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The map label for this gene is flgC [H]

Identifier: 103488385

GI number: 103488385

Start: 3057712

End: 3058515

Strand: Direct

Name: flgC [H]

Synonym: Sala_2908

Alternate gene names: 103488385

Gene position: 3057712-3058515 (Clockwise)

Preceding gene: 103488378

Following gene: 103488386

Centisome position: 91.41

GC content: 64.55

Gene sequence:

>804_bases
ATGTCCGCGCCAGTCGGCCGGACCGCGGCAAGCGTAAGGCAAGCGAAGGAATGTGGTGATGGCATCCGAGAAACTCTTTG
GCCTGCACGCGACGGCGCTCCAGTTGCGCAGCCAGCGCATGATGATGCTCGCGTCGAACATCGCGAACGCCGCGACGCCC
GGTTACAAGGCGCGCGACCTCGACTTCGCCAAGGCGCTCGACCTCGCGCAGCAGGGTCGGTCGACGGAGCAGGCGATTGC
CTATCGCGTGCCGGTGCAGGCTTCGCTCGACGGCAACACCGTCGAAATGGCGACCGAGCAGACCGCCTATGCCGAAAATG
CGCTCGCCTATCGGTCGAGCCTCGCCTTTCTGAGCGGCCGCATCAACACGCTGTCGCGCGCGCTGAAAGGCGAATAACGA
TGAACGGCAGCTTTTCCGTCTTCGACATCAGCGGCCGCGCCATGTCGGCACAGCTGGTGCGGCTCAACACCACCGCGTCG
AACCTCGCCAATGCGGGGACGGTCGCGGGCAGCGAGGCGGGCGCCTTCCGCTCGCTCAAGCCCGTCTTTCGCACGGTGAT
GGACGATCATGGCCGCGCGACGGTGCAGATCGACCAGATCACGACCTCGAAAATGGCGCCGTCGAAGCGCCACGATCCGT
CGAACCCGCTCGCCGACGCCGACGGCAATGTCTGGGAAGCCGCGGTCGATAGCGCCGCCGAACTGGTCGAGATGGTCGAA
ACCGCGCGCCAGTATCAGAACAATGTCCAGGTCCTCGAAACCGCGAAAGGCCTGATCAACGAAACCCTGAGGATGGGACA
GTAA

Upstream 100 bases:

>100_bases
GATGCCCCCGACGGAACCGCATGAACGATTTCAAATATCGGAAAAACATAGAAAAAATGGATTTGGCACAGCCATTGCAT
TCTCCCTTGGGTGTTTCCGT

Downstream 100 bases:

>100_bases
GATGAGCATCAACGGTATCAGCAACAACAACCCCGTGTTCCATTCGCCGGGCACCAGCCAGCAGATGGGTCAGAGCGATT
TCCTGCGTCTGATGACCGCG

Product: flagellar basal-body rod protein FlgC

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSAPVGRTAASVRQAKECGDGIRETLWPARDGAPVAQPAHDDARVEHRERRDARLQGARPRLRQGARPRAAGSVDGAGDC
LSRAGAGFARRQHRRNGDRADRLCRKCARLSVEPRLSERPHQHAVARAERRITMNGSFSVFDISGRAMSAQLVRLNTTAS
NLANAGTVAGSEAGAFRSLKPVFRTVMDDHGRATVQIDQITTSKMAPSKRHDPSNPLADADGNVWEAAVDSAAELVEMVE
TARQYQNNVQVLETAKGLINETLRMGQ

Sequences:

>Translated_267_residues
MSAPVGRTAASVRQAKECGDGIRETLWPARDGAPVAQPAHDDARVEHRERRDARLQGARPRLRQGARPRAAGSVDGAGDC
LSRAGAGFARRQHRRNGDRADRLCRKCARLSVEPRLSERPHQHAVARAERRITMNGSFSVFDISGRAMSAQLVRLNTTAS
NLANAGTVAGSEAGAFRSLKPVFRTVMDDHGRATVQIDQITTSKMAPSKRHDPSNPLADADGNVWEAAVDSAAELVEMVE
TARQYQNNVQVLETAKGLINETLRMGQ
>Mature_266_residues
SAPVGRTAASVRQAKECGDGIRETLWPARDGAPVAQPAHDDARVEHRERRDARLQGARPRLRQGARPRAAGSVDGAGDCL
SRAGAGFARRQHRRNGDRADRLCRKCARLSVEPRLSERPHQHAVARAERRITMNGSFSVFDISGRAMSAQLVRLNTTASN
LANAGTVAGSEAGAFRSLKPVFRTVMDDHGRATVQIDQITTSKMAPSKRHDPSNPLADADGNVWEAAVDSAAELVEMVET
ARQYQNNVQVLETAKGLINETLRMGQ

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=133, Percent_Identity=42.8571428571429, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 28989; Mature: 28858

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPVGRTAASVRQAKECGDGIRETLWPARDGAPVAQPAHDDARVEHRERRDARLQGARP
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH
RLRQGARPRAAGSVDGAGDCLSRAGAGFARRQHRRNGDRADRLCRKCARLSVEPRLSERP
HHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHCCC
HQHAVARAERRITMNGSFSVFDISGRAMSAQLVRLNTTASNLANAGTVAGSEAGAFRSLK
HHHHHHHHHHEEEECCCEEEEEECCCCCEEEEEEEECCHHHHHCCCCCCCCCCCHHHHHH
PVFRTVMDDHGRATVQIDQITTSKMAPSKRHDPSNPLADADGNVWEAAVDSAAELVEMVE
HHHHHHHHCCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
TARQYQNNVQVLETAKGLINETLRMGQ
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAPVGRTAASVRQAKECGDGIRETLWPARDGAPVAQPAHDDARVEHRERRDARLQGARP
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH
RLRQGARPRAAGSVDGAGDCLSRAGAGFARRQHRRNGDRADRLCRKCARLSVEPRLSERP
HHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHCCC
HQHAVARAERRITMNGSFSVFDISGRAMSAQLVRLNTTASNLANAGTVAGSEAGAFRSLK
HHHHHHHHHHEEEECCCEEEEEECCCCCEEEEEEEECCHHHHHCCCCCCCCCCCHHHHHH
PVFRTVMDDHGRATVQIDQITTSKMAPSKRHDPSNPLADADGNVWEAAVDSAAELVEMVE
HHHHHHHHCCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
TARQYQNNVQVLETAKGLINETLRMGQ
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]