| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107021686
Identifier: 107021686
GI number: 107021686
Start: 130338
End: 130982
Strand: Reverse
Name: 107021686
Synonym: Bcen_0126
Alternate gene names: NA
Gene position: 130982-130338 (Counterclockwise)
Preceding gene: 107021705
Following gene: 107021684
Centisome position: 3.98
GC content: 67.91
Gene sequence:
>645_bases ATGTCTCGCAAACCTCTTGTCGACCCGCGGCGCGTCCGCGAGGAAATCGCCCAGTCCGCCGCCCGCCTGATCGCGGAGGA CGGCCTGGACTACGCCGGCGCGAAACGCAAGGCCGCGCGCCAGTTGCTGGGCGATTCGCGCGTTGCCGGCGAATGGCTGC CGGATAACGACCAGATCGAGGAAGAACTGCGCGAGTATCTGTCGCTGTTCCAGAGTGACACGCAGCCGGACGAACTGCGC CGCCTGCGCGAGATCGCGCTCGACTGGATGCGCCGGCTCGCCGAGTTCCATCCTTATGTGACGGGCGCCGTGCTGAACGG CACCGCGAACGCGCATTCGGATATCCATTTGCAGGCATTCACCGACAACCCGAAGGACGTCGCGATCTACCTGCTGAACC AGAACGTCCAGTACGACGTATCCGAGACGCGGCATTTCGCGGGCCGCGGCGACGTCGAGACGCTCAGTTTCCTGTGGCGC CCGCGGCGCGACGTGGACGCGATCGGCATCCATCTCGCGCTGTATGCGAGCGACGACCTGCGCGGCGCGGTGAAGGCCGA CGCGCGCGGCCGCGTTGCCCGCGCGGACGCCGCCGCACTGCGCGCGCTCGTCGAGGCAGGCCAGGCCCCTTCCGAACCGG AATGA
Upstream 100 bases:
>100_bases GCGGCCCGAACGATGCGCGCGAACGGCGTCGGCACCGTCGGGCGGCGGGCCGCCGCACCCGTGCTCGGGCGCCGCGACGA TCGAGTATGATTGCCGGATC
Downstream 100 bases:
>100_bases TTCAACGTTGACGTCCTCCTCCGCCCAAAAGGCAGAGGATTCCCACACCTGGCGATGCACGTCCGCATCGGAGAATGTTC AGCGCAGCGTTGGTATCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MSRKPLVDPRRVREEIAQSAARLIAEDGLDYAGAKRKAARQLLGDSRVAGEWLPDNDQIEEELREYLSLFQSDTQPDELR RLREIALDWMRRLAEFHPYVTGAVLNGTANAHSDIHLQAFTDNPKDVAIYLLNQNVQYDVSETRHFAGRGDVETLSFLWR PRRDVDAIGIHLALYASDDLRGAVKADARGRVARADAAALRALVEAGQAPSEPE
Sequences:
>Translated_214_residues MSRKPLVDPRRVREEIAQSAARLIAEDGLDYAGAKRKAARQLLGDSRVAGEWLPDNDQIEEELREYLSLFQSDTQPDELR RLREIALDWMRRLAEFHPYVTGAVLNGTANAHSDIHLQAFTDNPKDVAIYLLNQNVQYDVSETRHFAGRGDVETLSFLWR PRRDVDAIGIHLALYASDDLRGAVKADARGRVARADAAALRALVEAGQAPSEPE >Mature_213_residues SRKPLVDPRRVREEIAQSAARLIAEDGLDYAGAKRKAARQLLGDSRVAGEWLPDNDQIEEELREYLSLFQSDTQPDELRR LREIALDWMRRLAEFHPYVTGAVLNGTANAHSDIHLQAFTDNPKDVAIYLLNQNVQYDVSETRHFAGRGDVETLSFLWRP RRDVDAIGIHLALYASDDLRGAVKADARGRVARADAAALRALVEAGQAPSEPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23984; Mature: 23853
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKPLVDPRRVREEIAQSAARLIAEDGLDYAGAKRKAARQLLGDSRVAGEWLPDNDQIE CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH EELREYLSLFQSDTQPDELRRLREIALDWMRRLAEFHPYVTGAVLNGTANAHSDIHLQAF HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCEEEEEE TDNPKDVAIYLLNQNVQYDVSETRHFAGRGDVETLSFLWRPRRDVDAIGIHLALYASDDL CCCCCCEEEEEECCCCEECHHHHHHCCCCCCHHHHHHHHCCCCCCHHHEEEEEEEECCCC RGAVKADARGRVARADAAALRALVEAGQAPSEPE CHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SRKPLVDPRRVREEIAQSAARLIAEDGLDYAGAKRKAARQLLGDSRVAGEWLPDNDQIE CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH EELREYLSLFQSDTQPDELRRLREIALDWMRRLAEFHPYVTGAVLNGTANAHSDIHLQAF HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCEEEEEE TDNPKDVAIYLLNQNVQYDVSETRHFAGRGDVETLSFLWRPRRDVDAIGIHLALYASDDL CCCCCCEEEEEECCCCEECHHHHHHCCCCCCHHHHHHHHCCCCCCHHHEEEEEEEECCCC RGAVKADARGRVARADAAALRALVEAGQAPSEPE CHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA