| Definition | Pseudomonas entomophila L48 chromosome, complete genome. |
|---|---|
| Accession | NC_008027 |
| Length | 5,888,780 |
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The map label for this gene is zur [H]
Identifier: 104779385
GI number: 104779385
Start: 68645
End: 69130
Strand: Reverse
Name: zur [H]
Synonym: PSEEN0072
Alternate gene names: 104779385
Gene position: 69130-68645 (Counterclockwise)
Preceding gene: 104779387
Following gene: 104779384
Centisome position: 1.17
GC content: 67.9
Gene sequence:
>486_bases ATGTCCATCACGCCGCTGGCCCACCGCCCCCACGATCATTCCCATTGCGTCCACAGCGCGCTGGCCGAGGCCGACGCGCT GTGCAACCGTCAGGGCCTGCGCCTGACCGCCCTGCGCCGCCGTGTGCTGGAGCTGGTGTGGCAGAGCCACAAGCCGTTGG GCGCCTACGACATCCTCGCCGTGCTCAGCGAGCAGGACGGCCGCCGCGCCGCGCCACCCACCGTCTATCGCGCCCTGGAC TTCCTGCTGGAAAACGGCCTGGTGCACCGCATCGCCTCGCTCAACGCCTTCATCGGCTGCAGCCACCCCGAACACGCGCA CCAGGGCCAGTTCCTGATCTGCCGTGAATGCCACGTGGCCATCGAACTGGAGCAGGACAGCATCAGCAATGCCATCGTCG ACAGCGCCAAGGCTGTCGGCTTCGCCGTCGAAACGCAGACCGTGGAAGTGGTCGGCCTGTGCGGCAACTGCCGGGGCAAG GCATGA
Upstream 100 bases:
>100_bases TGAAAGCGACAAAGAGGACAAGGAATCGGGACACGGTGGATACTCGGGTCGTCAGAAACAGGTAACATAATAACGTCTCC ATCCTGAACCGTCGCTGCCC
Downstream 100 bases:
>100_bases GCGACGCACTGATCCGCCTCGAGCAGGTCGGGGTCAGCTTTGCCGGTGAAGCGGTGCTCGACAGCATCGACCTGGCCGTC GCGCCCGGCCAGATCGTCAC
Product: transcriptional repressor of Zn transport system Zur
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSITPLAHRPHDHSHCVHSALAEADALCNRQGLRLTALRRRVLELVWQSHKPLGAYDILAVLSEQDGRRAAPPTVYRALD FLLENGLVHRIASLNAFIGCSHPEHAHQGQFLICRECHVAIELEQDSISNAIVDSAKAVGFAVETQTVEVVGLCGNCRGK A
Sequences:
>Translated_161_residues MSITPLAHRPHDHSHCVHSALAEADALCNRQGLRLTALRRRVLELVWQSHKPLGAYDILAVLSEQDGRRAAPPTVYRALD FLLENGLVHRIASLNAFIGCSHPEHAHQGQFLICRECHVAIELEQDSISNAIVDSAKAVGFAVETQTVEVVGLCGNCRGK A >Mature_160_residues SITPLAHRPHDHSHCVHSALAEADALCNRQGLRLTALRRRVLELVWQSHKPLGAYDILAVLSEQDGRRAAPPTVYRALDF LLENGLVHRIASLNAFIGCSHPEHAHQGQFLICRECHVAIELEQDSISNAIVDSAKAVGFAVETQTVEVVGLCGNCRGKA
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=138, Percent_Identity=36.9565217391304, Blast_Score=93, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 17599; Mature: 17468
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITPLAHRPHDHSHCVHSALAEADALCNRQGLRLTALRRRVLELVWQSHKPLGAYDILA CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH VLSEQDGRRAAPPTVYRALDFLLENGLVHRIASLNAFIGCSHPEHAHQGQFLICRECHVA HHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECEEE IELEQDSISNAIVDSAKAVGFAVETQTVEVVGLCGNCRGKA EEECHHHHHHHHHHHHHHHEEEEECCEEEEEEECCCCCCCC >Mature Secondary Structure SITPLAHRPHDHSHCVHSALAEADALCNRQGLRLTALRRRVLELVWQSHKPLGAYDILA CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH VLSEQDGRRAAPPTVYRALDFLLENGLVHRIASLNAFIGCSHPEHAHQGQFLICRECHVA HHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECEEE IELEQDSISNAIVDSAKAVGFAVETQTVEVVGLCGNCRGKA EEECHHHHHHHHHHHHHHHEEEEECCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]