| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is fusA [H]
Identifier: 107022522
GI number: 107022522
Start: 1058881
End: 1060458
Strand: Reverse
Name: fusA [H]
Synonym: Bcen_0967
Alternate gene names: 107022522
Gene position: 1060458-1058881 (Counterclockwise)
Preceding gene: 107022524
Following gene: 107022521
Centisome position: 32.19
GC content: 71.74
Gene sequence:
>1578_bases GTGCAGTCTCCGGCGACAAAAGGGACGCTCGCACTGGCGGTTCTTGCAGTCTCATTAATAATGGCCGGTTGCGCGAGCAT GGGCGACAACAAAACCCAGTCCACTCGCATCGAAGCGAACGCACTCGACGCCGGCGCGGCCATCCGCGCGGCCGACCGCG ACGCGGGCTGGCCCGCCGCCGACTGGTGGCGCGCGTACCGCGATCCCCAGCTCGATGCATGGATCGCCGCCGCCCAGGCC GGCAACCCGACCCTCGCGGCCGCCGAGGCCCGCGTGCGCGAAGCGCAGGCGATGGCGCGCGTCGCCCGCTCGGCCGAACT GCCGCAGATCAACGGCAACCTGTCGCTGATGCGCCAGCACTGGCCGGACAACGTGTACTACGGCCCGGGGCCGCTCGCGA ACGCCGATACCTGGAACAATACCGGCTCGCTCGGCCTGTCGTACCACCTCGATCTGTGGGGCAAGGACAAGAACGCGACC GAGCGGGCGCTCGACACCGCGCATGCGACCGCCGCCGACGCGCGCGCGGCGAAGCTCGAACTCGAAGTCAACGTGGTGCG CGCGTATGTCGGCATGTCGATGAACTACGCGCTGCTGGACCTCGCGCACGAGACGTTCGAACGCCAGCGCTCGCTCGCCG ATCTCGCGCGCAAGCGGCTGCAGGCCGGCCTCGGCACGCAGCTCGACGTGAGCCAGGCGGAATCGACGCTGCCCGACTAC GAGCGCCAGATCGACAGCTACGAAGAGGCGATCCAGCTCGCGCGCCACCAGCTCGCCGCACTGGCCGGCAAGGGCCCGGG CGCCGGCGACACCATCAAGCGGCCGCAGCTTGCGCTCGATGCGCCGGCCGGCCTGCCGTCGGCGATGCCGGCCGACCTGC TCGGCCGCCGCCCCGACGTCGTCGCGGCGCGCTGGACGGTCGACGCGCAGGCGCGCGGCATCGACGTCGCGAAGGCGTCG TTCTACCCGAACATCGACCTGCTCGCGACGGTCGGCGGCTTCGGCGTGACCGCGCCGTTCACCGACTTCCTGCGCGCGAT GAACGGCGGCTGGACGGCCGGCCCCGCGCTGTCGCTGCCGATCTTCGAAGGCGGCCGGCTGCGGGCGCAGCTCGGCGCCG CGAACGCCGGCTACGACCAGGCGGTCGAGCGCTACAACCAGACGATCGTCGGTGCGCTCAAGGACATCGCCGACCAGGTC GTGCGAATCCGCTCGCTCGATACGCAGAAGAAGGACGCCGCGCGCTCGGTGGCGGCCAACAATCGCAGCTATCAACTGTC GCGCGAAGGCTTCCGCCGCGGGCTGACCGATTACGTGAACGTGCTGGTCGCGCAGCAGCAACTGCTGCGCGCGCAGGAGA CGGCCGCCCGCATCGACGCCGAACGCCTCGCCGCGCACGCGCAGCTGATGGCCGCGCTCGGAGGTGGGGTCGAGACGGGT ACCGATGTGCCAAAGGACGAAGCCGCCACCGCGGTTGCCGCGCCCGCCGCCGCGTCGGGCACGAAGCCCGCGGCAGCCGT CGCCCGGCCCGCGGAAGTCGCCACCACCGGCGCGTCCGGCGTGCCGGCCGCACGGTAA
Upstream 100 bases:
>100_bases CAGGATTCGTAAAAATGACTTGCACCGTTGTCCGTTTATTCAGGAATCACTGAAAAATATAATCGCCTCCGACTCATCTA TATCCGAAAGGGAGAAAATC
Downstream 100 bases:
>100_bases CGCGGAGCGTCGCCATGTCAGTCTCCTCCCCCGCTTCAACGCCCGCCGGCGGCCCGTTCGCGGCCTCGTATGCCGCATTC GGCGACTGGGCCCGCACCGA
Product: RND efflux system, outer membrane lipoprotein, NodT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 525; Mature: 525
Protein sequence:
>525_residues MQSPATKGTLALAVLAVSLIMAGCASMGDNKTQSTRIEANALDAGAAIRAADRDAGWPAADWWRAYRDPQLDAWIAAAQA GNPTLAAAEARVREAQAMARVARSAELPQINGNLSLMRQHWPDNVYYGPGPLANADTWNNTGSLGLSYHLDLWGKDKNAT ERALDTAHATAADARAAKLELEVNVVRAYVGMSMNYALLDLAHETFERQRSLADLARKRLQAGLGTQLDVSQAESTLPDY ERQIDSYEEAIQLARHQLAALAGKGPGAGDTIKRPQLALDAPAGLPSAMPADLLGRRPDVVAARWTVDAQARGIDVAKAS FYPNIDLLATVGGFGVTAPFTDFLRAMNGGWTAGPALSLPIFEGGRLRAQLGAANAGYDQAVERYNQTIVGALKDIADQV VRIRSLDTQKKDAARSVAANNRSYQLSREGFRRGLTDYVNVLVAQQQLLRAQETAARIDAERLAAHAQLMAALGGGVETG TDVPKDEAATAVAAPAAASGTKPAAAVARPAEVATTGASGVPAAR
Sequences:
>Translated_525_residues MQSPATKGTLALAVLAVSLIMAGCASMGDNKTQSTRIEANALDAGAAIRAADRDAGWPAADWWRAYRDPQLDAWIAAAQA GNPTLAAAEARVREAQAMARVARSAELPQINGNLSLMRQHWPDNVYYGPGPLANADTWNNTGSLGLSYHLDLWGKDKNAT ERALDTAHATAADARAAKLELEVNVVRAYVGMSMNYALLDLAHETFERQRSLADLARKRLQAGLGTQLDVSQAESTLPDY ERQIDSYEEAIQLARHQLAALAGKGPGAGDTIKRPQLALDAPAGLPSAMPADLLGRRPDVVAARWTVDAQARGIDVAKAS FYPNIDLLATVGGFGVTAPFTDFLRAMNGGWTAGPALSLPIFEGGRLRAQLGAANAGYDQAVERYNQTIVGALKDIADQV VRIRSLDTQKKDAARSVAANNRSYQLSREGFRRGLTDYVNVLVAQQQLLRAQETAARIDAERLAAHAQLMAALGGGVETG TDVPKDEAATAVAAPAAASGTKPAAAVARPAEVATTGASGVPAAR >Mature_525_residues MQSPATKGTLALAVLAVSLIMAGCASMGDNKTQSTRIEANALDAGAAIRAADRDAGWPAADWWRAYRDPQLDAWIAAAQA GNPTLAAAEARVREAQAMARVARSAELPQINGNLSLMRQHWPDNVYYGPGPLANADTWNNTGSLGLSYHLDLWGKDKNAT ERALDTAHATAADARAAKLELEVNVVRAYVGMSMNYALLDLAHETFERQRSLADLARKRLQAGLGTQLDVSQAESTLPDY ERQIDSYEEAIQLARHQLAALAGKGPGAGDTIKRPQLALDAPAGLPSAMPADLLGRRPDVVAARWTVDAQARGIDVAKAS FYPNIDLLATVGGFGVTAPFTDFLRAMNGGWTAGPALSLPIFEGGRLRAQLGAANAGYDQAVERYNQTIVGALKDIADQV VRIRSLDTQKKDAARSVAANNRSYQLSREGFRRGLTDYVNVLVAQQQLLRAQETAARIDAERLAAHAQLMAALGGGVETG TDVPKDEAATAVAAPAAASGTKPAAAVARPAEVATTGASGVPAAR
Specific function: Involved in the resistance (detoxification) of the fungal toxin fusaric acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI2367348, Length=483, Percent_Identity=28.9855072463768, Blast_Score=195, Evalue=6e-51, Organism=Escherichia coli, GI1786785, Length=470, Percent_Identity=28.936170212766, Blast_Score=149, Evalue=6e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 - InterPro: IPR010131 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 55371; Mature: 55371
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSPATKGTLALAVLAVSLIMAGCASMGDNKTQSTRIEANALDAGAAIRAADRDAGWPAA CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEECCCCCCCCHH DWWRAYRDPQLDAWIAAAQAGNPTLAAAEARVREAQAMARVARSAELPQINGNLSLMRQH HHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHC WPDNVYYGPGPLANADTWNNTGSLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLE CCCCCEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEE LEVNVVRAYVGMSMNYALLDLAHETFERQRSLADLARKRLQAGLGTQLDVSQAESTLPDY EHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHH ERQIDSYEEAIQLARHQLAALAGKGPGAGDTIKRPQLALDAPAGLPSAMPADLLGRRPDV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCE VAARWTVDAQARGIDVAKASFYPNIDLLATVGGFGVTAPFTDFLRAMNGGWTAGPALSLP EEEEEEECCCCCCCEEEHHHCCCCCHHEEECCCCCCCCCHHHHHHHHCCCCCCCCEEECC IFEGGRLRAQLGAANAGYDQAVERYNQTIVGALKDIADQVVRIRSLDTQKKDAARSVAAN CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC NRSYQLSREGFRRGLTDYVNVLVAQQQLLRAQETAARIDAERLAAHAQLMAALGGGVETG CCCEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TDVPKDEAATAVAAPAAASGTKPAAAVARPAEVATTGASGVPAAR CCCCCHHHHHHHHCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCCC >Mature Secondary Structure MQSPATKGTLALAVLAVSLIMAGCASMGDNKTQSTRIEANALDAGAAIRAADRDAGWPAA CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEECCCCCCCCHH DWWRAYRDPQLDAWIAAAQAGNPTLAAAEARVREAQAMARVARSAELPQINGNLSLMRQH HHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHC WPDNVYYGPGPLANADTWNNTGSLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLE CCCCCEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEE LEVNVVRAYVGMSMNYALLDLAHETFERQRSLADLARKRLQAGLGTQLDVSQAESTLPDY EHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHH ERQIDSYEEAIQLARHQLAALAGKGPGAGDTIKRPQLALDAPAGLPSAMPADLLGRRPDV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCE VAARWTVDAQARGIDVAKASFYPNIDLLATVGGFGVTAPFTDFLRAMNGGWTAGPALSLP EEEEEEECCCCCCCEEEHHHCCCCCHHEEECCCCCCCCCHHHHHHHHCCCCCCCCEEECC IFEGGRLRAQLGAANAGYDQAVERYNQTIVGALKDIADQVVRIRSLDTQKKDAARSVAAN CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC NRSYQLSREGFRRGLTDYVNVLVAQQQLLRAQETAARIDAERLAAHAQLMAALGGGVETG CCCEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TDVPKDEAATAVAAPAAASGTKPAAAVARPAEVATTGASGVPAAR CCCCCHHHHHHHHCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1370369 [H]