Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is flgG [H]

Identifier: 103488387

GI number: 103488387

Start: 3058824

End: 3059651

Strand: Direct

Name: flgG [H]

Synonym: Sala_2910

Alternate gene names: 103488387

Gene position: 3058824-3059651 (Clockwise)

Preceding gene: 103488386

Following gene: 103488388

Centisome position: 91.44

GC content: 65.46

Gene sequence:

>828_bases
ATGTCATTCTATACGTCGCTTTCGGGCCTCAAGGCATCGCAGACCGACATGTCGGTCATCTCGAACAATATCGCCAACGC
CGGCGCGGTCGGCTTCAAGCGGAGCAAGGCGCAGTTCGGCGACATTTTCGCCTCGTCGCCGACGCAGTCGACGAAGATGA
TCGCTGGCCAGGGCACGCGCCTCAATGGCATCACCCAGCAGTTCACGCAGGGCTCGTATGAATCGAGCGAAAAGACGCTC
GACCTCGCGATCGTCGGCGAGGGTCTGTTCATCGTCAAGGGCGAGCCGCCGCGCGAACAGGTCAGCTATACGCGCAACGG
TTCGTTCGAACCGACCCCCGACGGCTATGTCATCGACACGACGGGGGCGCGGCTGCAGCTGCTTCCCGTCGATGCCGTCG
GCAATGTCACCGACAACACGCTCGCCGGCGCCTTTGATTTCCAGCTGCCCACCGGCGCGCCGTCGGACCCGGCTTCGGCG
CTGGTGAACGTCACCATCGGCCTCGACGGCCTCGTCACCGCGACCTTTGCCAATGGCGAGGACCAGATGCTCGGCAAGGT
GGCGATGGCGACTTTCCCCACCATGTCGGGCCTGCGTCCGACGGGCGACGCGCACTGGCAGTCGACGGGCGAAAGCGGCC
CCCCGACGATCGACGCGGCGACCAACGGGCCGATGGGCGCGATCCGATCGGGCGCGCTCGAACGCTCGAACGTCGACATC
ACCGAGGAGCTGGTGATGCTGATGGCGGCGCAGCGCAATTTCCAGGCGAATGCCAAGGCGATCGAGGGCGCGTCGCAGCT
GACCCAGACGATCATCGGCCTGCGCTGA

Upstream 100 bases:

>100_bases
GCCCAGATTTCGGAGCAGCTCGCGGCGCAGACGCAGCTGCTTCGGGACATCAAGGCCGCCACCCCGGCGCCCGCCCCCAC
CACCCAGGAAGGATAAGCCC

Downstream 100 bases:

>100_bases
ACCATCGCTGACCACCGCTTCCCGGGAGCCAATCCATGGACCGCCTCATCTACACCAGCCTCTCCGCGATGCGCGGCAGC
ATGGCGCGGCAGACGGCGAT

Product: protein of unknown function DUF1078-like protein

Products: NA

Alternate protein names: Distal rod protein [H]

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MSFYTSLSGLKASQTDMSVISNNIANAGAVGFKRSKAQFGDIFASSPTQSTKMIAGQGTRLNGITQQFTQGSYESSEKTL
DLAIVGEGLFIVKGEPPREQVSYTRNGSFEPTPDGYVIDTTGARLQLLPVDAVGNVTDNTLAGAFDFQLPTGAPSDPASA
LVNVTIGLDGLVTATFANGEDQMLGKVAMATFPTMSGLRPTGDAHWQSTGESGPPTIDAATNGPMGAIRSGALERSNVDI
TEELVMLMAAQRNFQANAKAIEGASQLTQTIIGLR

Sequences:

>Translated_275_residues
MSFYTSLSGLKASQTDMSVISNNIANAGAVGFKRSKAQFGDIFASSPTQSTKMIAGQGTRLNGITQQFTQGSYESSEKTL
DLAIVGEGLFIVKGEPPREQVSYTRNGSFEPTPDGYVIDTTGARLQLLPVDAVGNVTDNTLAGAFDFQLPTGAPSDPASA
LVNVTIGLDGLVTATFANGEDQMLGKVAMATFPTMSGLRPTGDAHWQSTGESGPPTIDAATNGPMGAIRSGALERSNVDI
TEELVMLMAAQRNFQANAKAIEGASQLTQTIIGLR
>Mature_274_residues
SFYTSLSGLKASQTDMSVISNNIANAGAVGFKRSKAQFGDIFASSPTQSTKMIAGQGTRLNGITQQFTQGSYESSEKTLD
LAIVGEGLFIVKGEPPREQVSYTRNGSFEPTPDGYVIDTTGARLQLLPVDAVGNVTDNTLAGAFDFQLPTGAPSDPASAL
VNVTIGLDGLVTATFANGEDQMLGKVAMATFPTMSGLRPTGDAHWQSTGESGPPTIDAATNGPMGAIRSGALERSNVDIT
EELVMLMAAQRNFQANAKAIEGASQLTQTIIGLR

Specific function: Unknown

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=287, Percent_Identity=32.0557491289199, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1787316, Length=115, Percent_Identity=40, Blast_Score=94, Evalue=7e-21,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012834 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 28719; Mature: 28588

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFYTSLSGLKASQTDMSVISNNIANAGAVGFKRSKAQFGDIFASSPTQSTKMIAGQGTR
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEECCCCC
LNGITQQFTQGSYESSEKTLDLAIVGEGLFIVKGEPPREQVSYTRNGSFEPTPDGYVIDT
CCHHHHHHHCCCCCCCCCEEEEEEEECCEEEEECCCCHHHHCCCCCCCCCCCCCCEEEEC
TGARLQLLPVDAVGNVTDNTLAGAFDFQLPTGAPSDPASALVNVTIGLDGLVTATFANGE
CCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCC
DQMLGKVAMATFPTMSGLRPTGDAHWQSTGESGPPTIDAATNGPMGAIRSGALERSNVDI
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHCCCCCCCCCH
TEELVMLMAAQRNFQANAKAIEGASQLTQTIIGLR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFYTSLSGLKASQTDMSVISNNIANAGAVGFKRSKAQFGDIFASSPTQSTKMIAGQGTR
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEECCCCC
LNGITQQFTQGSYESSEKTLDLAIVGEGLFIVKGEPPREQVSYTRNGSFEPTPDGYVIDT
CCHHHHHHHCCCCCCCCCEEEEEEEECCEEEEECCCCHHHHCCCCCCCCCCCCCCEEEEC
TGARLQLLPVDAVGNVTDNTLAGAFDFQLPTGAPSDPASALVNVTIGLDGLVTATFANGE
CCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCC
DQMLGKVAMATFPTMSGLRPTGDAHWQSTGESGPPTIDAATNGPMGAIRSGALERSNVDI
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHCCCCCCCCCH
TEELVMLMAAQRNFQANAKAIEGASQLTQTIIGLR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]