| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107021835
Identifier: 107021835
GI number: 107021835
Start: 301446
End: 302123
Strand: Reverse
Name: 107021835
Synonym: Bcen_0275
Alternate gene names: NA
Gene position: 302123-301446 (Counterclockwise)
Preceding gene: 107021836
Following gene: 107021834
Centisome position: 9.17
GC content: 63.27
Gene sequence:
>678_bases ATGACTAATCTGGCACTCTTTGACCTCGATCACACGCTGATCCCGACCGATAGCGACCACGAATGGGGTCGCTTCATGGT GAAGCTCGGCATCGTCGACGCGGAAAGCTTCTCGCGTCAGAACGACCAGTTCTTCGCCGACTACAAGGCCGGGCAGCTCG ACATCCACGCGTACCTGTGCGCGATGCTCACGCCGCTCGCGAAGTATTCGCGCGCGCAGCTGGCCGAATGGCACGAGCAG TACATGCACGAGGTGATCCGGCCGGCGATGACGCCCGCCGCGCTCGAACTGGTACGCAAGCACCTCGATGCGGGCGACCT GTGCTGCGTCGTGACGGCAACCAACGAATTCATCACGCGCCCGATCGCGACCGCGTTCGGCGTCGACACGCTGATCGCGT GCGAGGTCGAAACGACCGACGGGCATCCCGATTCGCCGTACACGGGCCGGCCGACCGGCACGCCGAGCTATCGCGAAGGC AAGATCGTGCGCACCGAAGCGTGGCTCGCGTCGCTCGGCAAGCATTGGGACGACTTCGAACACAGCTATTTCTACAGCGA CTCGCACAACGACATCCCGCTGCTCGAGAAAGTCACCGACCCGATCGCGACCAACCCTGACGACACGCTGCGCGCGCATG CAAGCAACCGCGGCTGGCGTATCCTCGATCTCTTCTGA
Upstream 100 bases:
>100_bases CGGTCACGCTGCCGCTGCTGCGCCGGATGCTCGCGCGTCCCGGCGACGACATCACACCACCGGGCACGGGCCCGAACCGC TTCGAGTAAAATGCGCTTCC
Downstream 100 bases:
>100_bases ACGTCGTGATCAAAAAATTCATTCGCAAGCTCCTCGGCCAGGACGAAACCGAGCAAACGCATCCCGCAGCGGCCCCGGCC GACGAAGCGGCCCCTGCTGC
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MTNLALFDLDHTLIPTDSDHEWGRFMVKLGIVDAESFSRQNDQFFADYKAGQLDIHAYLCAMLTPLAKYSRAQLAEWHEQ YMHEVIRPAMTPAALELVRKHLDAGDLCCVVTATNEFITRPIATAFGVDTLIACEVETTDGHPDSPYTGRPTGTPSYREG KIVRTEAWLASLGKHWDDFEHSYFYSDSHNDIPLLEKVTDPIATNPDDTLRAHASNRGWRILDLF
Sequences:
>Translated_225_residues MTNLALFDLDHTLIPTDSDHEWGRFMVKLGIVDAESFSRQNDQFFADYKAGQLDIHAYLCAMLTPLAKYSRAQLAEWHEQ YMHEVIRPAMTPAALELVRKHLDAGDLCCVVTATNEFITRPIATAFGVDTLIACEVETTDGHPDSPYTGRPTGTPSYREG KIVRTEAWLASLGKHWDDFEHSYFYSDSHNDIPLLEKVTDPIATNPDDTLRAHASNRGWRILDLF >Mature_224_residues TNLALFDLDHTLIPTDSDHEWGRFMVKLGIVDAESFSRQNDQFFADYKAGQLDIHAYLCAMLTPLAKYSRAQLAEWHEQY MHEVIRPAMTPAALELVRKHLDAGDLCCVVTATNEFITRPIATAFGVDTLIACEVETTDGHPDSPYTGRPTGTPSYREGK IVRTEAWLASLGKHWDDFEHSYFYSDSHNDIPLLEKVTDPIATNPDDTLRAHASNRGWRILDLF
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25457; Mature: 25326
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00088 SOD_MN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLALFDLDHTLIPTDSDHEWGRFMVKLGIVDAESFSRQNDQFFADYKAGQLDIHAYLC CCCEEEEECCCEECCCCCCCHHHEEEEEEEEEEHHHHCCCCCCEEEECCCCCCHHHHHHH AMLTPLAKYSRAQLAEWHEQYMHEVIRPAMTPAALELVRKHLDAGDLCCVVTATNEFITR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHH PIATAFGVDTLIACEVETTDGHPDSPYTGRPTGTPSYREGKIVRTEAWLASLGKHWDDFE HHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCC HSYFYSDSHNDIPLLEKVTDPIATNPDDTLRAHASNRGWRILDLF CCEEECCCCCCCCHHHHHCCCCCCCCCHHHEECCCCCCEEEEEEC >Mature Secondary Structure TNLALFDLDHTLIPTDSDHEWGRFMVKLGIVDAESFSRQNDQFFADYKAGQLDIHAYLC CCEEEEECCCEECCCCCCCHHHEEEEEEEEEEHHHHCCCCCCEEEECCCCCCHHHHHHH AMLTPLAKYSRAQLAEWHEQYMHEVIRPAMTPAALELVRKHLDAGDLCCVVTATNEFITR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHH PIATAFGVDTLIACEVETTDGHPDSPYTGRPTGTPSYREGKIVRTEAWLASLGKHWDDFE HHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCC HSYFYSDSHNDIPLLEKVTDPIATNPDDTLRAHASNRGWRILDLF CCEEECCCCCCCCHHHHHCCCCCCCCCHHHEECCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA