| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107022095
Identifier: 107022095
GI number: 107022095
Start: 580010
End: 580582
Strand: Reverse
Name: 107022095
Synonym: Bcen_0538
Alternate gene names: NA
Gene position: 580582-580010 (Counterclockwise)
Preceding gene: 107022096
Following gene: 107022093
Centisome position: 17.62
GC content: 66.84
Gene sequence:
>573_bases GTGTCTCAAGCCTTCCTGATCTCCACCGGCGCCGTCGCCCTCGCTGAAATCGGCGACAAGACCCAACTGCTTTCCCTCGT TCTGGCCGCGCGCTATCGCAAGCCGGTGCCGATCATTCTGGGCGTGCTCGTCGCGACGCTCGTCAACCACGGTTTCGCCG GCGCGCTCGGCGAATGGCTGGGCGTGCTCGTGACGCCGTCGATCATGCGCTGGGCGCTCGCGTTCTCGTTCATCGCGATG GGGCTGTGGATTCTCGTACCGGACAAGCTCGACGAGGACGAAGCCAATGCGACCCGCTCGCGGCTCGGCGTGTTCGGCGC GACGCTGGTGGCGTTCTTCCTCGCGGAAATGGGCGACAAGACGCAGATCGCGACCGTCGCGCTGGCCGCACGCTTCCAGG ATTACATCGGCGTGGTGGCCGGCACCACGTTCGGGATGATGCTCGCGAACGTGCCGGCGATCCTGCTCGGCGACCGTTTC GCGCACCGTCTGCCGACGAAGCTCGTGCACGGGATCGCGGCCGTGCTGTTCGTCGTGCTCGGCGCGCTGGCGCTGTTGGG TATCGGGGTCTGA
Upstream 100 bases:
>100_bases TGGCCTGGCGAGACCGATGGTTCACTGCGCGCCGCATCAGGGCCCGGCGCGCGGCGAATCGTCGCTCGCACGCACAACAA CGGCCCGTGGAACCCCATTC
Downstream 100 bases:
>100_bases CAGACAGGAAGGTGGCTGGCGCGGCCGGACGGCCGCGCCGAGACGGATGCCGCGCTACTTCGCGACGGCCGCGCCCGAGG CCGGCGCCGCCGGCACCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSQAFLISTGAVALAEIGDKTQLLSLVLAARYRKPVPIILGVLVATLVNHGFAGALGEWLGVLVTPSIMRWALAFSFIAM GLWILVPDKLDEDEANATRSRLGVFGATLVAFFLAEMGDKTQIATVALAARFQDYIGVVAGTTFGMMLANVPAILLGDRF AHRLPTKLVHGIAAVLFVVLGALALLGIGV
Sequences:
>Translated_190_residues MSQAFLISTGAVALAEIGDKTQLLSLVLAARYRKPVPIILGVLVATLVNHGFAGALGEWLGVLVTPSIMRWALAFSFIAM GLWILVPDKLDEDEANATRSRLGVFGATLVAFFLAEMGDKTQIATVALAARFQDYIGVVAGTTFGMMLANVPAILLGDRF AHRLPTKLVHGIAAVLFVVLGALALLGIGV >Mature_189_residues SQAFLISTGAVALAEIGDKTQLLSLVLAARYRKPVPIILGVLVATLVNHGFAGALGEWLGVLVTPSIMRWALAFSFIAMG LWILVPDKLDEDEANATRSRLGVFGATLVAFFLAEMGDKTQIATVALAARFQDYIGVVAGTTFGMMLANVPAILLGDRFA HRLPTKLVHGIAAVLFVVLGALALLGIGV
Specific function: Unknown
COG id: COG2119
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20015; Mature: 19884
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAFLISTGAVALAEIGDKTQLLSLVLAARYRKPVPIILGVLVATLVNHGFAGALGEWL CCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHH GVLVTPSIMRWALAFSFIAMGLWILVPDKLDEDEANATRSRLGVFGATLVAFFLAEMGDK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TQIATVALAARFQDYIGVVAGTTFGMMLANVPAILLGDRFAHRLPTKLVHGIAAVLFVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALALLGIGV HHHHHHHCCC >Mature Secondary Structure SQAFLISTGAVALAEIGDKTQLLSLVLAARYRKPVPIILGVLVATLVNHGFAGALGEWL CCCEEEECCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHH GVLVTPSIMRWALAFSFIAMGLWILVPDKLDEDEANATRSRLGVFGATLVAFFLAEMGDK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TQIATVALAARFQDYIGVVAGTTFGMMLANVPAILLGDRFAHRLPTKLVHGIAAVLFVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALALLGIGV HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA