| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is hisC
Identifier: 103488364
GI number: 103488364
Start: 3038668
End: 3039783
Strand: Direct
Name: hisC
Synonym: Sala_2887
Alternate gene names: 103488364
Gene position: 3038668-3039783 (Clockwise)
Preceding gene: 103488361
Following gene: 103488365
Centisome position: 90.84
GC content: 67.65
Gene sequence:
>1116_bases ATGACCGACGCGACCCCCACCCTGACGCCCAAGCCGTGGATCAGCGGCATCGCCCCCTATGTGCCCGGCAAGTCGGCGGG CGCCGACGGCCGCCCGCTCATCAAGCTGAGCGCGAACGAAAATCCGCTCGGCACGGGGGAGAAGGCGCGCGCGGCCTTTG CCGCGGTGCAGTCGGCGCCCGACGCGCTGTCGCGCTATCCCGATCCGGGGTCGGTCGAATTGCGCGCGGCGATCGCCGCC AAATATGGGCTCGACCCCGACCGGGTGATCTGCGGCAACGGCTCGGACGAACTGTTGCACCTCGCCGCCGGGACCTATGC CGGGCCGGGCGACGAGATTCTTTATGTCCGCTATGGCTTTGCGGTCTATGAAATCGCCGCGCGGCGCGTCGGCGCAGTGC CGGTCGAGGCCGACGACCGTGATTTTGCAACCGATGTCGATGCGTTGCTCGCCGCGGTGACCGACAGAACGCGCGTCGTC TATCTCGCCAATCCGAACAATCCGACGGGGACGCTCGCGACGCGCGAAGAAGTTGGGCGGCTTTACGCCGGGTTGCCCCA AAATGTGCTGTTCGTGATCGACCAGGCCTATGCCGAATATCTGACGCCGGACGAAGACGACGGCGGGCTGGAGCTGGCAA AGACCCGGCCCAATGTCTTTGTCACGCGCACCTTCTCCAAAATCCACGGGCTTGCTGCCGAGCGCATCGGTTGGGGTTAT GCGAGTGCCGATGTGATTGCGGCGCTGCACCGCATCCGCCTGCCGTTCAACGTCACCCGCGCCGGGCAGGCGGCGGCGGT CGCGGCGCTCGGCGACGATGATTTCGTGAACCGCAGCCGCGCGCATAATGCCCGCTGGCGCGCCTGGCTGGCGGCGGAAC TGGAGAGCCTGGGCAATCATGGCGTGCGCGTCGTCCCGTCGGCGACCAATTTCCTGCTCGTGCTGTTCGAGGGCGCGGTG AGCGCCGAGACCGTCTATCACCGGCTGATGGACGCGGGCTATATCGTCCGCTGGCTCCCCGGACAGGGGATTCCGCAGGC GCTGCGCATGACGATCGGCACCGAGGACGAGACGCGCGGGCTTGCGACGGCAATCCGCGCCGCGCTCGCCGGTTGA
Upstream 100 bases:
>100_bases CTCCGCCTGAGCCTTTTCCGTTCCTCTTCGCACTCCGCGCCTCTACGCGAATCCCATCAACAAACTGGACTTGGCGGCCT TAGCCGTTAAACGCCCCCGC
Downstream 100 bases:
>100_bases TGGCGATCGGGCGCGTCGCGATCGTCGGGCTGGGCCTGATCGGCTCGTCGGTCGCGCGCGCGGTGAAGGCGCGGCTGCCC GGCGTCGCGGTGGCGGGTTA
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MTDATPTLTPKPWISGIAPYVPGKSAGADGRPLIKLSANENPLGTGEKARAAFAAVQSAPDALSRYPDPGSVELRAAIAA KYGLDPDRVICGNGSDELLHLAAGTYAGPGDEILYVRYGFAVYEIAARRVGAVPVEADDRDFATDVDALLAAVTDRTRVV YLANPNNPTGTLATREEVGRLYAGLPQNVLFVIDQAYAEYLTPDEDDGGLELAKTRPNVFVTRTFSKIHGLAAERIGWGY ASADVIAALHRIRLPFNVTRAGQAAAVAALGDDDFVNRSRAHNARWRAWLAAELESLGNHGVRVVPSATNFLLVLFEGAV SAETVYHRLMDAGYIVRWLPGQGIPQALRMTIGTEDETRGLATAIRAALAG
Sequences:
>Translated_371_residues MTDATPTLTPKPWISGIAPYVPGKSAGADGRPLIKLSANENPLGTGEKARAAFAAVQSAPDALSRYPDPGSVELRAAIAA KYGLDPDRVICGNGSDELLHLAAGTYAGPGDEILYVRYGFAVYEIAARRVGAVPVEADDRDFATDVDALLAAVTDRTRVV YLANPNNPTGTLATREEVGRLYAGLPQNVLFVIDQAYAEYLTPDEDDGGLELAKTRPNVFVTRTFSKIHGLAAERIGWGY ASADVIAALHRIRLPFNVTRAGQAAAVAALGDDDFVNRSRAHNARWRAWLAAELESLGNHGVRVVPSATNFLLVLFEGAV SAETVYHRLMDAGYIVRWLPGQGIPQALRMTIGTEDETRGLATAIRAALAG >Mature_370_residues TDATPTLTPKPWISGIAPYVPGKSAGADGRPLIKLSANENPLGTGEKARAAFAAVQSAPDALSRYPDPGSVELRAAIAAK YGLDPDRVICGNGSDELLHLAAGTYAGPGDEILYVRYGFAVYEIAARRVGAVPVEADDRDFATDVDALLAAVTDRTRVVY LANPNNPTGTLATREEVGRLYAGLPQNVLFVIDQAYAEYLTPDEDDGGLELAKTRPNVFVTRTFSKIHGLAAERIGWGYA SADVIAALHRIRLPFNVTRAGQAAAVAALGDDDFVNRSRAHNARWRAWLAAELESLGNHGVRVVPSATNFLLVLFEGAVS AETVYHRLMDAGYIVRWLPGQGIPQALRMTIGTEDETRGLATAIRAALAG
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=374, Percent_Identity=27.5401069518717, Blast_Score=109, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6322075, Length=389, Percent_Identity=26.9922879177378, Blast_Score=110, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_SPHAL (Q1GP30)
Other databases:
- EMBL: CP000356 - RefSeq: YP_617925.1 - ProteinModelPortal: Q1GP30 - SMR: Q1GP30 - GeneID: 4080680 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_2887 - NMPDR: fig|317655.9.peg.2748 - HOGENOM: HBG646350 - OMA: NPANILC - ProtClustDB: PRK02731 - BioCyc: SALA317655:SALA_2887-MONOMER - BRENDA: 2.6.1.9 - HAMAP: MF_01023 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 39548; Mature: 39417
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDATPTLTPKPWISGIAPYVPGKSAGADGRPLIKLSANENPLGTGEKARAAFAAVQSAP CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC DALSRYPDPGSVELRAAIAAKYGLDPDRVICGNGSDELLHLAAGTYAGPGDEILYVRYGF HHHHCCCCCCCEEEEEEEHHHCCCCCCEEEECCCCCCEEEEECCCCCCCCCCEEEEEECH AVYEIAARRVGAVPVEADDRDFATDVDALLAAVTDRTRVVYLANPNNPTGTLATREEVGR HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEECHHHHHH LYAGLPQNVLFVIDQAYAEYLTPDEDDGGLELAKTRPNVFVTRTFSKIHGLAAERIGWGY HHHCCCCHHEEEEEHHHHHHCCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHCCCC ASADVIAALHRIRLPFNVTRAGQAAAVAALGDDDFVNRSRAHNARWRAWLAAELESLGNH HHHHHHHHHHHHCCCCEECCCCCCEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHCCC GVRVVPSATNFLLVLFEGAVSAETVYHRLMDAGYIVRWLPGQGIPQALRMTIGTEDETRG CEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHEECCCCHHHHH LATAIRAALAG HHHHHHHHHCC >Mature Secondary Structure TDATPTLTPKPWISGIAPYVPGKSAGADGRPLIKLSANENPLGTGEKARAAFAAVQSAP CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC DALSRYPDPGSVELRAAIAAKYGLDPDRVICGNGSDELLHLAAGTYAGPGDEILYVRYGF HHHHCCCCCCCEEEEEEEHHHCCCCCCEEEECCCCCCEEEEECCCCCCCCCCEEEEEECH AVYEIAARRVGAVPVEADDRDFATDVDALLAAVTDRTRVVYLANPNNPTGTLATREEVGR HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEECHHHHHH LYAGLPQNVLFVIDQAYAEYLTPDEDDGGLELAKTRPNVFVTRTFSKIHGLAAERIGWGY HHHCCCCHHEEEEEHHHHHHCCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHCCCC ASADVIAALHRIRLPFNVTRAGQAAAVAALGDDDFVNRSRAHNARWRAWLAAELESLGNH HHHHHHHHHHHHCCCCEECCCCCCEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHCCC GVRVVPSATNFLLVLFEGAVSAETVYHRLMDAGYIVRWLPGQGIPQALRMTIGTEDETRG CEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHEECCCCHHHHH LATAIRAALAG HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA