKDICTGKIPL HCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AHTHTEQFASFADFYPYYLNEHQNLTSRRLHFIGSLGVIGCVAMAVATGHWLWLPAAVV CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH CGYGFAWVGHFFFEKNRPATFRHPIYSLMGDWVMFKDICTGKIPL HCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA