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The map label for this gene is ureD

Identifier: 107021982

GI number: 107021982

Start: 467622

End: 468497

Strand: Reverse

Name: ureD

Synonym: Bcen_0424

Alternate gene names: 107021982

Gene position: 468497-467622 (Counterclockwise)

Preceding gene: 107021983

Following gene: 107021981

Centisome position: 14.22

GC content: 73.63

Gene sequence:

>876_bases
ATGTCCGCCCCCGATTCGCATGCCCCGCTGTCCCGCCCCGCCGTCGCCAAGTCGTGGCGCGGCCGCCTCGAACTCGGCTT
CGAGCGGCACGGCGCGCGCACGACGCTCGCGCACCGGTTGCACGACGGCCCGCTGCGCGTGCAGCGGCCGCTGTACCCGG
AAGGCGACGCGATCTGCCATGCGGTGATCGTCCATCCGCCGGGCGGCGTCGCGGGCGGCGACCGGCTCGACATCGACATC
GCGCTCGGCGACGGCACGCACGCGGTACTGACGACGCCCGGCGCGACCAAGTGGTACAAATCGAACGGCCTCGATGCGAC
GCAGCGCATCGGCATCGCGGTCGGCCCGCACGCGAAGCTCGACTGGCTGCCGCAGAACAACCTGTTCTTCGACGCGGCGC
ACGCGGCGCTCGACTTCACGGTGACGCTCGGCGAAGGGGCAAGCGCGATCGGCTGGGACGCGACGCAGATCGGCCGGCAG
GCGGCCGGCGAAACCTGGGCAGCGGGACGCATCGCGTCGACCTCGGCGCTCGTCGCCGCCGACGGCCGGCCGCTCTGGAC
CGAGCGCGCGCTGCTCGACGCGCGCGACCCGCTGCGCGGCGCGCTGCAGGGCCTCGCCGGCTTTCCTGCCTACGGCACGC
CGTGGGCGGCCGGCGCCGCATGCGACGCCGCGCTCGCCGAAGCGCTCGCTGCGCGCATGCCGTTCGACGACACGCTCCGG
GCGGCCGCCACCTGCGTGACACCAGGCGTCGTGCTGGTGCGCGCGATATCGACGTCGATGGAAGCGTTGCAGCGCCACTT
CACCGACTGCTGGCTCCGCTTGCGCCCCATCGTGCACGACGTCGATGCGCGGCCGCTGCGTCTCTGGCAAACCTGA

Upstream 100 bases:

>100_bases
CGATCAAAGCCGGCACTTTCAACGCACGCGGCATCTGCATTATTGTTCCGGTAGCATCCACGTTCTTCGCACCCGCTTCC
TCGTTTCCCGTTCGCCGCCG

Downstream 100 bases:

>100_bases
CCGCGCACGCATCACGCACCGTTTCGGCGCAACGCCACCCCGCGCGCCGCACGCTCTCCATGCATCACGCACCACGAACG
CGCACGGAGGCACGTCGGAT

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MSAPDSHAPLSRPAVAKSWRGRLELGFERHGARTTLAHRLHDGPLRVQRPLYPEGDAICHAVIVHPPGGVAGGDRLDIDI
ALGDGTHAVLTTPGATKWYKSNGLDATQRIGIAVGPHAKLDWLPQNNLFFDAAHAALDFTVTLGEGASAIGWDATQIGRQ
AAGETWAAGRIASTSALVAADGRPLWTERALLDARDPLRGALQGLAGFPAYGTPWAAGAACDAALAEALAARMPFDDTLR
AAATCVTPGVVLVRAISTSMEALQRHFTDCWLRLRPIVHDVDARPLRLWQT

Sequences:

>Translated_291_residues
MSAPDSHAPLSRPAVAKSWRGRLELGFERHGARTTLAHRLHDGPLRVQRPLYPEGDAICHAVIVHPPGGVAGGDRLDIDI
ALGDGTHAVLTTPGATKWYKSNGLDATQRIGIAVGPHAKLDWLPQNNLFFDAAHAALDFTVTLGEGASAIGWDATQIGRQ
AAGETWAAGRIASTSALVAADGRPLWTERALLDARDPLRGALQGLAGFPAYGTPWAAGAACDAALAEALAARMPFDDTLR
AAATCVTPGVVLVRAISTSMEALQRHFTDCWLRLRPIVHDVDARPLRLWQT
>Mature_290_residues
SAPDSHAPLSRPAVAKSWRGRLELGFERHGARTTLAHRLHDGPLRVQRPLYPEGDAICHAVIVHPPGGVAGGDRLDIDIA
LGDGTHAVLTTPGATKWYKSNGLDATQRIGIAVGPHAKLDWLPQNNLFFDAAHAALDFTVTLGEGASAIGWDATQIGRQA
AGETWAAGRIASTSALVAADGRPLWTERALLDARDPLRGALQGLAGFPAYGTPWAAGAACDAALAEALAARMPFDDTLRA
AATCVTPGVVLVRAISTSMEALQRHFTDCWLRLRPIVHDVDARPLRLWQT

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URED_BURCA (Q1BYG9)

Other databases:

- EMBL:   CP000378
- RefSeq:   YP_620309.1
- STRING:   Q1BYG9
- GeneID:   4090993
- GenomeReviews:   CP000378_GR
- KEGG:   bcn:Bcen_0424
- eggNOG:   COG0829
- HOGENOM:   HBG711156
- OMA:   VQRPLYP
- ProtClustDB:   CLSK931036
- BioCyc:   BCEN331271:BCEN_0424-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01384
- InterPro:   IPR002669

Pfam domain/function: PF01774 UreD

EC number: NA

Molecular weight: Translated: 30920; Mature: 30789

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPDSHAPLSRPAVAKSWRGRLELGFERHGARTTLAHRLHDGPLRVQRPLYPEGDAICH
CCCCCCCCCCCCCHHHHHCCCCEEECHHHCCCHHHHHHHHCCCCCEECCCCCCCCCCEEE
AVIVHPPGGVAGGDRLDIDIALGDGTHAVLTTPGATKWYKSNGLDATQRIGIAVGPHAKL
EEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCEEECCCCCCHHHHCCEEECCCCCE
DWLPQNNLFFDAAHAALDFTVTLGEGASAIGWDATQIGRQAAGETWAAGRIASTSALVAA
EECCCCCEEEEECCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEE
DGRPLWTERALLDARDPLRGALQGLAGFPAYGTPWAAGAACDAALAEALAARMPFDDTLR
CCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH
AAATCVTPGVVLVRAISTSMEALQRHFTDCWLRLRPIVHDVDARPLRLWQT
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC
>Mature Secondary Structure 
SAPDSHAPLSRPAVAKSWRGRLELGFERHGARTTLAHRLHDGPLRVQRPLYPEGDAICH
CCCCCCCCCCCCHHHHHCCCCEEECHHHCCCHHHHHHHHCCCCCEECCCCCCCCCCEEE
AVIVHPPGGVAGGDRLDIDIALGDGTHAVLTTPGATKWYKSNGLDATQRIGIAVGPHAKL
EEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCEEECCCCCCHHHHCCEEECCCCCE
DWLPQNNLFFDAAHAALDFTVTLGEGASAIGWDATQIGRQAAGETWAAGRIASTSALVAA
EECCCCCEEEEECCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEE
DGRPLWTERALLDARDPLRGALQGLAGFPAYGTPWAAGAACDAALAEALAARMPFDDTLR
CCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH
AAATCVTPGVVLVRAISTSMEALQRHFTDCWLRLRPIVHDVDARPLRLWQT
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA