| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is 103488494
Identifier: 103488494
GI number: 103488494
Start: 3161717
End: 3162205
Strand: Direct
Name: 103488494
Synonym: Sala_3017
Alternate gene names: NA
Gene position: 3161717-3162205 (Clockwise)
Preceding gene: 103488490
Following gene: 103488499
Centisome position: 94.52
GC content: 71.57
Gene sequence:
>489_bases ATGGACGATGTGCCGCCCCTGCTGATCGCATGGCACAGCCGCACCGGCGGCAGCGAGGCGCTCGCCAGGGCCGCGGCCGA AGGGGCGGGCGGGGCGGCGCTGCGCGTCGCGGCGGCCGATGTCACCCCCGATATGCTGCTCGCGGCGGCGGGCTATCTGT TCGTAGGCCCCGAAAATCTCGCCGCGCTGTCGGGCGCGATGAAGGAGATGTTCGACCGCGCCTATTATCCCTGCCTCGGC CGGATCGAAGGCCGCCCCTACGCGACGATCATCTGCGCAGGATCCGATGGCGAAAATGCGCAGCGCCAGCTCGACCGCAT CGCGACCGGCTGGCGGCTGCGACGCGTCGCCGACCCGGTGATCGTCAACACCGACGCGCAGACGCCCGAGGCCATTCTGG CGCCCAAGACGATCGCGCCGGAGCGCCTCGCCGAAGCGCGCGACCTCGGCGCCGCGCTCGCCGAAGGACTGGCGGCGGGC ATTTTCTGA
Upstream 100 bases:
>100_bases AGGCATCCTGCGATCAACAGGGTCGTCAGTCGGCGCATTTGGTTCCTCCCCCTTTTTCGCGCAGCTTGCGCCGCGCCGCC GCGCTTGGCAAGCAGGGGCG
Downstream 100 bases:
>100_bases TCGCGCGACGATAGCCCCGACTTCTCTTTGATCGTCATCCCGGCGAAGGCCGGGATCTCGCCGCTGCGTTGATCACCAAG GGCGAGATTCCGGCCTTCGC
Product: multimeric flavodoxin WrbA
Products: NA
Alternate protein names: Flavodoxin/Nitric Oxide Synthase; Flavodoxin; NAD(P)H DehydrogenaseNADPH-Dependent FMN Reductase; NAD(P)H Dehydrogenase; NADPH-Dependent FMN Reductase; Flavodoxin-Like Protein; Oxidoreductase; Flavoprotein
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MDDVPPLLIAWHSRTGGSEALARAAAEGAGGAALRVAAADVTPDMLLAAAGYLFVGPENLAALSGAMKEMFDRAYYPCLG RIEGRPYATIICAGSDGENAQRQLDRIATGWRLRRVADPVIVNTDAQTPEAILAPKTIAPERLAEARDLGAALAEGLAAG IF
Sequences:
>Translated_162_residues MDDVPPLLIAWHSRTGGSEALARAAAEGAGGAALRVAAADVTPDMLLAAAGYLFVGPENLAALSGAMKEMFDRAYYPCLG RIEGRPYATIICAGSDGENAQRQLDRIATGWRLRRVADPVIVNTDAQTPEAILAPKTIAPERLAEARDLGAALAEGLAAG IF >Mature_162_residues MDDVPPLLIAWHSRTGGSEALARAAAEGAGGAALRVAAADVTPDMLLAAAGYLFVGPENLAALSGAMKEMFDRAYYPCLG RIEGRPYATIICAGSDGENAQRQLDRIATGWRLRRVADPVIVNTDAQTPEAILAPKTIAPERLAEARDLGAALAEGLAAG IF
Specific function: Unknown
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16872; Mature: 16872
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDVPPLLIAWHSRTGGSEALARAAAEGAGGAALRVAAADVTPDMLLAAAGYLFVGPENL CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCEEEECCHHH AALSGAMKEMFDRAYYPCLGRIEGRPYATIICAGSDGENAQRQLDRIATGWRLRRVADPV HHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCHHHHHHCCCE IVNTDAQTPEAILAPKTIAPERLAEARDLGAALAEGLAAGIF EEECCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDDVPPLLIAWHSRTGGSEALARAAAEGAGGAALRVAAADVTPDMLLAAAGYLFVGPENL CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCEEEECCHHH AALSGAMKEMFDRAYYPCLGRIEGRPYATIICAGSDGENAQRQLDRIATGWRLRRVADPV HHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCHHHHHHCCCE IVNTDAQTPEAILAPKTIAPERLAEARDLGAALAEGLAAGIF EEECCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA