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The map label for this gene is frc [H]

Identifier: 103488372

GI number: 103488372

Start: 3046054

End: 3047256

Strand: Direct

Name: frc [H]

Synonym: Sala_2895

Alternate gene names: 103488372

Gene position: 3046054-3047256 (Clockwise)

Preceding gene: 103488370

Following gene: 103488373

Centisome position: 91.06

GC content: 68.16

Gene sequence:

>1203_bases
ATGTACGACCTGCTGGCCGACCTGTCGGTGATCGAAGCCTCGTCCTTTGTCGCCTCGCCGACCGCCGGGCTTTACTGCGC
CCAGATGGGGGCCGAGGTGATCCGCGTCGACCAGATCGGCGGCGGTCCCGATTTCCGGCGATGGCCGGTCACGGCGAACA
ATGATTCGCTCTATTGGGAAAATCTGAACCGCGCGAAAAAATCGGTCGCGCTCGACCTCGGCCGGGCGGAGGGGCGCGAG
CTTTTGCAGGCGCTGGTGCGCGCGACGGGGCAGTTCGTCACCAATTTCCCGGTCGGCGGGTTCCTTTCGCACGAGACGCT
GGCGGAGGGCCGCGCCGACCTGATCACCGTGCGCGTGATGGGGTGGGCCGACGGGTCGCCCGCGCTCGACTATACGGTGA
ACAATGCGGTGGGGTATCCGATGCTGACCGGCGCGGGCCCAGAACCGGTCAATCATGTGCTGCCCGCATGGGACTTGCTC
ACCGGCGCCTATGCGGCCTTCGCGTTGCTCGCGGCGATCCAGCGGCGCAGCGTCAGCGGGGAGGGCGGCGAAGTGCGCCT
GCCGCTGTCCGATGTCGCGATCGGCACGGTCGCCAATCTCGGCGGGGTGGCCGAGATGCTCTATACGGGCGAAAACCGGC
CGCGGCTCGGCAATGCGGTTTACGGCCTGTTCGGGCGCGATTTCGTGACGCGCGACGGACGGCGGACGATGATCGTCGTC
GTGACGCCGCGGCAATGGTCGAACCTCGTCGCCGCGCTGGAACTCGGCGACGCCATCGCGGCGGTCGAGGCGGCGCGCGG
GGTTTCCTTCGCCACCGACGACGGGCTCCGCTTCACGCACCGCGATGCGCTCTATTCGCTGTTCGAGGCTGCGATCGCGG
CGCGCGACCACGCCGACCTTGCCGCCGCCTTCGACGCGGGCGGGATCGTCCATTCGCCCTATCGCACCATGTATGAGGCG
GTGCAGGATCCCGCGCTGGTCGCCGACAATCCGATCTTTGGCGCCGCCGACAACCCCAGCGGTTTCGCCTATCCCGCCGC
GGGCGCCTTTGCGACGCTGCCGTATGCGACACGCCAGCCGCCCGCCAGCGCGCCGCGCAATGGCGAGCATAGCGAGGAAA
TATTGACCGACCGCCTGTCGCTGTCGTCGGGCGAGCTTGCCCGCCTGATCGACGCCGGTATCGTCGGTGTTGCTTCAGAA
TGA

Upstream 100 bases:

>100_bases
CCCTCCGAAGGCGAAGGCCACAGGTTCGAATCCTGTCGGGTGCGCCAGATGGCTGGTGAGCGGCAATTGGCGCCGCAACG
TCGGGGGAGACGGGGGCCGG

Downstream 100 bases:

>100_bases
CGAGATCCAAACCCCGTTCGCGTCGAGCGTGGTCGAGACGCCCCTCGGTCCAGCGCGGCGTCTCGACTTCGACCTTCGGT
CGAAGTTTATCCTGAGCGCC

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MYDLLADLSVIEASSFVASPTAGLYCAQMGAEVIRVDQIGGGPDFRRWPVTANNDSLYWENLNRAKKSVALDLGRAEGRE
LLQALVRATGQFVTNFPVGGFLSHETLAEGRADLITVRVMGWADGSPALDYTVNNAVGYPMLTGAGPEPVNHVLPAWDLL
TGAYAAFALLAAIQRRSVSGEGGEVRLPLSDVAIGTVANLGGVAEMLYTGENRPRLGNAVYGLFGRDFVTRDGRRTMIVV
VTPRQWSNLVAALELGDAIAAVEAARGVSFATDDGLRFTHRDALYSLFEAAIAARDHADLAAAFDAGGIVHSPYRTMYEA
VQDPALVADNPIFGAADNPSGFAYPAAGAFATLPYATRQPPASAPRNGEHSEEILTDRLSLSSGELARLIDAGIVGVASE

Sequences:

>Translated_400_residues
MYDLLADLSVIEASSFVASPTAGLYCAQMGAEVIRVDQIGGGPDFRRWPVTANNDSLYWENLNRAKKSVALDLGRAEGRE
LLQALVRATGQFVTNFPVGGFLSHETLAEGRADLITVRVMGWADGSPALDYTVNNAVGYPMLTGAGPEPVNHVLPAWDLL
TGAYAAFALLAAIQRRSVSGEGGEVRLPLSDVAIGTVANLGGVAEMLYTGENRPRLGNAVYGLFGRDFVTRDGRRTMIVV
VTPRQWSNLVAALELGDAIAAVEAARGVSFATDDGLRFTHRDALYSLFEAAIAARDHADLAAAFDAGGIVHSPYRTMYEA
VQDPALVADNPIFGAADNPSGFAYPAAGAFATLPYATRQPPASAPRNGEHSEEILTDRLSLSSGELARLIDAGIVGVASE
>Mature_400_residues
MYDLLADLSVIEASSFVASPTAGLYCAQMGAEVIRVDQIGGGPDFRRWPVTANNDSLYWENLNRAKKSVALDLGRAEGRE
LLQALVRATGQFVTNFPVGGFLSHETLAEGRADLITVRVMGWADGSPALDYTVNNAVGYPMLTGAGPEPVNHVLPAWDLL
TGAYAAFALLAAIQRRSVSGEGGEVRLPLSDVAIGTVANLGGVAEMLYTGENRPRLGNAVYGLFGRDFVTRDGRRTMIVV
VTPRQWSNLVAALELGDAIAAVEAARGVSFATDDGLRFTHRDALYSLFEAAIAARDHADLAAAFDAGGIVHSPYRTMYEA
VQDPALVADNPIFGAADNPSGFAYPAAGAFATLPYATRQPPASAPRNGEHSEEILTDRLSLSSGELARLIDAGIVGVASE

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=418, Percent_Identity=23.6842105263158, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI300863124, Length=439, Percent_Identity=22.7790432801822, Blast_Score=84, Evalue=2e-16,
Organism=Escherichia coli, GI87082093, Length=339, Percent_Identity=24.7787610619469, Blast_Score=76, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24648431, Length=405, Percent_Identity=24.4444444444444, Blast_Score=97, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 42310; Mature: 42310

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDLLADLSVIEASSFVASPTAGLYCAQMGAEVIRVDQIGGGPDFRRWPVTANNDSLYWE
CCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCEECCCCCEEHH
NLNRAKKSVALDLGRAEGRELLQALVRATGQFVTNFPVGGFLSHETLAEGRADLITVRVM
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHCCCCEEEEEEEE
GWADGSPALDYTVNNAVGYPMLTGAGPEPVNHVLPAWDLLTGAYAAFALLAAIQRRSVSG
EECCCCCCEEEEECCCCCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
EGGEVRLPLSDVAIGTVANLGGVAEMLYTGENRPRLGNAVYGLFGRDFVTRDGRRTMIVV
CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHCCCCCEEEEEE
VTPRQWSNLVAALELGDAIAAVEAARGVSFATDDGLRFTHRDALYSLFEAAIAARDHADL
ECCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEHHHHHHHHHHHHHHHHCCCHHH
AAAFDAGGIVHSPYRTMYEAVQDPALVADNPIFGAADNPSGFAYPAAGAFATLPYATRQP
HHHHCCCCCEECHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC
PASAPRNGEHSEEILTDRLSLSSGELARLIDAGIVGVASE
CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCEEECCC
>Mature Secondary Structure
MYDLLADLSVIEASSFVASPTAGLYCAQMGAEVIRVDQIGGGPDFRRWPVTANNDSLYWE
CCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCEECCCCCEEHH
NLNRAKKSVALDLGRAEGRELLQALVRATGQFVTNFPVGGFLSHETLAEGRADLITVRVM
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHCCCCEEEEEEEE
GWADGSPALDYTVNNAVGYPMLTGAGPEPVNHVLPAWDLLTGAYAAFALLAAIQRRSVSG
EECCCCCCEEEEECCCCCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
EGGEVRLPLSDVAIGTVANLGGVAEMLYTGENRPRLGNAVYGLFGRDFVTRDGRRTMIVV
CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHCCCCCEEEEEE
VTPRQWSNLVAALELGDAIAAVEAARGVSFATDDGLRFTHRDALYSLFEAAIAARDHADL
ECCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEHHHHHHHHHHHHHHHHCCCHHH
AAAFDAGGIVHSPYRTMYEAVQDPALVADNPIFGAADNPSGFAYPAAGAFATLPYATRQP
HHHHCCCCCEECHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC
PASAPRNGEHSEEILTDRLSLSSGELARLIDAGIVGVASE
CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA