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The map label for this gene is cycH [H]

Identifier: 103488249

GI number: 103488249

Start: 2926565

End: 2927515

Strand: Direct

Name: cycH [H]

Synonym: Sala_2772

Alternate gene names: 103488249

Gene position: 2926565-2927515 (Clockwise)

Preceding gene: 103488243

Following gene: 103488251

Centisome position: 87.49

GC content: 71.29

Gene sequence:

>951_bases
ATGAGCGAGAGCAACGGCATGCAGGCAGGGAAAGCGGTCGGACTGAGCCGCGCCAACCGCGCGATACTGATCGCCGCCTT
CGTGCTGCTCGCCGCCGCAGTCGGCTATGCGATCTGGCGCGATTCGGCGCCCGCCATCGCCGATCCGGCGATCGAAGGGG
GCGCGGCGCCGGGTGACCAGATCGCCGCGCTGGAGGCGCGCGTACAGCGCGAGCCGGACAGCGCCGATGCCTGGACGGCG
CTCGGCGCGGCGCGTTTCGACATGGGCAATTTCGTCGGCGCCGCAGCGGCCTATGAAAAAGCCGTGGCGCTGTCGCCCGA
ATCGGCGGGGCTCTGGTCGGCGCTGGGCGAAGCGCGCGTGATGGCGAGCGAGCGCGATCCGATGCCCGCCGCCGCCGTGC
AAGCCTTCGACAAGGCGATCGCACTCGACGCCAGGGACCCGCGCGCGCGCTATTTCCTCGCGGTGAAAAAGGATATCGGC
GGCGATCACAAGGGCGCGATCGAGGACTGGTTCGCGCTGCTCGCCGACACGCCGCAGGGCGCACCGTGGGAGGCCGACCT
GCGCCGCACGATCGAACAGGTCGGTGCGATCCACAAGATCGACGTCGCGCAGCGCCTCGCCGCGACGCGGCCGCGCGCGC
CGACCGCCGACGAAATGCCTGTCGCCGCGCGCGCGATCCCGGGACCGAGCCGTGCCGAGATGGAGGCCGCCGCGCAGCTC
CCCAAGGGGCAGCAGGATGCGATGATCGCGGGCATGGTCGACGGGCTGGAGGCCAAGCTCAGGGCCAATCCCGCCGATGT
CGACCGCTGGATCATGCTGATGCGCAGCCGCATGACGCTGGGGGAGACGGCAAAGGCGGCGCAGGCGCTGAAGGACGGGA
TTGCGGCGAATCCGGCGGCGGCAGGACGGCTGAAGGCGCAGGCGCAATTGCTCGGCGTGCCCGGCGCATAG

Upstream 100 bases:

>100_bases
GATTTTGTCGTTGACCGACCTCGTGGGTCCAAGGCTACACCATCGCCCGGCAAAGGCAATATGGCGCGCAGCGCGCCGGC
CATTTTTCGCGGGGGCAAAA

Downstream 100 bases:

>100_bases
GCGGACTTGGCGTCAAGCCGTCAAAGGCGTATGATAAGGGCGCTGCGGGGGGCAACCAGAACAATGGGTCGCCGCGGCAC
CAATGCCGCGAGACGCTTTC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSESNGMQAGKAVGLSRANRAILIAAFVLLAAAVGYAIWRDSAPAIADPAIEGGAAPGDQIAALEARVQREPDSADAWTA
LGAARFDMGNFVGAAAAYEKAVALSPESAGLWSALGEARVMASERDPMPAAAVQAFDKAIALDARDPRARYFLAVKKDIG
GDHKGAIEDWFALLADTPQGAPWEADLRRTIEQVGAIHKIDVAQRLAATRPRAPTADEMPVAARAIPGPSRAEMEAAAQL
PKGQQDAMIAGMVDGLEAKLRANPADVDRWIMLMRSRMTLGETAKAAQALKDGIAANPAAAGRLKAQAQLLGVPGA

Sequences:

>Translated_316_residues
MSESNGMQAGKAVGLSRANRAILIAAFVLLAAAVGYAIWRDSAPAIADPAIEGGAAPGDQIAALEARVQREPDSADAWTA
LGAARFDMGNFVGAAAAYEKAVALSPESAGLWSALGEARVMASERDPMPAAAVQAFDKAIALDARDPRARYFLAVKKDIG
GDHKGAIEDWFALLADTPQGAPWEADLRRTIEQVGAIHKIDVAQRLAATRPRAPTADEMPVAARAIPGPSRAEMEAAAQL
PKGQQDAMIAGMVDGLEAKLRANPADVDRWIMLMRSRMTLGETAKAAQALKDGIAANPAAAGRLKAQAQLLGVPGA
>Mature_315_residues
SESNGMQAGKAVGLSRANRAILIAAFVLLAAAVGYAIWRDSAPAIADPAIEGGAAPGDQIAALEARVQREPDSADAWTAL
GAARFDMGNFVGAAAAYEKAVALSPESAGLWSALGEARVMASERDPMPAAAVQAFDKAIALDARDPRARYFLAVKKDIGG
DHKGAIEDWFALLADTPQGAPWEADLRRTIEQVGAIHKIDVAQRLAATRPRAPTADEMPVAARAIPGPSRAEMEAAAQLP
KGQQDAMIAGMVDGLEAKLRANPADVDRWIMLMRSRMTLGETAKAAQALKDGIAANPAAAGRLKAQAQLLGVPGA

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG4235

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017560
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32873; Mature: 32742

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESNGMQAGKAVGLSRANRAILIAAFVLLAAAVGYAIWRDSAPAIADPAIEGGAAPGDQ
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
IAALEARVQREPDSADAWTALGAARFDMGNFVGAAAAYEKAVALSPESAGLWSALGEARV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHH
MASERDPMPAAAVQAFDKAIALDARDPRARYFLAVKKDIGGDHKGAIEDWFALLADTPQG
HHCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCC
APWEADLRRTIEQVGAIHKIDVAQRLAATRPRAPTADEMPVAARAIPGPSRAEMEAAAQL
CCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHC
PKGQQDAMIAGMVDGLEAKLRANPADVDRWIMLMRSRMTLGETAKAAQALKDGIAANPAA
CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCH
AGRLKAQAQLLGVPGA
HHHHHHHHHEECCCCC
>Mature Secondary Structure 
SESNGMQAGKAVGLSRANRAILIAAFVLLAAAVGYAIWRDSAPAIADPAIEGGAAPGDQ
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
IAALEARVQREPDSADAWTALGAARFDMGNFVGAAAAYEKAVALSPESAGLWSALGEARV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHH
MASERDPMPAAAVQAFDKAIALDARDPRARYFLAVKKDIGGDHKGAIEDWFALLADTPQG
HHCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCC
APWEADLRRTIEQVGAIHKIDVAQRLAATRPRAPTADEMPVAARAIPGPSRAEMEAAAQL
CCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHC
PKGQQDAMIAGMVDGLEAKLRANPADVDRWIMLMRSRMTLGETAKAAQALKDGIAANPAA
CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCH
AGRLKAQAQLLGVPGA
HHHHHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8231805; 12597275 [H]