Definition Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Accession NC_008060
Length 3,294,563

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The map label for this gene is iagB [H]

Identifier: 107022428

GI number: 107022428

Start: 948473

End: 950272

Strand: Reverse

Name: iagB [H]

Synonym: Bcen_0873

Alternate gene names: 107022428

Gene position: 950272-948473 (Counterclockwise)

Preceding gene: 107022430

Following gene: 107022426

Centisome position: 28.84

GC content: 68.83

Gene sequence:

>1800_bases
ATGCCGCGTCATACCACTCGCCTGTTCGGCCGCCACTCGCTGCCCTTCGCCTCGACGATCGCGCTCGCGTGCGCGCTCTG
CGGCGTCGCGCGGGCAGATTGCCTGGACGACGCGGCCGCGTTCCAGCACGTGAGCGTCGCCCTGATGCGCGGCATCGCGC
AAGTCGAATCGGGGATGAATCCGAACGCCGTCAACACGAATACCAACGGCACGGTCGACATCGGGCTGATGCAGATCAAC
AGCACGTGGCTGCCGACGCTCGCCCGCGAAGGCATCACACGGGAAAGCCTGTTCGATGCGTGCACGAACGCGTACGTCGG
TGCGTGGATCCTGTCGCAGAACATCCGCCAGCTCGGCCCCAACTGGAACGCGATCGGCGCGTACAACTCCGCGTCGCCCG
ACAAGCGCCTCGCCTATGCGCGCAAGGTCTATGATGCAATCCGGACCATGCCGGATTCGCCGGATACTCCCATGCCCATC
CTTCCACCCTCCTTCACGCCGCCGCAACAGGCGCAGACGTACAACCCGTTCGCGAGCCTGAGCGTGTCGGCGCCGCCCGT
CACGCGCGCACGGACGATCTCGCCGGCCTCGCCGCCGGCGCCGCCGCAGGGGGGCCCCGCCGGCCCGGCCGGTACGTACA
ATTTCGGATGGACGGTCACCGGCGCCGATCAGGCCAAGCCGACCCAGGTGTTCGACGACGGTGCGCGCGTCTACGTGCAG
TTCAGCGACATGAAGCACGTGCCGGCGATCTTCACCGAGACGTCGGCCGGGCGCGTGCTGATGTCGTGGGAGCTGCAGTT
TCCCTATGCCGTCGTGACGCGTCCCGCGCAAACGTTGATCTTCCAGCTCGGGCCGTTCGAAGCGCGCGCAGCGCAGTGCG
GCGGCCGCAGGCATGACCGCGCAGGCCGGGACGGCCGGCACGGCGACGGCCGGCGCATCGGCCCCGCCATCGAGGAAGCC
GGCCGGTGCGGCAGCGAATGCCGCGACGAACACGGCAGCCAATACGGCAGCGAAACGCACCGCCTCGGCCGATGCGCTGT
GGTACGTGAATACGCCGTCCACGTCGGGAACGGCGGCGGCCTCGCCTTCGACCGCGAATATTCCTGCCACGCTGCCGACG
GCCATCACGTCGAACACGCCGCCACTCGCGCCGGCTCAAGCACCGGCCGCGGCCGCTCAGCCGTCGCGCGCCAGCGCGGA
CGCGCTGTGGTACATCTCGAAGTAACGCGCGTCCGATCGCACGCGCATCGCGGCGATCATTTCCGTGCGGTCAGCGGCAG
TTCCGACGCGCCGGGCTTCATGACATACCCGCGCAGATCGCGCGACGTCGACGATTCCGGTGACGCAATCGTCACACGGC
CCTCACCCGCGCCGCACCCAGATCACCTTGCCGTCGCGAATGCCGAGATTGCGGCGCTCCTCGCGGTAGTCCATCGTGCC
CGGCAACGACTTGCCGTCGCGCTCGAGCACGCGCCACAGGCAGCCGTCGAGCAGCGCGGTCGCATCGGCCTCGGTCTTGC
CGACCAGCGCATCGTCCGGTGCGGCGTCCGCCTTGCATGCCTGCGCGGCGCCCGACTGCAGAGGGGGCCTGGCCGCGCCG
CCCGCGGTGGCGTTGGGGTGTTTCGTGTCCATGTCCGCACATCCTGCAAAAGTTGCACTCGCAACGAGTGCAACGAGCAT
CGCGATCGTGTTCTTCATCGGTTTCTCCCTGTCGCGGGCCCGGCGGTCCATGTGCGGCACTCGTGCACGACCGGGCATCG
CATGCGTGATCGATTCCGCACGCTGCCGGCCGTTTCCTGA

Upstream 100 bases:

>100_bases
AAGGAAAGTTTGACGCGAGCCATTTGCCCGGCTGCTATGGCACACTTCGCGTCTGCGTAATTTCCTTGCACCGGGCGCCC
GGATTCCGCCCCATCCTGCC

Downstream 100 bases:

>100_bases
CGGAGCCGGCCAGCGCATGGCTGCCTTTCGCGAGCCGGCCGCGCCGCTCCGGCGCACCCGCGTCGCAAGCCCGGCCTGAC
GCCGAACCCGAGCGCATGTT

Product: lytic transglycosylase, catalytic

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 599; Mature: 598

Protein sequence:

>599_residues
MPRHTTRLFGRHSLPFASTIALACALCGVARADCLDDAAAFQHVSVALMRGIAQVESGMNPNAVNTNTNGTVDIGLMQIN
STWLPTLAREGITRESLFDACTNAYVGAWILSQNIRQLGPNWNAIGAYNSASPDKRLAYARKVYDAIRTMPDSPDTPMPI
LPPSFTPPQQAQTYNPFASLSVSAPPVTRARTISPASPPAPPQGGPAGPAGTYNFGWTVTGADQAKPTQVFDDGARVYVQ
FSDMKHVPAIFTETSAGRVLMSWELQFPYAVVTRPAQTLIFQLGPFEARAAQCGGRRHDRAGRDGRHGDGRRIGPAIEEA
GRCGSECRDEHGSQYGSETHRLGRCAVVREYAVHVGNGGGLAFDREYSCHAADGHHVEHAATRAGSSTGRGRSAVARQRG
RAVVHLEVTRVRSHAHRGDHFRAVSGSSDAPGFMTYPRRSRDVDDSGDAIVTRPSPAPHPDHLAVANAEIAALLAVVHRA
RQRLAVALEHAPQAAVEQRGRIGLGLADQRIVRCGVRLACLRGARLQRGPGRAARGGVGVFRVHVRTSCKSCTRNECNEH
RDRVLHRFLPVAGPAVHVRHSCTTGHRMRDRFRTLPAVS

Sequences:

>Translated_599_residues
MPRHTTRLFGRHSLPFASTIALACALCGVARADCLDDAAAFQHVSVALMRGIAQVESGMNPNAVNTNTNGTVDIGLMQIN
STWLPTLAREGITRESLFDACTNAYVGAWILSQNIRQLGPNWNAIGAYNSASPDKRLAYARKVYDAIRTMPDSPDTPMPI
LPPSFTPPQQAQTYNPFASLSVSAPPVTRARTISPASPPAPPQGGPAGPAGTYNFGWTVTGADQAKPTQVFDDGARVYVQ
FSDMKHVPAIFTETSAGRVLMSWELQFPYAVVTRPAQTLIFQLGPFEARAAQCGGRRHDRAGRDGRHGDGRRIGPAIEEA
GRCGSECRDEHGSQYGSETHRLGRCAVVREYAVHVGNGGGLAFDREYSCHAADGHHVEHAATRAGSSTGRGRSAVARQRG
RAVVHLEVTRVRSHAHRGDHFRAVSGSSDAPGFMTYPRRSRDVDDSGDAIVTRPSPAPHPDHLAVANAEIAALLAVVHRA
RQRLAVALEHAPQAAVEQRGRIGLGLADQRIVRCGVRLACLRGARLQRGPGRAARGGVGVFRVHVRTSCKSCTRNECNEH
RDRVLHRFLPVAGPAVHVRHSCTTGHRMRDRFRTLPAVS
>Mature_598_residues
PRHTTRLFGRHSLPFASTIALACALCGVARADCLDDAAAFQHVSVALMRGIAQVESGMNPNAVNTNTNGTVDIGLMQINS
TWLPTLAREGITRESLFDACTNAYVGAWILSQNIRQLGPNWNAIGAYNSASPDKRLAYARKVYDAIRTMPDSPDTPMPIL
PPSFTPPQQAQTYNPFASLSVSAPPVTRARTISPASPPAPPQGGPAGPAGTYNFGWTVTGADQAKPTQVFDDGARVYVQF
SDMKHVPAIFTETSAGRVLMSWELQFPYAVVTRPAQTLIFQLGPFEARAAQCGGRRHDRAGRDGRHGDGRRIGPAIEEAG
RCGSECRDEHGSQYGSETHRLGRCAVVREYAVHVGNGGGLAFDREYSCHAADGHHVEHAATRAGSSTGRGRSAVARQRGR
AVVHLEVTRVRSHAHRGDHFRAVSGSSDAPGFMTYPRRSRDVDDSGDAIVTRPSPAPHPDHLAVANAEIAALLAVVHRAR
QRLAVALEHAPQAAVEQRGRIGLGLADQRIVRCGVRLACLRGARLQRGPGRAARGGVGVFRVHVRTSCKSCTRNECNEHR
DRVLHRFLPVAGPAVHVRHSCTTGHRMRDRFRTLPAVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iagB/ipgF/P19 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 64657; Mature: 64525

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRHTTRLFGRHSLPFASTIALACALCGVARADCLDDAAAFQHVSVALMRGIAQVESGMN
CCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PNAVNTNTNGTVDIGLMQINSTWLPTLAREGITRESLFDACTNAYVGAWILSQNIRQLGP
CCCCCCCCCCEEEEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
NWNAIGAYNSASPDKRLAYARKVYDAIRTMPDSPDTPMPILPPSFTPPQQAQTYNPFASL
CCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEE
SVSAPPVTRARTISPASPPAPPQGGPAGPAGTYNFGWTVTGADQAKPTQVFDDGARVYVQ
EECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCEEEEE
FSDMKHVPAIFTETSAGRVLMSWELQFPYAVVTRPAQTLIFQLGPFEARAAQCGGRRHDR
ECCCCCCCCEEECCCCCEEEEEEEECCCHHHHCCCHHHHHEECCCCHHHHHHCCCCCCCC
AGRDGRHGDGRRIGPAIEEAGRCGSECRDEHGSQYGSETHRLGRCAVVREYAVHVGNGGG
CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHEEEHHHEECCCCC
LAFDREYSCHAADGHHVEHAATRAGSSTGRGRSAVARQRGRAVVHLEVTRVRSHAHRGDH
EEECCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCEEEEEEHHHHHHHHCCCCC
FRAVSGSSDAPGFMTYPRRSRDVDDSGDAIVTRPSPAPHPDHLAVANAEIAALLAVVHRA
EEEECCCCCCCCCEECCCCCCCCCCCCCEEEECCCCCCCCCCEEECCHHHHHHHHHHHHH
RQRLAVALEHAPQAAVEQRGRIGLGLADQRIVRCGVRLACLRGARLQRGPGRAARGGVGV
HHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEE
FRVHVRTSCKSCTRNECNEHRDRVLHRFLPVAGPAVHVRHSCTTGHRMRDRFRTLPAVS
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
PRHTTRLFGRHSLPFASTIALACALCGVARADCLDDAAAFQHVSVALMRGIAQVESGMN
CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PNAVNTNTNGTVDIGLMQINSTWLPTLAREGITRESLFDACTNAYVGAWILSQNIRQLGP
CCCCCCCCCCEEEEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
NWNAIGAYNSASPDKRLAYARKVYDAIRTMPDSPDTPMPILPPSFTPPQQAQTYNPFASL
CCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEE
SVSAPPVTRARTISPASPPAPPQGGPAGPAGTYNFGWTVTGADQAKPTQVFDDGARVYVQ
EECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCEEEEE
FSDMKHVPAIFTETSAGRVLMSWELQFPYAVVTRPAQTLIFQLGPFEARAAQCGGRRHDR
ECCCCCCCCEEECCCCCEEEEEEEECCCHHHHCCCHHHHHEECCCCHHHHHHCCCCCCCC
AGRDGRHGDGRRIGPAIEEAGRCGSECRDEHGSQYGSETHRLGRCAVVREYAVHVGNGGG
CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHEEEHHHEECCCCC
LAFDREYSCHAADGHHVEHAATRAGSSTGRGRSAVARQRGRAVVHLEVTRVRSHAHRGDH
EEECCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCEEEEEEHHHHHHHHCCCCC
FRAVSGSSDAPGFMTYPRRSRDVDDSGDAIVTRPSPAPHPDHLAVANAEIAALLAVVHRA
EEEECCCCCCCCCEECCCCCCCCCCCCCEEEECCCCCCCCCCEEECCHHHHHHHHHHHHH
RQRLAVALEHAPQAAVEQRGRIGLGLADQRIVRCGVRLACLRGARLQRGPGRAARGGVGV
HHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEE
FRVHVRTSCKSCTRNECNEHRDRVLHRFLPVAGPAVHVRHSCTTGHRMRDRFRTLPAVS
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7754225; 11677608; 12644504 [H]