| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107022232
Identifier: 107022232
GI number: 107022232
Start: 721083
End: 721529
Strand: Reverse
Name: 107022232
Synonym: Bcen_0676
Alternate gene names: NA
Gene position: 721529-721083 (Counterclockwise)
Preceding gene: 107022233
Following gene: 107022231
Centisome position: 21.9
GC content: 65.77
Gene sequence:
>447_bases ATGAACAAGAAAACGACCCTCAAGACGTTCGCCCTCGTCGCCGCGCTGTGCGCCGGCGCCCACGCGTATGCCGCCGGCGC GATCAGCGCGCAGAACGCGTGGGTGCGCTGGCTGCCGAACAAGCTGCCCGCGGGCGGCTACGTGACGCTCGTGAACACCG GCGACAAGCCGATCGATCTCGTCGACGTCGACAGCCCCGATTACGGGATGGCCATGCTGCACCAGACGGTCTCGAACGGC TCGACGCAGAAGATGGAGATGGTCGACAAGCTGACGATCCCCGCGCGCGGCAAGGTCGACATCGCGCCGGGCGGCTATCA CTTCATGCTCGAGGAACCGAAGCACACGATCAAGCCGGGCGACACCGTGCACCTGCGCCTGAAATTCTCCGACGGCGAGA CGGTCGATGCGCCATTCGCCGTGAAATCGCCGGCCCAGGCGAAGTGA
Upstream 100 bases:
>100_bases GCCGCGCGCGGCTGCTCGCGACCGATCGCGATTCGCCCGACGCCATCGCCGCCGATGTGCGCCGGATCATCGACACTGCC TCCACGACCTGAATTCCGCC
Downstream 100 bases:
>100_bases TGCGCGCGCGATGAATCTCCTGTACTGGCTCGATCCGTGGGAGCCGTCGCCGACCGTGGTCGTCGCGGTGCTGACGGCCG CCGTGCTGTTCGCACGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MNKKTTLKTFALVAALCAGAHAYAAGAISAQNAWVRWLPNKLPAGGYVTLVNTGDKPIDLVDVDSPDYGMAMLHQTVSNG STQKMEMVDKLTIPARGKVDIAPGGYHFMLEEPKHTIKPGDTVHLRLKFSDGETVDAPFAVKSPAQAK
Sequences:
>Translated_148_residues MNKKTTLKTFALVAALCAGAHAYAAGAISAQNAWVRWLPNKLPAGGYVTLVNTGDKPIDLVDVDSPDYGMAMLHQTVSNG STQKMEMVDKLTIPARGKVDIAPGGYHFMLEEPKHTIKPGDTVHLRLKFSDGETVDAPFAVKSPAQAK >Mature_148_residues MNKKTTLKTFALVAALCAGAHAYAAGAISAQNAWVRWLPNKLPAGGYVTLVNTGDKPIDLVDVDSPDYGMAMLHQTVSNG STQKMEMVDKLTIPARGKVDIAPGGYHFMLEEPKHTIKPGDTVHLRLKFSDGETVDAPFAVKSPAQAK
Specific function: Unknown
COG id: COG2847
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15847; Mature: 15847
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKTTLKTFALVAALCAGAHAYAAGAISAQNAWVRWLPNKLPAGGYVTLVNTGDKPIDL CCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCEEE VDVDSPDYGMAMLHQTVSNGSTQKMEMVDKLTIPARGKVDIAPGGYHFMLEEPKHTIKPG EECCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCCCCCC DTVHLRLKFSDGETVDAPFAVKSPAQAK CEEEEEEEECCCCCCCCCEEECCCCCCC >Mature Secondary Structure MNKKTTLKTFALVAALCAGAHAYAAGAISAQNAWVRWLPNKLPAGGYVTLVNTGDKPIDL CCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCEEE VDVDSPDYGMAMLHQTVSNGSTQKMEMVDKLTIPARGKVDIAPGGYHFMLEEPKHTIKPG EECCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCCCCCC DTVHLRLKFSDGETVDAPFAVKSPAQAK CEEEEEEEECCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA