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The map label for this gene is kpsC [H]

Identifier: 107021844

GI number: 107021844

Start: 312418

End: 314346

Strand: Reverse

Name: kpsC [H]

Synonym: Bcen_0285

Alternate gene names: 107021844

Gene position: 314346-312418 (Counterclockwise)

Preceding gene: 107021846

Following gene: 107021843

Centisome position: 9.54

GC content: 60.71

Gene sequence:

>1929_bases
ATGAACGTATCGACACGCCGACGGCGGCTTGCCTACTCGCCCCTTCACTGGGCAATTGCGCCAGCACGAACGACAGTTTG
GCCAGGGCCGCTCGCCGCTCGCCCATCCACTTCCGCAGCGTTGCTTTCTTGGTTTGAAGCACCCGCCGGGATCCCGCCAT
CGAACGCGCTGATTAGTTCCGTCGACGGAATGCTCCGCTCGGAAACGCGACTCGGTGAATCGGAACGGATCGCAGCCCTG
ATGTCTCGCGTACTCGAGAGCGACGCGCTACACCTGCGCATGCGAATCGCTCCGTTGCCAAGCGCGCTGGCTGTCGCAGA
CAGAAAACACATCGTCATCATCGACGAACGGACCCGCTCCGAAATTGACGCGGGCGTACCTGCGCGCGAAAGGTTTCGTC
AGTTCTCCGCAATGCTCCAACATCTCGCAGAATTTCGGTCAGACGCGCAGATCTGGATTCTGCGTAGTAACGATCCTGGA
AGAGGCGCGTGGCTGTCTAAACGAGTACGATTGCCCCATAACGTGCAGCGCCTCTCCGGTGCGAGCTCACTTCGCGAAAT
CCTTCGACACGTCACCGAAATGTATACGGTTGCCGCGTCTGAAGGCATGGCTGCATTGCTCACCGGCATACCCGTCTATG
TGTTCGGCGCCCCCTATTACGCAGGCTGGGGACTCACAACCGATGCGCAGCCACTGACCGACCGTCACGCGCGCCCCACA
GTCGCCGCCCTGTTCGAAGCGGTCTTTTGCCGCTCGGCCCGCTACCTCGACCTCGAGACATATACAGTTGGCACAATCGA
CGCCCTTCTCGACGCCGTCGAAGTACAGCATGCGGTTGCGCACCGTTTCGCCGATCTGCAGCGCGTTGCCGGCATCCAAT
TTCAATGGTGGAAGCGCCCTTTTGCAACGCCGTATTTGAATGCTGGTGGAGGTCGCCTGCGCTGGAGTACACATCCTGTC
AAGGTTCGCACCGACGAACATGCGGCTTTATGGGGCGCACGCGACGCGACAGCACTGCCTTCCACTGCACAGCGGCTGAG
GATAGAGGACGGCTTCATCCATTCCTCTGGCCTGGGCTCCGACATGTCTGCACCACGCAGTCAGGTCATCGATCGGCGCG
GACTCTATTTCGACGCCAGCGCGCCCAGCGATCTATCGACACTGCTCAACACAATAGATTTCCCCCCAGCGGAGCTAGCA
CGCGCCGCGGCACTACGAAGCCGGATCGTCGCGGCCGGCATCACCAAATACAACCTCGGGCGCAAAGCGCCTACCTGGCT
GGCGCCCGTCAATCAAAAGGTCGTGCTTGTTGTTGGTCAAGTCGCCGATGACGCATCAATCCGGCTCGGCACGCGCGGCA
TCGACAACCTCGACGCACTGCTGCGCCGCGTACGCGAGCGTCTCCCCGACGCATTCATCGTGTATAAGCCCCATCCGGAT
GTGCTGTCCGGAAACCGGAACGGCCTCATCAACGCAGCCCAGTTGGCAAACATCGTCGATTCCGAGTCGGACATGATCTC
GCTGATCGAGGCTGTCGATGAAGTACACACACTCTCGTCCCTCGCGGGATTCGACGCGTTGCTGCGCGGCAAGAACGTCA
GCACCTACGGGCTACCGTTTTATGCTGGCTGGGGCCTGACCGACGACGACCTCGCGCCACTTCCGTGGCGAGAGCGCACG
TTGTCGCTCGACATGCTGGTAGCGGGCACTCTATTGCGCTATCCGCTTTACTGGGACTGGCAACTCCAACTCTTCACAAC
CCCGGAAGCAGTCGTTGGTCAGTTGTCGGAGGCCGCTGCACGTCCGTTGAAAACCGTCGCTCAAGACCGCTTGCGCCCAT
ACGTGAAAGCATTGCGCTGGACGCGCAATGTCGTGCGCCATCTCGTTTGGCGTTACCGGCAGAACTCGGCAGACCGCGAT
CAGGCGTAG

Upstream 100 bases:

>100_bases
CCAACGTGGTCCGATCACTTCGACCGAGTCGACGCGTTCCTTGAGTCACTCGCTTGACTCGAACAAGAATGTCCCGTCAC
GAGCCACCACGTTGCGCATC

Downstream 100 bases:

>100_bases
CCGCACAAGGGTCTGCCCAAGTGCGGTCCCGTACGTAGTTGTTACGAGTGACACGACCACATCCAGTTGCCCCGCTCTCG
CAAGTCGCGGTATAAGAACC

Product: capsule polysaccharide biosynthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 642; Mature: 642

Protein sequence:

>642_residues
MNVSTRRRRLAYSPLHWAIAPARTTVWPGPLAARPSTSAALLSWFEAPAGIPPSNALISSVDGMLRSETRLGESERIAAL
MSRVLESDALHLRMRIAPLPSALAVADRKHIVIIDERTRSEIDAGVPARERFRQFSAMLQHLAEFRSDAQIWILRSNDPG
RGAWLSKRVRLPHNVQRLSGASSLREILRHVTEMYTVAASEGMAALLTGIPVYVFGAPYYAGWGLTTDAQPLTDRHARPT
VAALFEAVFCRSARYLDLETYTVGTIDALLDAVEVQHAVAHRFADLQRVAGIQFQWWKRPFATPYLNAGGGRLRWSTHPV
KVRTDEHAALWGARDATALPSTAQRLRIEDGFIHSSGLGSDMSAPRSQVIDRRGLYFDASAPSDLSTLLNTIDFPPAELA
RAAALRSRIVAAGITKYNLGRKAPTWLAPVNQKVVLVVGQVADDASIRLGTRGIDNLDALLRRVRERLPDAFIVYKPHPD
VLSGNRNGLINAAQLANIVDSESDMISLIEAVDEVHTLSSLAGFDALLRGKNVSTYGLPFYAGWGLTDDDLAPLPWRERT
LSLDMLVAGTLLRYPLYWDWQLQLFTTPEAVVGQLSEAAARPLKTVAQDRLRPYVKALRWTRNVVRHLVWRYRQNSADRD
QA

Sequences:

>Translated_642_residues
MNVSTRRRRLAYSPLHWAIAPARTTVWPGPLAARPSTSAALLSWFEAPAGIPPSNALISSVDGMLRSETRLGESERIAAL
MSRVLESDALHLRMRIAPLPSALAVADRKHIVIIDERTRSEIDAGVPARERFRQFSAMLQHLAEFRSDAQIWILRSNDPG
RGAWLSKRVRLPHNVQRLSGASSLREILRHVTEMYTVAASEGMAALLTGIPVYVFGAPYYAGWGLTTDAQPLTDRHARPT
VAALFEAVFCRSARYLDLETYTVGTIDALLDAVEVQHAVAHRFADLQRVAGIQFQWWKRPFATPYLNAGGGRLRWSTHPV
KVRTDEHAALWGARDATALPSTAQRLRIEDGFIHSSGLGSDMSAPRSQVIDRRGLYFDASAPSDLSTLLNTIDFPPAELA
RAAALRSRIVAAGITKYNLGRKAPTWLAPVNQKVVLVVGQVADDASIRLGTRGIDNLDALLRRVRERLPDAFIVYKPHPD
VLSGNRNGLINAAQLANIVDSESDMISLIEAVDEVHTLSSLAGFDALLRGKNVSTYGLPFYAGWGLTDDDLAPLPWRERT
LSLDMLVAGTLLRYPLYWDWQLQLFTTPEAVVGQLSEAAARPLKTVAQDRLRPYVKALRWTRNVVRHLVWRYRQNSADRD
QA
>Mature_642_residues
MNVSTRRRRLAYSPLHWAIAPARTTVWPGPLAARPSTSAALLSWFEAPAGIPPSNALISSVDGMLRSETRLGESERIAAL
MSRVLESDALHLRMRIAPLPSALAVADRKHIVIIDERTRSEIDAGVPARERFRQFSAMLQHLAEFRSDAQIWILRSNDPG
RGAWLSKRVRLPHNVQRLSGASSLREILRHVTEMYTVAASEGMAALLTGIPVYVFGAPYYAGWGLTTDAQPLTDRHARPT
VAALFEAVFCRSARYLDLETYTVGTIDALLDAVEVQHAVAHRFADLQRVAGIQFQWWKRPFATPYLNAGGGRLRWSTHPV
KVRTDEHAALWGARDATALPSTAQRLRIEDGFIHSSGLGSDMSAPRSQVIDRRGLYFDASAPSDLSTLLNTIDFPPAELA
RAAALRSRIVAAGITKYNLGRKAPTWLAPVNQKVVLVVGQVADDASIRLGTRGIDNLDALLRRVRERLPDAFIVYKPHPD
VLSGNRNGLINAAQLANIVDSESDMISLIEAVDEVHTLSSLAGFDALLRGKNVSTYGLPFYAGWGLTDDDLAPLPWRERT
LSLDMLVAGTLLRYPLYWDWQLQLFTTPEAVVGQLSEAAARPLKTVAQDRLRPYVKALRWTRNVVRHLVWRYRQNSADRD
QA

Specific function: Unknown

COG id: COG3563

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti lipopolysaccharide processing protein lpsZ [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007833 [H]

Pfam domain/function: PF05159 Capsule_synth [H]

EC number: NA

Molecular weight: Translated: 71230; Mature: 71230

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVSTRRRRLAYSPLHWAIAPARTTVWPGPLAARPSTSAALLSWFEAPAGIPPSNALISS
CCCCHHHHHHCCCCCCEEEECCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHH
VDGMLRSETRLGESERIAALMSRVLESDALHLRMRIAPLPSALAVADRKHIVIIDERTRS
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHCCCCEEEEEECCCHH
EIDAGVPARERFRQFSAMLQHLAEFRSDAQIWILRSNDPGRGAWLSKRVRLPHNVQRLSG
HHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCCCCHHHHHCC
ASSLREILRHVTEMYTVAASEGMAALLTGIPVYVFGAPYYAGWGLTTDAQPLTDRHARPT
HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCH
VAALFEAVFCRSARYLDLETYTVGTIDALLDAVEVQHAVAHRFADLQRVAGIQFQWWKRP
HHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC
FATPYLNAGGGRLRWSTHPVKVRTDEHAALWGARDATALPSTAQRLRIEDGFIHSSGLGS
CCCCCCCCCCCEEEECCCCEEEECCCCHHHCCCCCCCCCCCHHHHEECCCCEEECCCCCC
DMSAPRSQVIDRRGLYFDASAPSDLSTLLNTIDFPPAELARAAALRSRIVAAGITKYNLG
CCCCCHHHHHHHCCCEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHCCC
RKAPTWLAPVNQKVVLVVGQVADDASIRLGTRGIDNLDALLRRVRERLPDAFIVYKPHPD
CCCCCEECCCCCEEEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCC
VLSGNRNGLINAAQLANIVDSESDMISLIEAVDEVHTLSSLAGFDALLRGKNVSTYGLPF
CCCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCE
YAGWGLTDDDLAPLPWRERTLSLDMLVAGTLLRYPLYWDWQLQLFTTPEAVVGQLSEAAA
EECCCCCCCCCCCCCCCHHHEEHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHHH
RPLKTVAQDRLRPYVKALRWTRNVVRHLVWRYRQNSADRDQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNVSTRRRRLAYSPLHWAIAPARTTVWPGPLAARPSTSAALLSWFEAPAGIPPSNALISS
CCCCHHHHHHCCCCCCEEEECCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHH
VDGMLRSETRLGESERIAALMSRVLESDALHLRMRIAPLPSALAVADRKHIVIIDERTRS
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHCCCCEEEEEECCCHH
EIDAGVPARERFRQFSAMLQHLAEFRSDAQIWILRSNDPGRGAWLSKRVRLPHNVQRLSG
HHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCCCCHHHHHCC
ASSLREILRHVTEMYTVAASEGMAALLTGIPVYVFGAPYYAGWGLTTDAQPLTDRHARPT
HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCH
VAALFEAVFCRSARYLDLETYTVGTIDALLDAVEVQHAVAHRFADLQRVAGIQFQWWKRP
HHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC
FATPYLNAGGGRLRWSTHPVKVRTDEHAALWGARDATALPSTAQRLRIEDGFIHSSGLGS
CCCCCCCCCCCEEEECCCCEEEECCCCHHHCCCCCCCCCCCHHHHEECCCCEEECCCCCC
DMSAPRSQVIDRRGLYFDASAPSDLSTLLNTIDFPPAELARAAALRSRIVAAGITKYNLG
CCCCCHHHHHHHCCCEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHCCC
RKAPTWLAPVNQKVVLVVGQVADDASIRLGTRGIDNLDALLRRVRERLPDAFIVYKPHPD
CCCCCEECCCCCEEEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCC
VLSGNRNGLINAAQLANIVDSESDMISLIEAVDEVHTLSSLAGFDALLRGKNVSTYGLPF
CCCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCE
YAGWGLTDDDLAPLPWRERTLSLDMLVAGTLLRYPLYWDWQLQLFTTPEAVVGQLSEAAA
EECCCCCCCCCCCCCCCHHHEEHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHHH
RPLKTVAQDRLRPYVKALRWTRNVVRHLVWRYRQNSADRDQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8397187; 7875563 [H]