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The map label for this gene is 103488495

Identifier: 103488495

GI number: 103488495

Start: 3162330

End: 3163361

Strand: Reverse

Name: 103488495

Synonym: Sala_3018

Alternate gene names: NA

Gene position: 3163361-3162330 (Counterclockwise)

Preceding gene: 103488496

Following gene: 103488493

Centisome position: 94.57

GC content: 70.54

Gene sequence:

>1032_bases
ATGAAGAGCGTCAAGCCCACGGACCTCGAACGCCAGACGCGCCTCGACCCCGCGGTTCGCCTCATCCTGCTCACCGGACC
CGACGAAGCGACGATGGACGCGGTCGCGACCCATCTGGTCGGCCTTGCGGGCAAGGAGGCCGAGCGGCTCGACCTGACGA
ACGGACAACTCGCGCAAGACCCGTCGCTGCTCGCCGTCGAGGCAGCGTCGATGTCGCTCTTCGCGCCCAACCGGCTGATC
CGCGTCGACCTTTCGGGCGGCGGCGACGACAGCCTCGCCGCGGTCGAGGCGCTGCTTGCCGCCGAAACCGCGATCAACCC
GGTGATCGCGACCGGCGCATCGGTCACCGCCAAGTCAAAGCTGGTGAAGCTGGTCGAGGGATCGGATCATGCCGTTGCCG
CCATCTGTTACCAGCCCGACCGCCGCGCGCTCGTCGGCATCGCGATGGCGGCGGCGCAGGACCAGGGGCTTCGCCTCGCC
AATGCCGAGGCGCAATTGCTCGTCGATCTGGTGTCGGGCGATCAGGCGCTGATGCGCCGCGAGATCGAGAAGATCGCGCT
CTATCTCGACGCGGGCGCCGACCGGCAGCGGCAGGTGACCGCCGCCGACATCGCCGCGCTGGGCGCCGCGACGCACGAGG
AGGATGTCAGCGCGTGCATCAACGTCGCGCTGGGGGGCAAGGTGCGCGAGCTGCCCGACATGCTTGCGACCGCCGCCGCG
GTTGGCGTCGCCGAAATCCGCATCATCCGCGCGCTGGCGATCCGCGCGGTGCAGCTCGCGCGGCTGCGCGCCGAGGTCGA
CGGCGGCGCGCACCCCGCGACCGTCGTGTCGGCGCGCAGTAGCGGCGTGTTCTGGAAAGAGCGCGACGCGGTGACGGCGC
AGCTGCACATCTGGGATTCGCTGCGCATCGCGCGCCTGATGAGCCGCCTGCTCGACTGCGAGCGCGCGCTGAAAGCGTCG
GGGACCCCGGGCGCGGTGCTGTTTCGCAAGCTGATGACCGACATCGCGCACCAGGCCGCCCGCGCTCGATAA

Upstream 100 bases:

>100_bases
CTTCGGGGATCGCCGACCAGATCGTCTCGCGGCTTGCCGTCTATGCGAACCGCGGCGGCGGTCAGGGTGCCGCCACCCCC
ACTCCCAGCCCCGCCGGGCA

Downstream 100 bases:

>100_bases
TTCTTCCCCTATTTCGTCATTCCGGCGAAGGCCGGAATCTCGCCCTTGGTGATCAACGCAGCGGCGAGATCCCGGCCTTC
GCCGGGATGACGATCAAAGA

Product: DNA polymerase III, delta subunit

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Subunit Delta

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKSVKPTDLERQTRLDPAVRLILLTGPDEATMDAVATHLVGLAGKEAERLDLTNGQLAQDPSLLAVEAASMSLFAPNRLI
RVDLSGGGDDSLAAVEALLAAETAINPVIATGASVTAKSKLVKLVEGSDHAVAAICYQPDRRALVGIAMAAAQDQGLRLA
NAEAQLLVDLVSGDQALMRREIEKIALYLDAGADRQRQVTAADIAALGAATHEEDVSACINVALGGKVRELPDMLATAAA
VGVAEIRIIRALAIRAVQLARLRAEVDGGAHPATVVSARSSGVFWKERDAVTAQLHIWDSLRIARLMSRLLDCERALKAS
GTPGAVLFRKLMTDIAHQAARAR

Sequences:

>Translated_343_residues
MKSVKPTDLERQTRLDPAVRLILLTGPDEATMDAVATHLVGLAGKEAERLDLTNGQLAQDPSLLAVEAASMSLFAPNRLI
RVDLSGGGDDSLAAVEALLAAETAINPVIATGASVTAKSKLVKLVEGSDHAVAAICYQPDRRALVGIAMAAAQDQGLRLA
NAEAQLLVDLVSGDQALMRREIEKIALYLDAGADRQRQVTAADIAALGAATHEEDVSACINVALGGKVRELPDMLATAAA
VGVAEIRIIRALAIRAVQLARLRAEVDGGAHPATVVSARSSGVFWKERDAVTAQLHIWDSLRIARLMSRLLDCERALKAS
GTPGAVLFRKLMTDIAHQAARAR
>Mature_343_residues
MKSVKPTDLERQTRLDPAVRLILLTGPDEATMDAVATHLVGLAGKEAERLDLTNGQLAQDPSLLAVEAASMSLFAPNRLI
RVDLSGGGDDSLAAVEALLAAETAINPVIATGASVTAKSKLVKLVEGSDHAVAAICYQPDRRALVGIAMAAAQDQGLRLA
NAEAQLLVDLVSGDQALMRREIEKIALYLDAGADRQRQVTAADIAALGAATHEEDVSACINVALGGKVRELPDMLATAAA
VGVAEIRIIRALAIRAVQLARLRAEVDGGAHPATVVSARSSGVFWKERDAVTAQLHIWDSLRIARLMSRLLDCERALKAS
GTPGAVLFRKLMTDIAHQAARAR

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 36140; Mature: 36140

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVKPTDLERQTRLDPAVRLILLTGPDEATMDAVATHLVGLAGKEAERLDLTNGQLAQD
CCCCCCCCCCHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCC
PSLLAVEAASMSLFAPNRLIRVDLSGGGDDSLAAVEALLAAETAINPVIATGASVTAKSK
CCEEEEEECCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHH
LVKLVEGSDHAVAAICYQPDRRALVGIAMAAAQDQGLRLANAEAQLLVDLVSGDQALMRR
HHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEECCHHHEEHHHHCCCHHHHHH
EIEKIALYLDAGADRQRQVTAADIAALGAATHEEDVSACINVALGGKVRELPDMLATAAA
HHHHHEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VGVAEIRIIRALAIRAVQLARLRAEVDGGAHPATVVSARSSGVFWKERDAVTAQLHIWDS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCCCEEEEEEEHHH
LRIARLMSRLLDCERALKASGTPGAVLFRKLMTDIAHQAARAR
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSVKPTDLERQTRLDPAVRLILLTGPDEATMDAVATHLVGLAGKEAERLDLTNGQLAQD
CCCCCCCCCCHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCC
PSLLAVEAASMSLFAPNRLIRVDLSGGGDDSLAAVEALLAAETAINPVIATGASVTAKSK
CCEEEEEECCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHH
LVKLVEGSDHAVAAICYQPDRRALVGIAMAAAQDQGLRLANAEAQLLVDLVSGDQALMRR
HHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEECCHHHEEHHHHCCCHHHHHH
EIEKIALYLDAGADRQRQVTAADIAALGAATHEEDVSACINVALGGKVRELPDMLATAAA
HHHHHEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VGVAEIRIIRALAIRAVQLARLRAEVDGGAHPATVVSARSSGVFWKERDAVTAQLHIWDS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCCCEEEEEEEHHH
LRIARLMSRLLDCERALKASGTPGAVLFRKLMTDIAHQAARAR
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA