| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107021713
Identifier: 107021713
GI number: 107021713
Start: 159136
End: 159552
Strand: Reverse
Name: 107021713
Synonym: Bcen_0153
Alternate gene names: NA
Gene position: 159552-159136 (Counterclockwise)
Preceding gene: 107021714
Following gene: 229220687
Centisome position: 4.84
GC content: 66.91
Gene sequence:
>417_bases ATGACCGATCCACGTCCGGCCAACGTGCCTTGGTTGACGCCCTACCTGGCCGTACGCAACGCGCGCGCGGCCATCGACTT CTTCCAGGCCGCATTCGGCTTCACGTTGCGCGACGTGCACGACGAGGACGGCGTGATCATGCACGTCGAGATGGCCTATC GCGGCCAGTTGATCGTGATGTTCGCGCCCGAAGGCGCGTTCGGCTCGCCCGCGCTCACACCGAAGCGCGCGAACGCCACC GCGCCGCAATCGTTCTATCTGTATGTCGACGACGTCGACGCCACCTGGCAGCGCGCGCTCGACGCGGGCGCGAAATCGCT GAGCGCGCCGCAGGATCAGTTCTGGGGCGACCGGTTCGCGCAGATCGAGGATCTCGACGGTTACCGCTGGGCGCTCGGGT GCCGTCTCGACGCATGA
Upstream 100 bases:
>100_bases GTTCGCCGCTGAACAGCCGGACGGTCGCAACGTTCCGTTGTTCCAGCATGAGACCGGCGCAGGCGCGAGAAGCGCCGACA CCGTGCAACAGGAGATTTTC
Downstream 100 bases:
>100_bases CCGAAACCGCCACACGCATGAACGAAGCCACCACCACCGCGGCCGTGCCGCGCTTTTTCGTCGACGCCGCGCTGCGCGCC GACGCCACGCTCGCGTTGCC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTDPRPANVPWLTPYLAVRNARAAIDFFQAAFGFTLRDVHDEDGVIMHVEMAYRGQLIVMFAPEGAFGSPALTPKRANAT APQSFYLYVDDVDATWQRALDAGAKSLSAPQDQFWGDRFAQIEDLDGYRWALGCRLDA
Sequences:
>Translated_138_residues MTDPRPANVPWLTPYLAVRNARAAIDFFQAAFGFTLRDVHDEDGVIMHVEMAYRGQLIVMFAPEGAFGSPALTPKRANAT APQSFYLYVDDVDATWQRALDAGAKSLSAPQDQFWGDRFAQIEDLDGYRWALGCRLDA >Mature_137_residues TDPRPANVPWLTPYLAVRNARAAIDFFQAAFGFTLRDVHDEDGVIMHVEMAYRGQLIVMFAPEGAFGSPALTPKRANATA PQSFYLYVDDVDATWQRALDAGAKSLSAPQDQFWGDRFAQIEDLDGYRWALGCRLDA
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 15387; Mature: 15256
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPRPANVPWLTPYLAVRNARAAIDFFQAAFGFTLRDVHDEDGVIMHVEMAYRGQLIVM CCCCCCCCCCEECHHHHHHCCHHHHHHHHHHHCCEEEECCCCCCEEEEEEECCCCEEEEE FAPEGAFGSPALTPKRANATAPQSFYLYVDDVDATWQRALDAGAKSLSAPQDQFWGDRFA ECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCHHHCCCCCHHHCCCCCC QIEDLDGYRWALGCRLDA EEECCCCEEEEEEEEECC >Mature Secondary Structure TDPRPANVPWLTPYLAVRNARAAIDFFQAAFGFTLRDVHDEDGVIMHVEMAYRGQLIVM CCCCCCCCCEECHHHHHHCCHHHHHHHHHHHCCEEEECCCCCCEEEEEEECCCCEEEEE FAPEGAFGSPALTPKRANATAPQSFYLYVDDVDATWQRALDAGAKSLSAPQDQFWGDRFA ECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCHHHCCCCCHHHCCCCCC QIEDLDGYRWALGCRLDA EEECCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]