Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is 103488185

Identifier: 103488185

GI number: 103488185

Start: 2855573

End: 2855875

Strand: Direct

Name: 103488185

Synonym: Sala_2708

Alternate gene names: NA

Gene position: 2855573-2855875 (Clockwise)

Preceding gene: 103488183

Following gene: 103488186

Centisome position: 85.36

GC content: 64.03

Gene sequence:

>303_bases
ATGGTCAAACGCTCGCCACTCGACAATCGCGACACGTCGAATATCGCCTGGGCACGCTACCGTCGGCTGATGAAGGGCAT
GGCGCTCGTCTCGCTTGCCGCCGTCGTCGGCGCGCTCGGCTGGCTGCGCCTGACGCTGGGCGAGGCGCTGACGATCCATA
TGATCATCGCAACCGCCGCGGGCATCGGCCTGTCGGTGATGCTCGGCGCGGCGTTGATGGGACTTGTGTTCCTGTCGAGC
GGCAGCGGCCACGACGAATCGATCGAAGACCCGTTTGAAGACGACCCGGATTGGAAAGCATGA

Upstream 100 bases:

>100_bases
TGATGCCAGCGAAGCCTAGCATGATTCGCGCGCCGAACGAAACGTCCTGGCCAGGGCAAAGCTGCTTGGCCCCGACCGCC
GCTTGGTCCATGGAAGCGCG

Downstream 100 bases:

>100_bases
CCAAAACCACCCCCTCCCACGCCCCGCGCGACCCGATCCTGCGCGTCGTCCCGCGTCCCGCCGACATCAACGCCAACGGG
CATATCTTCGGCGGCTGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MVKRSPLDNRDTSNIAWARYRRLMKGMALVSLAAVVGALGWLRLTLGEALTIHMIIATAAGIGLSVMLGAALMGLVFLSS
GSGHDESIEDPFEDDPDWKA

Sequences:

>Translated_100_residues
MVKRSPLDNRDTSNIAWARYRRLMKGMALVSLAAVVGALGWLRLTLGEALTIHMIIATAAGIGLSVMLGAALMGLVFLSS
GSGHDESIEDPFEDDPDWKA
>Mature_100_residues
MVKRSPLDNRDTSNIAWARYRRLMKGMALVSLAAVVGALGWLRLTLGEALTIHMIIATAAGIGLSVMLGAALMGLVFLSS
GSGHDESIEDPFEDDPDWKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10713; Mature: 10713

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRSPLDNRDTSNIAWARYRRLMKGMALVSLAAVVGALGWLRLTLGEALTIHMIIATAA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIGLSVMLGAALMGLVFLSSGSGHDESIEDPFEDDPDWKA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVKRSPLDNRDTSNIAWARYRRLMKGMALVSLAAVVGALGWLRLTLGEALTIHMIIATAA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIGLSVMLGAALMGLVFLSSGSGHDESIEDPFEDDPDWKA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA