| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is accC [H]
Identifier: 107021681
GI number: 107021681
Start: 126502
End: 127869
Strand: Reverse
Name: accC [H]
Synonym: Bcen_0121
Alternate gene names: 107021681
Gene position: 127869-126502 (Counterclockwise)
Preceding gene: 107021682
Following gene: 107021680
Centisome position: 3.88
GC content: 64.18
Gene sequence:
>1368_bases ATGTTTGAAAAAATCCTCATTGCCAACCGCGGTGAAATCGCGCTGCGCATCCAGCGCGCGTGCCGCGAACTCGGCGTCAA GACGGTGGTCGTCTACTCGGAAGCCGACAAGGAAGCCAAGTACGTGCGCCTCGCGGACGAAGCCGTCTGTATCGGCCCGG CCCCGTCGAACCTGAGCTACCTGAACATGCCGGCGCTGATCAGCGCCGCGGAAGTCACCGATGCCGAGGCGATCCACCCC GGCTACGGCTTCCTGTCCGAGAACGCCGATTTCGCGGAGCGCGTCGAGCAATCGGGCTTCACGTTCATCGGCCCGCGCCC GGAAACGATCCGCATGATGGGTGACAAGGTCACCGCGAAGCAGACGATGATCAAGACCGGCGTGCCGTGCGTGCCGGGCT CGGAAGGCGCGTTGCCGGACGATCCGAAGGAGATCGTCAAGATTGCGCGCACGATCGGCTATCCGGTCATCATCAAGGCG GCAGGTGGCGGCGGCGGGCGCGGGATGCGCGTCGTGCACACCGAGGCCGCGCTCGTCAACGCGGTCAACATGACCCGCGA GGAAGCCGGCCGTGCGTTCGGCAACCCGCAGGTGTACATGGAGAAGTTCCTCGAGAACCCGCGCCACATCGAGATCCAGG TGCTGTCGGACGCGTACAAGAACGCGATCTGGCTCGGCGAGCGCGACTGCTCGATGCAGCGCCGTCACCAGAAGGTGATC GAGGAAGCGCCGGCGCCCGGCATTCCGCGTCGCCTGATCGACCGCATCGGCGACCGCTGCGCGGACGCATGCAAGAAGAT GGGCTACCTCGGCGCGGGCACGTTCGAATTCCTGTACGAGAACGGCGAGTTCTACTTCATCGAGATGAACACGCGCGTGC AGGTCGAGCACCCGGTATCGGAGCTGATCACGGGCGTCGACATCGTGCAGGAACAGATCCGCATCGCGGCCGGCGAAAAG CTCACGCTGCGCCAGCGCGACATCCAGTTCCGCGGACATGCGATCGAATGCCGGATCAACGCCGAAGATCCGTTCAAGTT CACGCCGTCGCCGGGCCGGATCACGTCGTGGCATACGCCGGGCGGCCCCGGCGTGCGCGTCGATTCGCACGCCTACAATG GCTATTTCGTGCCGCCGAACTATGATTCGATGATCGGCAAGCTGATCACCTACGGCGCGACGCGCGAGCAGGCAATCAGC CGGATGCGCATCGCACTGTCGGAAATGGTCGTCGAAGGCATCCAGACCAACATCCCGCTGCACCGCGAGCTGATGATCGA CGCGAAGTTCGTCGAAGGCGGCACCAGCATCCACTACCTCGAAAACCGGCTCGCGCAGAAGCAGCAGGTCGCACCGGAAG AAGCGTAA
Upstream 100 bases:
>100_bases CGTGATCGGCTAAGCCCGCCGCGCGGCCCTGCCGGCCGCGCGCCGCCGAGATGCTCGCCAGGCGCCGTTCGCGCGCCCCT CGAAGAGACGAATACTCGCT
Downstream 100 bases:
>100_bases GCATGAGTTATCGCGAACTCGTCGTCGAACTGGCCCGCGAGCATGCGGAGGCCCTGTCCGACGCGCTGCTCGATCTCGGC GCGCTGTCGGTGTCCGTCGA
Product: acetyl-CoA carboxylase biotin carboxylase subunit
Products: NA
Alternate protein names: Acetyl-CoA carboxylase subunit A; ACC [H]
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MFEKILIANRGEIALRIQRACRELGVKTVVVYSEADKEAKYVRLADEAVCIGPAPSNLSYLNMPALISAAEVTDAEAIHP GYGFLSENADFAERVEQSGFTFIGPRPETIRMMGDKVTAKQTMIKTGVPCVPGSEGALPDDPKEIVKIARTIGYPVIIKA AGGGGGRGMRVVHTEAALVNAVNMTREEAGRAFGNPQVYMEKFLENPRHIEIQVLSDAYKNAIWLGERDCSMQRRHQKVI EEAPAPGIPRRLIDRIGDRCADACKKMGYLGAGTFEFLYENGEFYFIEMNTRVQVEHPVSELITGVDIVQEQIRIAAGEK LTLRQRDIQFRGHAIECRINAEDPFKFTPSPGRITSWHTPGGPGVRVDSHAYNGYFVPPNYDSMIGKLITYGATREQAIS RMRIALSEMVVEGIQTNIPLHRELMIDAKFVEGGTSIHYLENRLAQKQQVAPEEA
Sequences:
>Translated_455_residues MFEKILIANRGEIALRIQRACRELGVKTVVVYSEADKEAKYVRLADEAVCIGPAPSNLSYLNMPALISAAEVTDAEAIHP GYGFLSENADFAERVEQSGFTFIGPRPETIRMMGDKVTAKQTMIKTGVPCVPGSEGALPDDPKEIVKIARTIGYPVIIKA AGGGGGRGMRVVHTEAALVNAVNMTREEAGRAFGNPQVYMEKFLENPRHIEIQVLSDAYKNAIWLGERDCSMQRRHQKVI EEAPAPGIPRRLIDRIGDRCADACKKMGYLGAGTFEFLYENGEFYFIEMNTRVQVEHPVSELITGVDIVQEQIRIAAGEK LTLRQRDIQFRGHAIECRINAEDPFKFTPSPGRITSWHTPGGPGVRVDSHAYNGYFVPPNYDSMIGKLITYGATREQAIS RMRIALSEMVVEGIQTNIPLHRELMIDAKFVEGGTSIHYLENRLAQKQQVAPEEA >Mature_455_residues MFEKILIANRGEIALRIQRACRELGVKTVVVYSEADKEAKYVRLADEAVCIGPAPSNLSYLNMPALISAAEVTDAEAIHP GYGFLSENADFAERVEQSGFTFIGPRPETIRMMGDKVTAKQTMIKTGVPCVPGSEGALPDDPKEIVKIARTIGYPVIIKA AGGGGGRGMRVVHTEAALVNAVNMTREEAGRAFGNPQVYMEKFLENPRHIEIQVLSDAYKNAIWLGERDCSMQRRHQKVI EEAPAPGIPRRLIDRIGDRCADACKKMGYLGAGTFEFLYENGEFYFIEMNTRVQVEHPVSELITGVDIVQEQIRIAAGEK LTLRQRDIQFRGHAIECRINAEDPFKFTPSPGRITSWHTPGGPGVRVDSHAYNGYFVPPNYDSMIGKLITYGATREQAIS RMRIALSEMVVEGIQTNIPLHRELMIDAKFVEGGTSIHYLENRLAQKQQVAPEEA
Specific function: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA [H]
COG id: COG0439
COG function: function code I; Biotin carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotin carboxylation domain [H]
Homologues:
Organism=Homo sapiens, GI189095269, Length=445, Percent_Identity=48.314606741573, Blast_Score=424, Evalue=1e-119, Organism=Homo sapiens, GI295821183, Length=445, Percent_Identity=48.314606741573, Blast_Score=423, Evalue=1e-118, Organism=Homo sapiens, GI65506442, Length=445, Percent_Identity=48.314606741573, Blast_Score=423, Evalue=1e-118, Organism=Homo sapiens, GI116805327, Length=440, Percent_Identity=47.7272727272727, Blast_Score=412, Evalue=1e-115, Organism=Homo sapiens, GI106049528, Length=446, Percent_Identity=44.8430493273543, Blast_Score=368, Evalue=1e-102, Organism=Homo sapiens, GI106049295, Length=446, Percent_Identity=44.8430493273543, Blast_Score=368, Evalue=1e-102, Organism=Homo sapiens, GI106049292, Length=446, Percent_Identity=44.8430493273543, Blast_Score=368, Evalue=1e-102, Organism=Homo sapiens, GI38679960, Length=519, Percent_Identity=31.4065510597302, Blast_Score=235, Evalue=6e-62, Organism=Homo sapiens, GI38679977, Length=519, Percent_Identity=31.4065510597302, Blast_Score=235, Evalue=8e-62, Organism=Homo sapiens, GI38679967, Length=519, Percent_Identity=31.4065510597302, Blast_Score=235, Evalue=8e-62, Organism=Homo sapiens, GI38679971, Length=519, Percent_Identity=31.4065510597302, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI38679974, Length=519, Percent_Identity=31.4065510597302, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI134142062, Length=519, Percent_Identity=30.8285163776493, Blast_Score=227, Evalue=2e-59, Organism=Escherichia coli, GI1789654, Length=449, Percent_Identity=66.815144766147, Blast_Score=605, Evalue=1e-174, Organism=Caenorhabditis elegans, GI17567343, Length=443, Percent_Identity=46.27539503386, Blast_Score=401, Evalue=1e-112, Organism=Caenorhabditis elegans, GI71987519, Length=455, Percent_Identity=45.2747252747253, Blast_Score=381, Evalue=1e-106, Organism=Caenorhabditis elegans, GI17562816, Length=447, Percent_Identity=43.6241610738255, Blast_Score=345, Evalue=2e-95, Organism=Caenorhabditis elegans, GI133931226, Length=496, Percent_Identity=29.2338709677419, Blast_Score=198, Evalue=5e-51, Organism=Caenorhabditis elegans, GI71997168, Length=515, Percent_Identity=27.9611650485437, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI71997163, Length=515, Percent_Identity=27.9611650485437, Blast_Score=189, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6319685, Length=445, Percent_Identity=40.8988764044944, Blast_Score=348, Evalue=8e-97, Organism=Saccharomyces cerevisiae, GI6319695, Length=459, Percent_Identity=44.6623093681917, Blast_Score=343, Evalue=4e-95, Organism=Saccharomyces cerevisiae, GI6321376, Length=459, Percent_Identity=45.3159041394335, Blast_Score=334, Evalue=2e-92, Organism=Saccharomyces cerevisiae, GI6324343, Length=523, Percent_Identity=30.2103250478011, Blast_Score=224, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6323863, Length=480, Percent_Identity=31.6666666666667, Blast_Score=220, Evalue=5e-58, Organism=Drosophila melanogaster, GI24651757, Length=433, Percent_Identity=45.7274826789838, Blast_Score=377, Evalue=1e-105, Organism=Drosophila melanogaster, GI281363050, Length=444, Percent_Identity=45.945945945946, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652224, Length=444, Percent_Identity=45.945945945946, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652222, Length=444, Percent_Identity=45.945945945946, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652220, Length=444, Percent_Identity=45.945945945946, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652218, Length=444, Percent_Identity=45.945945945946, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652212, Length=444, Percent_Identity=45.945945945946, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652210, Length=444, Percent_Identity=45.945945945946, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652214, Length=444, Percent_Identity=45.945945945946, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI19921944, Length=444, Percent_Identity=45.945945945946, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652216, Length=444, Percent_Identity=45.945945945946, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24651759, Length=396, Percent_Identity=44.6969696969697, Blast_Score=336, Evalue=2e-92, Organism=Drosophila melanogaster, GI161076409, Length=513, Percent_Identity=29.4346978557505, Blast_Score=212, Evalue=5e-55, Organism=Drosophila melanogaster, GI24586458, Length=513, Percent_Identity=29.4346978557505, Blast_Score=212, Evalue=5e-55, Organism=Drosophila melanogaster, GI161076407, Length=513, Percent_Identity=29.4346978557505, Blast_Score=212, Evalue=5e-55, Organism=Drosophila melanogaster, GI24586460, Length=513, Percent_Identity=29.4346978557505, Blast_Score=212, Evalue=5e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004549 - InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14; =6.4.1.2 [H]
Molecular weight: Translated: 50451; Mature: 50451
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEKILIANRGEIALRIQRACRELGVKTVVVYSEADKEAKYVRLADEAVCIGPAPSNLSY CCCEEEEECCCCEEHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCEEEECCCCCCCCE LNMPALISAAEVTDAEAIHPGYGFLSENADFAERVEQSGFTFIGPRPETIRMMGDKVTAK ECCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCEEHCCCCCHHHH QTMIKTGVPCVPGSEGALPDDPKEIVKIARTIGYPVIIKAAGGGGGRGMRVVHTEAALVN HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEHHHHHHH AVNMTREEAGRAFGNPQVYMEKFLENPRHIEIQVLSDAYKNAIWLGERDCSMQRRHQKVI HHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECHHHHCEEEECCCCHHHHHHHHHHH EEAPAPGIPRRLIDRIGDRCADACKKMGYLGAGTFEFLYENGEFYFIEMNTRVQVEHPVS HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCEEEECCCHH ELITGVDIVQEQIRIAAGEKLTLRQRDIQFRGHAIECRINAEDPFKFTPSPGRITSWHTP HHHHHHHHHHHHHHHHCCCEEEEEHHCEEECCEEEEEEECCCCCCEECCCCCCEEECCCC GGPGVRVDSHAYNGYFVPPNYDSMIGKLITYGATREQAISRMRIALSEMVVEGIQTNIPL CCCCEEECCCCCCCEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC HRELMIDAKFVEGGTSIHYLENRLAQKQQVAPEEA CCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MFEKILIANRGEIALRIQRACRELGVKTVVVYSEADKEAKYVRLADEAVCIGPAPSNLSY CCCEEEEECCCCEEHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCEEEECCCCCCCCE LNMPALISAAEVTDAEAIHPGYGFLSENADFAERVEQSGFTFIGPRPETIRMMGDKVTAK ECCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCEEHCCCCCHHHH QTMIKTGVPCVPGSEGALPDDPKEIVKIARTIGYPVIIKAAGGGGGRGMRVVHTEAALVN HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEHHHHHHH AVNMTREEAGRAFGNPQVYMEKFLENPRHIEIQVLSDAYKNAIWLGERDCSMQRRHQKVI HHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECHHHHCEEEECCCCHHHHHHHHHHH EEAPAPGIPRRLIDRIGDRCADACKKMGYLGAGTFEFLYENGEFYFIEMNTRVQVEHPVS HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCEEEECCCHH ELITGVDIVQEQIRIAAGEKLTLRQRDIQFRGHAIECRINAEDPFKFTPSPGRITSWHTP HHHHHHHHHHHHHHHHCCCEEEEEHHCEEECCEEEEEEECCCCCCEECCCCCCEEECCCC GGPGVRVDSHAYNGYFVPPNYDSMIGKLITYGATREQAISRMRIALSEMVVEGIQTNIPL CCCCEEECCCCCCCEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC HRELMIDAKFVEGGTSIHYLENRLAQKQQVAPEEA CCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7693652; 10984043 [H]