| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488421
Identifier: 103488421
GI number: 103488421
Start: 3087994
End: 3088416
Strand: Direct
Name: 103488421
Synonym: Sala_2944
Alternate gene names: NA
Gene position: 3087994-3088416 (Clockwise)
Preceding gene: 103488420
Following gene: 103488422
Centisome position: 92.31
GC content: 66.19
Gene sequence:
>423_bases ATGCTGCTATCGGGGTCGCAGGCACCGGCAGACCGTGCCGAACGGGTGCTCGACATATTGCGGATCACCGTCGCGCTGCT CATCCTGATCCACGGCGTTTATCGGCTGGCGGCCGATCTCGTCGTTCCCTTCGGCACCTGGCTCGACAGCCTCGGCTTTC CTTATGGCTATGGCTGGGCAATGGCGGTGACGCTTTACGAGCTCGTCGGCCCCGCGCTGATGCTCGCGCGCCGCTGGACC AGCCTCGCCGCGCTCGGCCATGCCTTCATCCTGACCTTGGGCATGTTCCTCGTCCACATGCCCGCGGGCTGGTTCGTCGT CGGCGGCGGGCGCAACGGGATGGAATATAGCGTCTTCCTGATCGTCTCGCTGCTCGCGATCGCCTGGGCCTTTTGGCCGG TGCGCGACGGCGCGGCGCGATAA
Upstream 100 bases:
>100_bases CAAATTATCGACGCGCAACTTCGGTCGCGACCGGCGCTATCCGATCACGCACGGGTTCCGGACGGGATAGGGTTTTCAGG GGAAGAAAGGGAAAAGGACG
Downstream 100 bases:
>100_bases ATATCGCCATCCGGCGGGCAATGCGGTTATAGGCGCGCGCCATGACCGTCACCACCCGCTTCGCTCCCTCGCCGACCGGC CATCTGCACGTCGGAAACGT
Product: DoxX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MLLSGSQAPADRAERVLDILRITVALLILIHGVYRLAADLVVPFGTWLDSLGFPYGYGWAMAVTLYELVGPALMLARRWT SLAALGHAFILTLGMFLVHMPAGWFVVGGGRNGMEYSVFLIVSLLAIAWAFWPVRDGAAR
Sequences:
>Translated_140_residues MLLSGSQAPADRAERVLDILRITVALLILIHGVYRLAADLVVPFGTWLDSLGFPYGYGWAMAVTLYELVGPALMLARRWT SLAALGHAFILTLGMFLVHMPAGWFVVGGGRNGMEYSVFLIVSLLAIAWAFWPVRDGAAR >Mature_140_residues MLLSGSQAPADRAERVLDILRITVALLILIHGVYRLAADLVVPFGTWLDSLGFPYGYGWAMAVTLYELVGPALMLARRWT SLAALGHAFILTLGMFLVHMPAGWFVVGGGRNGMEYSVFLIVSLLAIAWAFWPVRDGAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15291; Mature: 15291
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSGSQAPADRAERVLDILRITVALLILIHGVYRLAADLVVPFGTWLDSLGFPYGYGWA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH MAVTLYELVGPALMLARRWTSLAALGHAFILTLGMFLVHMPAGWFVVGGGRNGMEYSVFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHH IVSLLAIAWAFWPVRDGAAR HHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLLSGSQAPADRAERVLDILRITVALLILIHGVYRLAADLVVPFGTWLDSLGFPYGYGWA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH MAVTLYELVGPALMLARRWTSLAALGHAFILTLGMFLVHMPAGWFVVGGGRNGMEYSVFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHH IVSLLAIAWAFWPVRDGAAR HHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA