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The map label for this gene is ruvB

Identifier: 107021765

GI number: 107021765

Start: 217796

End: 218866

Strand: Reverse

Name: ruvB

Synonym: Bcen_0205

Alternate gene names: 107021765

Gene position: 218866-217796 (Counterclockwise)

Preceding gene: 107021766

Following gene: 107021764

Centisome position: 6.64

GC content: 67.97

Gene sequence:

>1071_bases
ATGATTGAAACCGACAAACTCGCCACCGAGCAGCGGATCATCGCCGCCACGCCCGCCTCGTCGCACGAGGAGGTGTTCGA
ACGTGCGTTGCGGCCGCGCCAGCTCGACGACTACGTCGGCCAGGAAAAGGTGCGCGGCCAGCTCGAGATCTTCATCGAAG
CCGCGAAACGCCGCTCCGAGCCGCTCGATCACGTGCTGCTGTTCGGGCCGCCGGGTCTCGGCAAGACGACGCTCGCACAC
ATCATCGCGCGCGAGATGGGCGTGAACCTGCGTCAGACGTCGGGCCCCGTGCTCGAGCGCGCGGGCGATCTCGCCGCGCT
GCTGACGAACCTCGAAGCGAACGACGTGCTGTTCATCGACGAGATCCACCGGCTGTCGCCGGTCGTCGAGGAAATCCTGT
ATCCGGCGCTCGAGGATTACCAGATCGACATCATGATCGGCGAAGGCCCGGCCGCGCGCAGCGTGAAGCTCGACCTGCAG
CCGTTCACGCTGGTCGGCGCGACCACCCGCGCGGGGATGCTGACCAACCCGCTGCGCGATCGTTTCGGGATCGTCGCGCG
CCTCGAGTTCTACGACGCCGAACAACTGTCGCGCATCGTGCGCCGCTCGGCGTCGCTGCTGAATGCGCAGATCGATCCGA
ACGGCGCGCTGGAAATCGCGAAGCGCGCGCGCGGCACGCCGCGGATCGCGAACCGGCTGCTGCGCCGCGTGCGCGACTTC
GCGGAAGTGAAGGCCGACGGCCAGATCACCGCGGCCGTTGCCGACGCCGCGCTCGCGATGCTCGACGTCGATCCGGTCGG
CTTCGACCTGATGGACCGCAAGCTGCTCGAAGCGATCCTGTACAAGTTCGACGGCGGCCCGGTCGGCATCGACAACCTCG
CGGCAGCGATCGGCGAGGAGCGCGACACGATCGAGGACGTGCTCGAACCGTACCTGATCCAGCAGGGCTTCCTGCAGCGC
ACGCCGCGCGGGCGCGTCGCGACGCTGCTCACGTATCGCCACTTCGGGCTGTCGGTGCCCGATGCGCGCCGCACCGAACG
CGACGAGTGGGATACCCCCGACGGCAAGTAA

Upstream 100 bases:

>100_bases
CGATCCGGCCGTCGAAGCCAGTGTCGCGCCGCCGCGCGGCGCTCGCCAGTCGGCCGTTCGGCCAGGTGGTCCCGCCTGCG
CCGCGCGGTACAATGGCCGC

Downstream 100 bases:

>100_bases
TCCGCCGCCGAGCCGCCCCCGCCATGACGACGCCGCCCAGCCGCCACCCCACCGCACCCGCGCCGGGTCCGCGCTGGGCC
GAGCCGATCCGCAAGCGGCT

Product: Holliday junction DNA helicase RuvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MIETDKLATEQRIIAATPASSHEEVFERALRPRQLDDYVGQEKVRGQLEIFIEAAKRRSEPLDHVLLFGPPGLGKTTLAH
IIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQ
PFTLVGATTRAGMLTNPLRDRFGIVARLEFYDAEQLSRIVRRSASLLNAQIDPNGALEIAKRARGTPRIANRLLRRVRDF
AEVKADGQITAAVADAALAMLDVDPVGFDLMDRKLLEAILYKFDGGPVGIDNLAAAIGEERDTIEDVLEPYLIQQGFLQR
TPRGRVATLLTYRHFGLSVPDARRTERDEWDTPDGK

Sequences:

>Translated_356_residues
MIETDKLATEQRIIAATPASSHEEVFERALRPRQLDDYVGQEKVRGQLEIFIEAAKRRSEPLDHVLLFGPPGLGKTTLAH
IIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQ
PFTLVGATTRAGMLTNPLRDRFGIVARLEFYDAEQLSRIVRRSASLLNAQIDPNGALEIAKRARGTPRIANRLLRRVRDF
AEVKADGQITAAVADAALAMLDVDPVGFDLMDRKLLEAILYKFDGGPVGIDNLAAAIGEERDTIEDVLEPYLIQQGFLQR
TPRGRVATLLTYRHFGLSVPDARRTERDEWDTPDGK
>Mature_356_residues
MIETDKLATEQRIIAATPASSHEEVFERALRPRQLDDYVGQEKVRGQLEIFIEAAKRRSEPLDHVLLFGPPGLGKTTLAH
IIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQ
PFTLVGATTRAGMLTNPLRDRFGIVARLEFYDAEQLSRIVRRSASLLNAQIDPNGALEIAKRARGTPRIANRLLRRVRDF
AEVKADGQITAAVADAALAMLDVDPVGFDLMDRKLLEAILYKFDGGPVGIDNLAAAIGEERDTIEDVLEPYLIQQGFLQR
TPRGRVATLLTYRHFGLSVPDARRTERDEWDTPDGK

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family

Homologues:

Organism=Escherichia coli, GI1788167, Length=341, Percent_Identity=70.9677419354839, Blast_Score=478, Evalue=1e-136,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVB_BURCA (Q1BZ36)

Other databases:

- EMBL:   CP000378
- RefSeq:   YP_620092.1
- ProteinModelPortal:   Q1BZ36
- SMR:   Q1BZ36
- STRING:   Q1BZ36
- GeneID:   4091449
- GenomeReviews:   CP000378_GR
- KEGG:   bcn:Bcen_0205
- eggNOG:   COG2255
- HOGENOM:   HBG339960
- OMA:   EKFDGGP
- ProtClustDB:   PRK00080
- BioCyc:   BCEN331271:BCEN_0205-MONOMER
- HAMAP:   MF_00016
- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- ProDom:   PD005323
- SMART:   SM00382
- TIGRFAMs:   TIGR00635

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N

EC number: =3.6.4.12

Molecular weight: Translated: 39533; Mature: 39533

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIETDKLATEQRIIAATPASSHEEVFERALRPRQLDDYVGQEKVRGQLEIFIEAAKRRSE
CCCCHHHHHHCEEEEECCCCCHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCC
PLDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFID
CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEHH
EIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTNPLRD
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCEEEEECCHHCCHHHHHHHH
RFGIVARLEFYDAEQLSRIVRRSASLLNAQIDPNGALEIAKRARGTPRIANRLLRRVRDF
HHCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
AEVKADGQITAAVADAALAMLDVDPVGFDLMDRKLLEAILYKFDGGPVGIDNLAAAIGEE
HHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
RDTIEDVLEPYLIQQGFLQRTPRGRVATLLTYRHFGLSVPDARRTERDEWDTPDGK
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIETDKLATEQRIIAATPASSHEEVFERALRPRQLDDYVGQEKVRGQLEIFIEAAKRRSE
CCCCHHHHHHCEEEEECCCCCHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCC
PLDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFID
CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEHH
EIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTNPLRD
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCEEEEECCHHCCHHHHHHHH
RFGIVARLEFYDAEQLSRIVRRSASLLNAQIDPNGALEIAKRARGTPRIANRLLRRVRDF
HHCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
AEVKADGQITAAVADAALAMLDVDPVGFDLMDRKLLEAILYKFDGGPVGIDNLAAAIGEE
HHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
RDTIEDVLEPYLIQQGFLQRTPRGRVATLLTYRHFGLSVPDARRTERDEWDTPDGK
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA