Definition Pseudomonas entomophila L48 chromosome, complete genome.
Accession NC_008027
Length 5,888,780

Click here to switch to the map view.

The map label for this gene is csuD

Identifier: 104782438

GI number:

Start: 3659883

End: 3662225

Strand: Reverse

Name: csuD

Synonym: PSEEN3395

Alternate gene names: NA

Gene position: NA

Preceding gene: 104782439

Following gene: 104782437

Centisome position: NA

GC content: NA

Gene sequence:

>2343_bases
GTGAGCTGGGTGCGGGTGGCAACGCACCGGTTGTGGCTGGGCCTGGCGGTGCTGGGCCCTGGCCTGGGCGTGGCCGACGA
ACTGCCGCCGCCCCCCACCGAGAGTGCCGCCATCACCGATGCGACGCTGTACCTCGACCTGCTGGTGAACCAGGTGGGCA
AGGCTGAGCTGGTACCGGTGCAGCAGCGCGCCGGGCGGTTGTACCTGGACAGCGAGGTGTTGCGCGGCGCCGGGATCAAG
CTGCCGGGCGACCCGCGTGGCGAAGTGGCGCTGGAGGATATCCCCGGTCTGCACAGCGACTATGACAGCCAGAACCAGCG
CCTGCTGCTGCAGGTGCCGCCGGCCTGGCTGCCCGAGCAGCAGCTGGGTGACCGCAGCCTGTACCCGGCCAGCGATGCCC
GCAGCAGCTTTGGAGCATTGTTCAACTACGACGCCTACCTCAACGACACCGACGAAGGCGGCAGCTACCTCGCCGCCTGG
AACGAGCTGCGCCTGTTCGATGACTGGGGCACGTTCTCCACCACCGGGCAGTGGCGCCAGTCGTTCAACGGCGCCCAGGA
CAACGGCCGCCAGGGCTTCCTGCGCTACGACACCACGTTCCGCTACACCGATGACCAGCGTCTGCTCACCTACGAGGTGG
GGGACCTGGTGACCGGCGCGCTGCCCTGGACCACCTCGGTGCGCGTTGGCGGGCTGCAGTTGTCGCGGGACTTCAGTGCC
CGTCCCGACCTGGTCACCTACCCGTTGCCGGCCTTTGCCGGCGAAGCGGCGGTGCCGACCTCGCTGGACCTGTTCATCAA
CGGCTACAAGAGCAGCACCACCGAGTTGCAGCCGGGCCCCTACACGCTGACCAACGTGCCGTTCATCAACGGTGCCGGCG
AGGCGGTGGTGGTGACCACCGACGCCCTCGGCCGGCAGGTGTCCACCACCTTGCCGTTCTATGTCACCAGCAGTCTGCTG
GCCAAGGGACTTTCGGATTTCTCGGTGGCGGCTGGCAGTTTGCGCCGCGACTATGCCGTGCGCGATTTTGGTTATGGCCC
GGGCGTGGCGTCGGCCAGCCTGCGCCACGGTGTCTCCGACTACTTCACCCTGGAAACCCACGCCGAAACCGCCCAGTCGA
TGATGCTCGGCGGCCTGGGCGGCAACCTGCGCCTGGGCAACTTCGGCGTGCTCAACGCGGCGGTGGCGCAGAGCCGATTC
GAGGGCGACACGGGCCAGCAGGTAGCGCTGGGCTACCAGTACAACAGCCGGCGCATCGGCTTCAACTACCAGCGCGTGCA
ACGCCACGGCGACTACGCCGACCTGTCGCTGGTCGACAGCCCCTACACCCGCCTGAGCCAGCGCAGCGAGCAGGCCACCC
TGAGCCTGAACCTGGATCGCTATGGCAGCCTGGGTGCCGGCTACTTCGATGTGCGCGCCGGCGACGGCACGCGTACCCGG
CTGGTCAACCTGAGCTGGAGCAAGCCGCTGTGGGGCAACAGCAGCCTGTACCTGTCGGCCAACCGCGAGGTCGGCGACAG
CCAGTGGGCGGTGCAGGCGCAACTGGTGATCCCCTTCGACCTGCGCGGCACCCTGGCCTTCAGCGCCGAACGCAGCAAGG
ACGGCCAGGATTTGCAGCGGGTCAACTACAGTCGCGCCGTGCCGGTCGGCGGCGGGGTGGGCTACAACCTCGGTTACGCC
ACCGGCGGCAACCGCGATGCCTATCGCCAGGCCGACGTGACCTGGCGCCTGCAGTCGGTGCAGTTGCAGGCCGGGGTCTA
CGGCAGCAGCGGCGAGATGACCCGCTGGGCCGATGCCAGCGGTTCGCTGGTGCTGATGGATGCCGGGCTGTTCGCCGCCA
ACCGCATCGACGACGCTTTCGTGGTGGTCAGCACCAGTGGTTACGCCGACGTGCCGGTGCGCTACGAGAACCAGCAGATC
GGCCGCACCGACCGCAACGGCCACCTGCTGGTGCCGTACAGCAGCGGCTATTACCGGGGCAAGTACGAGATCGACCCGAT
GGAGTTGCCGGCCGATGTGCTGGCGCCGCAGGTGGAGCAGCGCGTGGCCGTGCGCCGGGGCAGCGGCTACTTGCTGGAGT
TCCCGCTCAGGCAGGTACGGGCGGCGAGCCTGGTGCTGGTCGACAGTGACCAGCAGGCACTCAAGCTGGGCAGTCATGTA
CTGCACCAGGAGAGTGGCAGCGAGGCGGTGGTGGGTTGGGACGGGCTGGTGTACCTGGAGAACCTGGCGCCCCATAACCG
CCTGGTCGTGGACAAGGCTGATGGTGGGCAGTGCCAGGTGGCGTTCGACTTACCCGAAGGGGAGGGGCCGATCCCGCTGA
TCGGCCCTTTGGTGTGTCGATGA

Upstream 100 bases:

>100_bases
ATGGCCAGGACGCGGCGCAGGCCATCAAGCAGGGCCAGTGATACGCGGGTGAACGTCTGTCAGGGGCCAGGGAGGACCCG
GCAATGGTTGGACATCGTGT

Downstream 100 bases:

>100_bases
AGGTGCTCAAGGCATTGCTGCTGGGTAGCTTGCTGCTGCCAGACGGTGCCGCCTGGGCGTTGTGTTCGTCGGTGGCCACC
GCCCCGGCGGCCTTTGGCTC

Product: type 1 pili usher protein CsuD

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>780_residues
MSWVRVATHRLWLGLAVLGPGLGVADELPPPPTESAAITDATLYLDLLVNQVGKAELVPVQQRAGRLYLDSEVLRGAGIK
LPGDPRGEVALEDIPGLHSDYDSQNQRLLLQVPPAWLPEQQLGDRSLYPASDARSSFGALFNYDAYLNDTDEGGSYLAAW
NELRLFDDWGTFSTTGQWRQSFNGAQDNGRQGFLRYDTTFRYTDDQRLLTYEVGDLVTGALPWTTSVRVGGLQLSRDFSA
RPDLVTYPLPAFAGEAAVPTSLDLFINGYKSSTTELQPGPYTLTNVPFINGAGEAVVVTTDALGRQVSTTLPFYVTSSLL
AKGLSDFSVAAGSLRRDYAVRDFGYGPGVASASLRHGVSDYFTLETHAETAQSMMLGGLGGNLRLGNFGVLNAAVAQSRF
EGDTGQQVALGYQYNSRRIGFNYQRVQRHGDYADLSLVDSPYTRLSQRSEQATLSLNLDRYGSLGAGYFDVRAGDGTRTR
LVNLSWSKPLWGNSSLYLSANREVGDSQWAVQAQLVIPFDLRGTLAFSAERSKDGQDLQRVNYSRAVPVGGGVGYNLGYA
TGGNRDAYRQADVTWRLQSVQLQAGVYGSSGEMTRWADASGSLVLMDAGLFAANRIDDAFVVVSTSGYADVPVRYENQQI
GRTDRNGHLLVPYSSGYYRGKYEIDPMELPADVLAPQVEQRVAVRRGSGYLLEFPLRQVRAASLVLVDSDQQALKLGSHV
LHQESGSEAVVGWDGLVYLENLAPHNRLVVDKADGGQCQVAFDLPEGEGPIPLIGPLVCR

Sequences:
NA

Specific function: NA

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA