Definition Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Accession NC_008060
Length 3,294,563

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The map label for this gene is 107021679

Identifier: 107021679

GI number: 107021679

Start: 124151

End: 125551

Strand: Reverse

Name: 107021679

Synonym: Bcen_0119

Alternate gene names: NA

Gene position: 125551-124151 (Counterclockwise)

Preceding gene: 107021680

Following gene: 107021678

Centisome position: 3.81

GC content: 70.38

Gene sequence:

>1401_bases
ATGCTTCTTGCGACGCGCTGCCCTCATTGCGAAACCGTCTTCCGGCTGCAGCAGGAACAGCTCTCGCTGCATCAGGGGCT
CGTGCGCTGCGGGCATTGCCACGAAGTCTTCAACGCCGCCGAATCGCTCGTTCCCGAGTACGCGCAGCAGCCCGAACCGG
CATTGACCGAACCGGCTGCCGCGCCGGATAGCAGCGACACGCACCAGCAGGCCGCACCGGCCCGGTTGTTCGCCACCGAC
ACGCCGCCCGAATTGCCGACCGGCACCGATTACAAGCCGGAAGGCTGGGACATGTGGGCGCCGTGGCTCGACGCCGGCGT
CGATCCGTCGCTGCAGCACAGCGTCGAGACCGTGCGCACCGAGCCGCTGATACCGCTCGCGCTCCCGTCCACGGAAGCCG
GCGTCGTTCATCTGTCGGGTACGCCCGCGCCGTTCGCGTCCTCTCCGGCCGAACTCGATTCGTCGACTGCCGTCGAGCAA
CCGGCGGAACTACATTCGCCGCAGGCGCAACACGCACCGCACGAAACCGAAGAAACCGCGCCGTCGCCCGCGCCGCTCGA
GCGCGACCCGCGCGAGCCTCGCTTCGTCGCCCACCTTCCGTCGGAAACCGAAACCGCCGCCGAGCCGGCCGAACCCGTCG
TCCCCACGCACTTCGCCGCGCCGGACGACGAACGCGCGCCGCGCGAACCGCGTTTTGCGTTCACGCCCGCACCGGCCGTC
ACCGAAGCCGAAACCGCATCGGAACCCGGCACCTTCGCCCGACACGACACGGCCCCGCCCGCAGCGGCAGCCGATGAACC
GGTCGCGCAACCGGCCGTCCCGCCGGTCGTCCAACCGGCCGTCCCATTCCCCGCCGCACTGTCCGACGACGATCGTCCGC
ACTTCGCCGTCACGCGCGAGACACGCGCGCCGCAGCGACGCGGGATGCTCGGCGGCTTTTTCGGCGGTCTCGTCGCGGCC
GCGCTGGTCGGATTGCTCGCCGCGCAACTGGCGTGGTGGCAACGCGAAACGCTGATGATCTACTGGCCCGTCACGCAAGG
CTGGTTCCGGCAGGCCTGCGCGCCGCTCGGCTGCACGGTCACGCCGCCGCGCGCGATCGACGGGCTGCGGCTCGACGCGA
CCGACCTGCGCCAGCTCGATGGCCCGCGCGAGCTCGAACTGAAGGTGCCGCTGACGAACCGCTACCGCGTCGCGCTCGCG
TATCCGTCGGTCGAACTCACGCTGCTCGACGACACCAATCACGTCACCGTGCGCCGCGTGCTCGCGCCGCGCGATTACGT
ACGCCCGGGCACGCCGATCGACGCCGGGCTGCCGCCCGGCACGACGCAGACGATGGTGGTCCGCCTCGAAACGAACGGCA
CGCCCGCCTCGAATTTCCGCGTCCAGATCTTCTATCCGTGA

Upstream 100 bases:

>100_bases
GCGCGAACACGAAGGTTGGGTATGCCTTGCCGGAACCCGCCGCGAAAGCCATTAGAATAGCGCTGTCCTTCACTCTGGCC
AGCAGGCCGCCCGGCTCGAC

Downstream 100 bases:

>100_bases
CGCGTCGCGGCGCGCTTGCGCGCCCGTCTCAACCCGCGCGCCCGAGCGGCGCGCTATTTCGGAGCACGAACATGAGCAAA
GTTACGCTGGGTGGCAACCC

Product: Zinc finger/thioredoxin

Products: NA

Alternate protein names: Zinc Finger/Thioredoxin Domain Protein; Zinc Finger/Thioredoxin; FHA Domain-Containing Protein

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MLLATRCPHCETVFRLQQEQLSLHQGLVRCGHCHEVFNAAESLVPEYAQQPEPALTEPAAAPDSSDTHQQAAPARLFATD
TPPELPTGTDYKPEGWDMWAPWLDAGVDPSLQHSVETVRTEPLIPLALPSTEAGVVHLSGTPAPFASSPAELDSSTAVEQ
PAELHSPQAQHAPHETEETAPSPAPLERDPREPRFVAHLPSETETAAEPAEPVVPTHFAAPDDERAPREPRFAFTPAPAV
TEAETASEPGTFARHDTAPPAAAADEPVAQPAVPPVVQPAVPFPAALSDDDRPHFAVTRETRAPQRRGMLGGFFGGLVAA
ALVGLLAAQLAWWQRETLMIYWPVTQGWFRQACAPLGCTVTPPRAIDGLRLDATDLRQLDGPRELELKVPLTNRYRVALA
YPSVELTLLDDTNHVTVRRVLAPRDYVRPGTPIDAGLPPGTTQTMVVRLETNGTPASNFRVQIFYP

Sequences:

>Translated_466_residues
MLLATRCPHCETVFRLQQEQLSLHQGLVRCGHCHEVFNAAESLVPEYAQQPEPALTEPAAAPDSSDTHQQAAPARLFATD
TPPELPTGTDYKPEGWDMWAPWLDAGVDPSLQHSVETVRTEPLIPLALPSTEAGVVHLSGTPAPFASSPAELDSSTAVEQ
PAELHSPQAQHAPHETEETAPSPAPLERDPREPRFVAHLPSETETAAEPAEPVVPTHFAAPDDERAPREPRFAFTPAPAV
TEAETASEPGTFARHDTAPPAAAADEPVAQPAVPPVVQPAVPFPAALSDDDRPHFAVTRETRAPQRRGMLGGFFGGLVAA
ALVGLLAAQLAWWQRETLMIYWPVTQGWFRQACAPLGCTVTPPRAIDGLRLDATDLRQLDGPRELELKVPLTNRYRVALA
YPSVELTLLDDTNHVTVRRVLAPRDYVRPGTPIDAGLPPGTTQTMVVRLETNGTPASNFRVQIFYP
>Mature_466_residues
MLLATRCPHCETVFRLQQEQLSLHQGLVRCGHCHEVFNAAESLVPEYAQQPEPALTEPAAAPDSSDTHQQAAPARLFATD
TPPELPTGTDYKPEGWDMWAPWLDAGVDPSLQHSVETVRTEPLIPLALPSTEAGVVHLSGTPAPFASSPAELDSSTAVEQ
PAELHSPQAQHAPHETEETAPSPAPLERDPREPRFVAHLPSETETAAEPAEPVVPTHFAAPDDERAPREPRFAFTPAPAV
TEAETASEPGTFARHDTAPPAAAADEPVAQPAVPPVVQPAVPFPAALSDDDRPHFAVTRETRAPQRRGMLGGFFGGLVAA
ALVGLLAAQLAWWQRETLMIYWPVTQGWFRQACAPLGCTVTPPRAIDGLRLDATDLRQLDGPRELELKVPLTNRYRVALA
YPSVELTLLDDTNHVTVRRVLAPRDYVRPGTPIDAGLPPGTTQTMVVRLETNGTPASNFRVQIFYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50446; Mature: 50446

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLATRCPHCETVFRLQQEQLSLHQGLVRCGHCHEVFNAAESLVPEYAQQPEPALTEPAA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
APDSSDTHQQAAPARLFATDTPPELPTGTDYKPEGWDMWAPWLDAGVDPSLQHSVETVRT
CCCCCCCHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHC
EPLIPLALPSTEAGVVHLSGTPAPFASSPAELDSSTAVEQPAELHSPQAQHAPHETEETA
CCCEEEECCCCCCCEEEECCCCCCCCCCCHHCCCCHHHCCCHHHCCCCHHCCCCCCHHCC
PSPAPLERDPREPRFVAHLPSETETAAEPAEPVVPTHFAAPDDERAPREPRFAFTPAPAV
CCCCCCCCCCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
TEAETASEPGTFARHDTAPPAAAADEPVAQPAVPPVVQPAVPFPAALSDDDRPHFAVTRE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
TRAPQRRGMLGGFFGGLVAAALVGLLAAQLAWWQRETLMIYWPVTQGWFRQACAPLGCTV
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCC
TPPRAIDGLRLDATDLRQLDGPRELELKVPLTNRYRVALAYPSVELTLLDDTNHVTVRRV
CCCHHCCCCEECHHHHHHCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCEEEEEE
LAPRDYVRPGTPIDAGLPPGTTQTMVVRLETNGTPASNFRVQIFYP
CCCHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECC
>Mature Secondary Structure
MLLATRCPHCETVFRLQQEQLSLHQGLVRCGHCHEVFNAAESLVPEYAQQPEPALTEPAA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
APDSSDTHQQAAPARLFATDTPPELPTGTDYKPEGWDMWAPWLDAGVDPSLQHSVETVRT
CCCCCCCHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHC
EPLIPLALPSTEAGVVHLSGTPAPFASSPAELDSSTAVEQPAELHSPQAQHAPHETEETA
CCCEEEECCCCCCCEEEECCCCCCCCCCCHHCCCCHHHCCCHHHCCCCHHCCCCCCHHCC
PSPAPLERDPREPRFVAHLPSETETAAEPAEPVVPTHFAAPDDERAPREPRFAFTPAPAV
CCCCCCCCCCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
TEAETASEPGTFARHDTAPPAAAADEPVAQPAVPPVVQPAVPFPAALSDDDRPHFAVTRE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
TRAPQRRGMLGGFFGGLVAAALVGLLAAQLAWWQRETLMIYWPVTQGWFRQACAPLGCTV
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCC
TPPRAIDGLRLDATDLRQLDGPRELELKVPLTNRYRVALAYPSVELTLLDDTNHVTVRRV
CCCHHCCCCEECHHHHHHCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCEEEEEE
LAPRDYVRPGTPIDAGLPPGTTQTMVVRLETNGTPASNFRVQIFYP
CCCHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA