Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is flgL [H]

Identifier: 103488394

GI number: 103488394

Start: 3064644

End: 3065474

Strand: Direct

Name: flgL [H]

Synonym: Sala_2917

Alternate gene names: 103488394

Gene position: 3064644-3065474 (Clockwise)

Preceding gene: 103488393

Following gene: 103488395

Centisome position: 91.61

GC content: 67.39

Gene sequence:

>831_bases
ATGATCAACGCCGTAGGCAATCGCATGACGCGCGAAATCGCGCGCCAGCAAAGCCTCGCCGAACAGCTCGAGCGGACGCA
GATCCAGATTTCGGGCGGCAAGAAACTGCTGCGCATGTCCGACGATCCGGTCGCCGCGCGGCGGATCGCGACGATCGGCA
CGACGCAGGCGAGCATGACCGCCTGGTCGGCGAACGTCAATTCGGCCGCCGCGCTCGTGTCGCAGGCCGATGGCGTCATG
AAGGCGGTCAGCAATCTGATGACACGCGCGCGTGAACTGACGCTCGCCGCGGTCAGCGATTCGACGAACCCGGCGGATCG
TGCAACGATCGCTGCCGAACTCACCACGATTGCCGATGAACTCGATGCGCTCGCCGCGACGCGCGATTCGAATGGCGAGC
CGCTGTTTGCGGCGGGTCCCGCGCGCGTGATGCGGTTCGACGCGGACCTCAGCTTTGCACCGGTGCCTTCGGCCGCCGAT
ATATTCGTCATCGCCGGCAACAGCCTGTCGACGGGCATCCGCGACGCGGCAACCGCGGTTGCCGCGGGTGACACCGCCGC
GATGAACCTGTCGCTCGGCGCGCTGGCGGCCTCGATCAGCCATGTCGCTGACCAGCATGCCCGGATCGGCCTGGCGGGCG
GGCGCCTCGACCGCATCGGCGACGGGCTCGCGGCGCGCGGGATCGCGCTGACCGACGAACGCTCGGTGGTCGAGGACACC
GACCTCACCGTCGCGATCGCGCAGCTCAATGCGCAGGAACTGACGCTCAACGCCGCGCAGGCGGCCTTTGCCAAGATCAA
CCGGCAGACCTTGTTCGATCTTTTGCGCTGA

Upstream 100 bases:

>100_bases
GCGCTATCAGCAGGCCTATTCGGCCGCCGCGCGCACCATTCAGGTCGCGCGCGAAACAATGCAAACGCTTCTGAGTTCGC
TCTAAGGGAAGGTCGAAACC

Downstream 100 bases:

>100_bases
GTGCGCTCAAGATCGCGGTCGCGCTGCCGTTAAACATCAAGACGTCCTTTGGATTTGCGGGCGACCGGCCCTGACCGGCG
CCCGATTGGAGTGGCCTGCG

Product: flagellin-like protein

Products: NA

Alternate protein names: HAP3 [H]

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MINAVGNRMTREIARQQSLAEQLERTQIQISGGKKLLRMSDDPVAARRIATIGTTQASMTAWSANVNSAAALVSQADGVM
KAVSNLMTRARELTLAAVSDSTNPADRATIAAELTTIADELDALAATRDSNGEPLFAAGPARVMRFDADLSFAPVPSAAD
IFVIAGNSLSTGIRDAATAVAAGDTAAMNLSLGALAASISHVADQHARIGLAGGRLDRIGDGLAARGIALTDERSVVEDT
DLTVAIAQLNAQELTLNAAQAAFAKINRQTLFDLLR

Sequences:

>Translated_276_residues
MINAVGNRMTREIARQQSLAEQLERTQIQISGGKKLLRMSDDPVAARRIATIGTTQASMTAWSANVNSAAALVSQADGVM
KAVSNLMTRARELTLAAVSDSTNPADRATIAAELTTIADELDALAATRDSNGEPLFAAGPARVMRFDADLSFAPVPSAAD
IFVIAGNSLSTGIRDAATAVAAGDTAAMNLSLGALAASISHVADQHARIGLAGGRLDRIGDGLAARGIALTDERSVVEDT
DLTVAIAQLNAQELTLNAAQAAFAKINRQTLFDLLR
>Mature_276_residues
MINAVGNRMTREIARQQSLAEQLERTQIQISGGKKLLRMSDDPVAARRIATIGTTQASMTAWSANVNSAAALVSQADGVM
KAVSNLMTRARELTLAAVSDSTNPADRATIAAELTTIADELDALAATRDSNGEPLFAAGPARVMRFDADLSFAPVPSAAD
IFVIAGNSLSTGIRDAATAVAAGDTAAMNLSLGALAASISHVADQHARIGLAGGRLDRIGDGLAARGIALTDERSVVEDT
DLTVAIAQLNAQELTLNAAQAAFAKINRQTLFDLLR

Specific function: Unknown

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013384
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 28665; Mature: 28665

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINAVGNRMTREIARQQSLAEQLERTQIQISGGKKLLRMSDDPVAARRIATIGTTQASMT
CCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEECCCCHHHHHHHHHCCCHHHHE
AWSANVNSAAALVSQADGVMKAVSNLMTRARELTLAAVSDSTNPADRATIAAELTTIADE
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHH
LDALAATRDSNGEPLFAAGPARVMRFDADLSFAPVPSAADIFVIAGNSLSTGIRDAATAV
HHHHHHCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHH
AAGDTAAMNLSLGALAASISHVADQHARIGLAGGRLDRIGDGLAARGIALTDERSVVEDT
HCCCCCEEEEHHHHHHHHHHHHHHHHHEEEECCCCHHHHCCCHHHCCEEECCCCCCCCCC
DLTVAIAQLNAQELTLNAAQAAFAKINRQTLFDLLR
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MINAVGNRMTREIARQQSLAEQLERTQIQISGGKKLLRMSDDPVAARRIATIGTTQASMT
CCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEECCCCHHHHHHHHHCCCHHHHE
AWSANVNSAAALVSQADGVMKAVSNLMTRARELTLAAVSDSTNPADRATIAAELTTIADE
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHH
LDALAATRDSNGEPLFAAGPARVMRFDADLSFAPVPSAADIFVIAGNSLSTGIRDAATAV
HHHHHHCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHH
AAGDTAAMNLSLGALAASISHVADQHARIGLAGGRLDRIGDGLAARGIALTDERSVVEDT
HCCCCCEEEEHHHHHHHHHHHHHHHHHEEEECCCCHHHHCCCHHHCCEEECCCCCCCCCC
DLTVAIAQLNAQELTLNAAQAAFAKINRQTLFDLLR
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]