| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488263
Identifier: 103488263
GI number: 103488263
Start: 2947967
End: 2948305
Strand: Direct
Name: 103488263
Synonym: Sala_2786
Alternate gene names: NA
Gene position: 2947967-2948305 (Clockwise)
Preceding gene: 103488262
Following gene: 103488265
Centisome position: 88.13
GC content: 69.62
Gene sequence:
>339_bases ATGCCGCTGTCGCCCGACACTGCCCGCGACCTTTTGCAAGCACGGCTCCGCGCGCTCGATGAGGAGGATGCACTGAGCCG CGAGGCGACGGCGCCGGTAAAACTGGAGCAAGACAGCGTCGGGCGCCTGTCGCGCATCGACGCGATGCAGATGCAGGCGA TGGCGCTTGCGCAGCAGCAACGGCGCGTCCGTCAGCGACGCCAGATCGAGGCCGCGCTCGCGCGGATCGGGACGGGCGAG TTCGGCTATTGCCTGGCCTGCGGCGAGGCGATTGCCGAGGCACGGCTGCGAAACAACCCGGCGGTCGCGACCTGCATCGC CTGCGCTGCCGGAACCTGA
Upstream 100 bases:
>100_bases TATGGTCACGGCCCGCTGCGCACGATGCTCGTCGGTAGCACGACGACCGAGATGATCCGGTCCTGCACCATCCCGGTGCT GCTGTTCCGCTGACCCCGCG
Downstream 100 bases:
>100_bases CTTCTCCGGCGCCTAAGCCGCCACCACTTCCTCGCTCTGACTGGTTGCCGCTTCCAGCAGGCGTTTCTCCAATGTCTTGA CCCGCGCCGGGCTGTCGATC
Product: TraR/DksA family transcriptional regulator
Products: NA
Alternate protein names: TraR/DksA Family Transcriptional Regulator
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MPLSPDTARDLLQARLRALDEEDALSREATAPVKLEQDSVGRLSRIDAMQMQAMALAQQQRRVRQRRQIEAALARIGTGE FGYCLACGEAIAEARLRNNPAVATCIACAAGT
Sequences:
>Translated_112_residues MPLSPDTARDLLQARLRALDEEDALSREATAPVKLEQDSVGRLSRIDAMQMQAMALAQQQRRVRQRRQIEAALARIGTGE FGYCLACGEAIAEARLRNNPAVATCIACAAGT >Mature_111_residues PLSPDTARDLLQARLRALDEEDALSREATAPVKLEQDSVGRLSRIDAMQMQAMALAQQQRRVRQRRQIEAALARIGTGEF GYCLACGEAIAEARLRNNPAVATCIACAAGT
Specific function: Unknown
COG id: COG1734
COG function: function code T; DnaK suppressor protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12154; Mature: 12023
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: PS51128 ZF_DKSA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSPDTARDLLQARLRALDEEDALSREATAPVKLEQDSVGRLSRIDAMQMQAMALAQQQ CCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHH RRVRQRRQIEAALARIGTGEFGYCLACGEAIAEARLRNNPAVATCIACAAGT HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure PLSPDTARDLLQARLRALDEEDALSREATAPVKLEQDSVGRLSRIDAMQMQAMALAQQQ CCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHH RRVRQRRQIEAALARIGTGEFGYCLACGEAIAEARLRNNPAVATCIACAAGT HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA