Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488327

Identifier: 103488327

GI number: 103488327

Start: 3000185

End: 3000583

Strand: Reverse

Name: 103488327

Synonym: Sala_2850

Alternate gene names: NA

Gene position: 3000583-3000185 (Counterclockwise)

Preceding gene: 103488328

Following gene: 103488319

Centisome position: 89.7

GC content: 62.66

Gene sequence:

>399_bases
ATGAGCGCGCATCCCGGCCTCACCGCCTGGCACGCCTATATGGCGGACGGCGGCGATCCGCAGCGGTTGCGGAGCTTGCT
CGCCGACGATGCGGTCTTTCATTCGCCGGTCGTCCACACCCCGCAGGAAGGCGGCGACAAGGTTTTCGCCTATCTCCACG
CGGCGAGCCACGTTCTGGGCGGCGAGCATTTCCGCTATTTGCGCGAAATCGTCGATGGCGATCAGGCTTGCCTCGAATTT
CAGACCGAGCTCGACGGCATTCAGATCAACGGCGTCGACATCATCCGCTGGAACGACGCGGGCAAAATCGAGGATTTCAA
GGTGATGGTGCGCCCGCTCAAGGCCATCAACAAGGTCTGGGAAAAAATGGCCGCGATGCTCGCGGCGCAGGCGGGCTAG

Upstream 100 bases:

>100_bases
TCGACCATGGTTTCGCCGCGACGATGGGCAATCGCCGCAACGACGAAGGCGCGAGGCTCGCCGACGCTCGCACCCGCGCC
TTTTTCGCCGAGCATCTGGC

Downstream 100 bases:

>100_bases
ATCAGGCTGAGCCCGGCGAGTTCGCGATAGAGTTCGGGCGGCAGCTCGTCGATGCCGCTTCCATCCTCCAGCCCCTTGGG
CGCGTCGGCATCGGCCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NADH Flavin Oxidoreductase/NADH Oxidase

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSAHPGLTAWHAYMADGGDPQRLRSLLADDAVFHSPVVHTPQEGGDKVFAYLHAASHVLGGEHFRYLREIVDGDQACLEF
QTELDGIQINGVDIIRWNDAGKIEDFKVMVRPLKAINKVWEKMAAMLAAQAG

Sequences:

>Translated_132_residues
MSAHPGLTAWHAYMADGGDPQRLRSLLADDAVFHSPVVHTPQEGGDKVFAYLHAASHVLGGEHFRYLREIVDGDQACLEF
QTELDGIQINGVDIIRWNDAGKIEDFKVMVRPLKAINKVWEKMAAMLAAQAG
>Mature_131_residues
SAHPGLTAWHAYMADGGDPQRLRSLLADDAVFHSPVVHTPQEGGDKVFAYLHAASHVLGGEHFRYLREIVDGDQACLEFQ
TELDGIQINGVDIIRWNDAGKIEDFKVMVRPLKAINKVWEKMAAMLAAQAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14567; Mature: 14436

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAHPGLTAWHAYMADGGDPQRLRSLLADDAVFHSPVVHTPQEGGDKVFAYLHAASHVLG
CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
GEHFRYLREIVDGDQACLEFQTELDGIQINGVDIIRWNDAGKIEDFKVMVRPLKAINKVW
HHHHHHHHHHHCCHHHHHHHHHHCCCEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
EKMAAMLAAQAG
HHHHHHHHHCCC
>Mature Secondary Structure 
SAHPGLTAWHAYMADGGDPQRLRSLLADDAVFHSPVVHTPQEGGDKVFAYLHAASHVLG
CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
GEHFRYLREIVDGDQACLEFQTELDGIQINGVDIIRWNDAGKIEDFKVMVRPLKAINKVW
HHHHHHHHHHHCCHHHHHHHHHHCCCEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
EKMAAMLAAQAG
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA